Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92425 | Soybean | nucleus | 65.14 | 66.67 |
| Os03t0741700-00 | Rice | cytosol | 14.45 | 32.81 |
| KRG95629 | Soybean | nucleus | 32.11 | 32.71 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 29.36 | 32.16 |
| KRH67309 | Soybean | nucleus | 32.8 | 32.13 |
| KRH34095 | Soybean | nucleus | 31.42 | 31.71 |
| KRG92687 | Soybean | nucleus | 31.19 | 31.41 |
| KRH32110 | Soybean | nucleus | 29.13 | 29.6 |
| KRH71326 | Soybean | mitochondrion, nucleus | 29.13 | 29.47 |
| VIT_05s0020g04730.t01 | Wine grape | nucleus | 31.65 | 29.11 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 28.21 | 27.95 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 23.39 | 26.22 |
| Solyc01g020110.1.1 | Tomato | endoplasmic reticulum | 8.72 | 25.33 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 21.56 | 25.07 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 21.56 | 25.07 |
| CDY61240 | Canola | nucleus | 10.32 | 25.0 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 26.38 | 24.36 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 26.38 | 24.26 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 26.15 | 24.15 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 19.04 | 24.13 |
| KXG37982 | Sorghum | nucleus | 28.21 | 23.84 |
| Zm00001d030985_P001 | Maize | nucleus | 25.92 | 23.74 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 21.56 | 23.5 |
| HORVU5Hr1G094160.2 | Barley | plastid | 23.85 | 23.48 |
| PGSC0003DMT400087291 | Potato | nucleus | 16.74 | 23.47 |
| Zm00001d041405_P001 | Maize | nucleus | 26.15 | 23.46 |
| Zm00001d013303_P001 | Maize | nucleus | 20.87 | 23.39 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 27.52 | 23.26 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 27.75 | 23.22 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 25.0 | 23.09 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 26.83 | 23.03 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 25.69 | 22.95 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 27.29 | 22.88 |
| Zm00001d033322_P001 | Maize | nucleus | 27.06 | 22.43 |
| OQU79520 | Sorghum | nucleus | 26.38 | 20.83 |
| Os03t0632800-01 | Rice | nucleus | 19.72 | 19.91 |
| PGSC0003DMT400010761 | Potato | nucleus | 21.79 | 19.23 |
| Solyc09g083300.1.1 | Tomato | nucleus, plastid | 11.24 | 18.35 |
| Zm00001d033967_P001 | Maize | nucleus | 15.14 | 17.28 |
| Solyc09g083310.1.1 | Tomato | nucleus | 15.83 | 17.25 |
| PGSC0003DMT400015657 | Potato | nucleus, plastid | 15.14 | 16.71 |
| PGSC0003DMT400087288 | Potato | plastid | 6.19 | 16.27 |
Protein Annotations
| EntrezGene:100780935 | MapMan:12.3.5.1.1.1 | Gene3D:3.30.40.10 | EMBL:ACUP02006594 | EnsemblPlantsGene:GLYMA_10G180300 | UniProt:I1LC47 |
| InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH34379 | ProteinID:KRH34379 | ProteinID:KRH34379.1 | PFAM:PF13923 |
| ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF42 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI000233D371 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:41398806..41402748
Molecular Weight (calculated)
48199.3 Da
IEP (calculated)
8.946
GRAVY (calculated)
-0.672
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVSLSETET DIKTITMGAA KLNYEKVSAC VTCPLCNKFF RNATTISECC HSFCRECVDK KLIDEKLKHC PICNRDLGCS PHDKLRPDPC LQDLRDKIFP
101: LEEQNASVKL NINRKKNSPS LLKNNTKIDK AASKPDKAED EKRGEVEALE EVSSYTIGSA RRAKAAARLK FTRSAPPPSC QLDKVGGEEK KDGGLPPGET
201: SNGSLKIKIP NSSKANSSQQ PETNKRDNSE LRNEMADMFE PLNSLVEPGS KKPRKKSTMQ ENTVTPIVRS HDNAADQNES TPSNSDSVQH QRPLRTQEKT
301: FRISEDLNFP AQPEIGSNIK SNKEFGPIWF CLVAAEEKKA SARLPQLSSS YLRVKDGSVT VSYIKKYLVK KLGLGSEAEV EITLQGRALL SSLQLRNLVD
401: MWLQTVPKNG IQASVGSSAK DFIMVLSYGR KACDTS
101: LEEQNASVKL NINRKKNSPS LLKNNTKIDK AASKPDKAED EKRGEVEALE EVSSYTIGSA RRAKAAARLK FTRSAPPPSC QLDKVGGEEK KDGGLPPGET
201: SNGSLKIKIP NSSKANSSQQ PETNKRDNSE LRNEMADMFE PLNSLVEPGS KKPRKKSTMQ ENTVTPIVRS HDNAADQNES TPSNSDSVQH QRPLRTQEKT
301: FRISEDLNFP AQPEIGSNIK SNKEFGPIWF CLVAAEEKKA SARLPQLSSS YLRVKDGSVT VSYIKKYLVK KLGLGSEAEV EITLQGRALL SSLQLRNLVD
401: MWLQTVPKNG IQASVGSSAK DFIMVLSYGR KACDTS
001: MMIKVKKETM RACLSCSICD NILRDATTIS ECLHTFCRKC IYEKITEDEI ETCPVCNIDL GSTPLEKLRP DHNLQDLRAK IFALKRRKVK APGIVSLPGK
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
101: RKERSISSLV VSTPMVSAQA GTTRRRTKAP TRKELRNGSL AERTVKKEES SGDELLESTS SPDTLNKFTQ NKRQSKKSCK ESISNKENKD GDEPWDSKMD
201: WKPLNFLVEV ANGTKPLKSS ASQGSGSKSE HANVSRNQFQ GSKTKTKNKK RKCKREDDKS NNGDPTTSET VTPKRMRTTQ RKRSATTLGD SRNLPQPDES
301: SAKQERRNGP VWFSLVASND QEGGTSLPQI PANFLRIRDG NTTVSFIQKY LMRKLDLESE NEIEIKCMGE AVIPTLTLYN LVDLWLQKSS NHQRFAALVG
401: SSAKDFTMVL VYARKLPECN M
Arabidopsis Description
DRIP1E3 ubiquitin protein ligase DRIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9Y4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.