Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g083310.1.1 | Tomato | nucleus | 44.81 | 44.25 |
| PGSC0003DMT400087291 | Potato | nucleus | 27.09 | 34.41 |
| PGSC0003DMT400087288 | Potato | plastid | 12.15 | 28.92 |
| CDY61240 | Canola | nucleus | 11.39 | 25.0 |
| PGSC0003DMT400013629 | Potato | nucleus | 18.23 | 24.57 |
| PGSC0003DMT400010761 | Potato | nucleus | 30.13 | 24.09 |
| PGSC0003DMT400038984 | Potato | nucleus | 22.28 | 20.47 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 20.51 | 20.35 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 17.72 | 20.35 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 21.01 | 18.86 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 23.8 | 18.22 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 23.29 | 18.11 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 23.8 | 18.08 |
| PGSC0003DMT400051660 | Potato | nucleus | 20.25 | 17.7 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 22.78 | 17.27 |
| VIT_05s0020g04730.t01 | Wine grape | nucleus | 20.0 | 16.67 |
| KRG92425 | Soybean | nucleus | 17.72 | 16.43 |
| Zm00001d030985_P001 | Maize | nucleus | 19.75 | 16.39 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 14.94 | 15.73 |
| KXG37982 | Sorghum | nucleus | 20.51 | 15.7 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 14.68 | 15.47 |
| Zm00001d033322_P001 | Maize | nucleus | 20.51 | 15.4 |
| KRH34379 | Soybean | nucleus | 16.71 | 15.14 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 17.72 | 14.83 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 17.47 | 14.62 |
| Zm00001d041405_P001 | Maize | nucleus | 17.72 | 14.4 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 14.18 | 14.4 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 17.22 | 14.35 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 16.96 | 14.19 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 17.22 | 13.93 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 13.92 | 13.75 |
| HORVU5Hr1G094160.2 | Barley | plastid | 14.18 | 12.64 |
| OQU79520 | Sorghum | nucleus | 16.46 | 11.78 |
| Os03t0632800-01 | Rice | nucleus | 11.65 | 10.65 |
| Zm00001d013303_P001 | Maize | nucleus | 9.11 | 9.25 |
| Os03t0741700-00 | Rice | cytosol | 3.8 | 7.81 |
| Zm00001d033967_P001 | Maize | nucleus | 7.34 | 7.59 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400015657 | EnsemblPlantsGene:PGSC0003DMG400006109 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF70 | PGSC:PGSC0003DMG400006109 | SEG:seg |
| UniParc:UPI0002948CDB | UniProt:M1A6C8 | MapMan:35.1 | : | : | : |
Description
Ring finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400006109]
Coordinates
chr9:-:55379880..55382354
Molecular Weight (calculated)
43183.6 Da
IEP (calculated)
8.597
GRAVY (calculated)
-0.771
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIDPSPPPA PAPIVIATSS RRKEKLISSI VNTTPLVDDQ VSNQDNVSSS STGRGRGRGR GRGRRRRRGS SQNNANDVDL SNGDTHPGSL IIPILSSKDA
101: QHKQQVESIA YAAESSKKNK SIEPLYGIND VWEPLNKLVT KGDTLDNSEE PVPKFISSTP QFNLDDYENE EDNDDDEEDD EYVPSPTVKE HKVRQQNVVK
201: KLDAVQSIEA PSSSNNNNTD KGKGKKGRRG RKKKETNNPL SPPPVSSGGD GDGGGGTNLN VAQVEAAIEI EGGTISGSTR VVNERVHPIW FTLVACDKQT
301: CPLPLPQISS RYIKIKDVNK SSSYIKKYLA HKLSLQSEDE VEIRMLGMQI QPTFSLKNLA ELWLRVGPNS GKNLAKVGAS AQEFVMILNY SRAHP
101: QHKQQVESIA YAAESSKKNK SIEPLYGIND VWEPLNKLVT KGDTLDNSEE PVPKFISSTP QFNLDDYENE EDNDDDEEDD EYVPSPTVKE HKVRQQNVVK
201: KLDAVQSIEA PSSSNNNNTD KGKGKKGRRG RKKKETNNPL SPPPVSSGGD GDGGGGTNLN VAQVEAAIEI EGGTISGSTR VVNERVHPIW FTLVACDKQT
301: CPLPLPQISS RYIKIKDVNK SSSYIKKYLA HKLSLQSEDE VEIRMLGMQI QPTFSLKNLA ELWLRVGPNS GKNLAKVGAS AQEFVMILNY SRAHP
001: MLTKVLSKEV KPCLACPICT NPFKDATTIS ECLHTFCRSC IRNKFINERV NACPVCNVNL GVFPLEKLRS DCTWQDLKLK IYRAMMESLK KAGPKTVAAS
101: VKSSKKKRKS RTSLRVSSSR VSSSPDTPLE PANVVVEPPN VVVEEKHRET VLALQSTRKP IITFQKRGRK ASLPKKIDSK PEPELPPKEP KIKNLFDLNN
201: EPEDNGLDEA EGSTFQEVVP KEKDLCKPIF SLSVTLNIND TPPDIVEPEI SSDDDTEESV EPIQNKCVVN RETKEVPVQV NQNSLLISSD RDREDNSGQK
301: LKTNGAATSR SRKKKGKKPV EKSYSLRPRI GRRTVNPAAG TTTPEAPVSV EEEMKVEEGR NNNPVWFSLK PSKTQNIEML LPPITACCIR VKDSNMTVSY
401: LKKYLMVKLG LESEDQVEIW LRDEPVCSSL TLHNLVDWWV QTTPLPERQS AMVGSSAAEF IMDLYYSFKS DASDSGSASE
101: VKSSKKKRKS RTSLRVSSSR VSSSPDTPLE PANVVVEPPN VVVEEKHRET VLALQSTRKP IITFQKRGRK ASLPKKIDSK PEPELPPKEP KIKNLFDLNN
201: EPEDNGLDEA EGSTFQEVVP KEKDLCKPIF SLSVTLNIND TPPDIVEPEI SSDDDTEESV EPIQNKCVVN RETKEVPVQV NQNSLLISSD RDREDNSGQK
301: LKTNGAATSR SRKKKGKKPV EKSYSLRPRI GRRTVNPAAG TTTPEAPVSV EEEMKVEEGR NNNPVWFSLK PSKTQNIEML LPPITACCIR VKDSNMTVSY
401: LKKYLMVKLG LESEDQVEIW LRDEPVCSSL TLHNLVDWWV QTTPLPERQS AMVGSSAAEF IMDLYYSFKS DASDSGSASE
Arabidopsis Description
Probable E3 ubiquitin protein ligase DRIPH [Source:UniProtKB/Swiss-Prot;Acc:Q9LS86]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.