Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0141g00610.t01 | Wine grape | nucleus | 51.48 | 56.74 |
| VIT_14s0081g00070.t01 | Wine grape | nucleus | 46.62 | 49.22 |
| GSMUA_Achr9P10710_001 | Banana | nucleus | 39.03 | 46.48 |
| Os03t0741700-00 | Rice | cytosol | 17.93 | 44.27 |
| GSMUA_Achr5P03230_001 | Banana | nucleus | 38.61 | 41.59 |
| GSMUA_Achr4P17750_001 | Banana | nucleus | 33.97 | 41.39 |
| Os12t0600200-03 | Rice | cytosol, nucleus | 26.58 | 36.63 |
| TraesCS5B01G382100.1 | Wheat | nucleus | 39.24 | 36.05 |
| HORVU5Hr1G093720.3 | Barley | nucleus | 39.45 | 35.89 |
| TraesCS5D01G069800.1 | Wheat | nucleus | 35.65 | 35.81 |
| HORVU5Hr1G014430.6 | Barley | nucleus | 35.65 | 35.65 |
| TraesCS5A01G378600.1 | Wheat | nucleus | 38.19 | 35.63 |
| TraesCS5A01G058000.1 | Wheat | nucleus | 35.23 | 35.38 |
| TraesCS5D01G388500.1 | Wheat | nucleus | 38.4 | 35.0 |
| TraesCS5B01G065600.1 | Wheat | cytosol | 34.39 | 34.53 |
| KXG37982 | Sorghum | nucleus | 37.55 | 34.5 |
| KRG92425 | Soybean | nucleus | 30.8 | 34.27 |
| Zm00001d041405_P001 | Maize | nucleus | 34.81 | 33.95 |
| Zm00001d033322_P001 | Maize | nucleus | 37.55 | 33.84 |
| Zm00001d030985_P001 | Maize | nucleus | 33.76 | 33.61 |
| Os03t0632800-01 | Rice | nucleus | 29.96 | 32.87 |
| TraesCS5D01G391100.1 | Wheat | mitochondrion | 25.11 | 31.73 |
| TraesCS5A01G381800.1 | Wheat | mitochondrion | 25.11 | 31.73 |
| KRH34379 | Soybean | nucleus | 29.11 | 31.65 |
| TraesCS5B01G385300.1 | Wheat | mitochondrion | 25.74 | 30.5 |
| Solyc01g020110.1.1 | Tomato | endoplasmic reticulum | 9.28 | 29.33 |
| OQU79520 | Sorghum | nucleus | 33.54 | 28.8 |
| HORVU5Hr1G094160.2 | Barley | plastid | 26.58 | 28.44 |
| CDY61240 | Canola | nucleus | 10.76 | 28.33 |
| Zm00001d013303_P001 | Maize | nucleus | 23.21 | 28.28 |
| KXG37592 | Sorghum | mitochondrion, nucleus | 28.48 | 27.66 |
| Zm00001d033967_P001 | Maize | nucleus | 21.52 | 26.7 |
| PGSC0003DMT400087291 | Potato | nucleus | 17.09 | 26.05 |
| PGSC0003DMT400010761 | Potato | nucleus | 23.42 | 22.47 |
| Solyc09g083300.1.1 | Tomato | nucleus, plastid | 12.45 | 22.1 |
| PGSC0003DMT400087288 | Potato | plastid | 7.59 | 21.69 |
| PGSC0003DMT400015657 | Potato | nucleus, plastid | 16.67 | 20.0 |
| Solyc09g083310.1.1 | Tomato | nucleus | 16.46 | 19.5 |
Protein Annotations
| EntrezGene:100245936 | wikigene:100245936 | MapMan:12.3.5.1.1.1 | Gene3D:3.30.40.10 | ProteinID:CBI26361 | ProteinID:CBI26361.3 |
| UniProt:D7T790 | EMBL:FN595749 | InterPro:IPR001841 | InterPro:IPR013083 | EntrezGene:LOC100245936 | wikigene:LOC100245936 |
| PFAM:PF13923 | ScanProsite:PS00518 | PFscan:PS50089 | PANTHER:PTHR10825 | PANTHER:PTHR10825:SF42 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0001BE2E41 | ArrayExpress:VIT_05s0020g04730 | EnsemblPlantsGene:VIT_05s0020g04730 | EnsemblPlants:VIT_05s0020g04730.t01 | unigene:Vvi.19736 |
| RefSeq:XP_002280186 | RefSeq:XP_002280186.2 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg |
Description
No Description!
Coordinates
chr5:+:6592179..6599675
Molecular Weight (calculated)
52217.2 Da
IEP (calculated)
8.874
GRAVY (calculated)
-0.619
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MCAAEDSLHT RNTEAKNSGL QVRRLDGGTP AAHANAKIPP CFGVWMMSGP VAKVPRERLA ACMTCRICNK LFDDATTISE CLHTFCRKCI FDKITEDELD
101: YCPVCNTNLG CAPLEKLRPD HNLQDLTAKI FPSEKSKVVA TEEVASVPLP ARRKERSLSS LGVSTPRVSS QTVMTGKRTK SAARRLSAAR ESTFPVEEPI
201: KKEEDYPENP SSPEILNKRA QNKKNLKENY SSAESSKQHI NKGKEENSET LKEKDDMWKP LNCLVEACSG TKSNKLNLQG SLAKSTPSHV DDKEAHVPKA
301: KLKERGKLKF QDEENGTTHV PSGSVKPRIR GGRQKKAATP EGFSIPALAE NDGNSKCNIR ACPVWFSLVA SDNQEGDAPL PQIPSSYLRM RDGHLPVSFL
401: QKYLVQKLHL NSESEVEITL RGQPVVPTLQ LQSLVDLWFQ AAAPTTSEAT QPPIGSSAKE FVMVLSYGRK PKTP
101: YCPVCNTNLG CAPLEKLRPD HNLQDLTAKI FPSEKSKVVA TEEVASVPLP ARRKERSLSS LGVSTPRVSS QTVMTGKRTK SAARRLSAAR ESTFPVEEPI
201: KKEEDYPENP SSPEILNKRA QNKKNLKENY SSAESSKQHI NKGKEENSET LKEKDDMWKP LNCLVEACSG TKSNKLNLQG SLAKSTPSHV DDKEAHVPKA
301: KLKERGKLKF QDEENGTTHV PSGSVKPRIR GGRQKKAATP EGFSIPALAE NDGNSKCNIR ACPVWFSLVA SDNQEGDAPL PQIPSSYLRM RDGHLPVSFL
401: QKYLVQKLHL NSESEVEITL RGQPVVPTLQ LQSLVDLWFQ AAAPTTSEAT QPPIGSSAKE FVMVLSYGRK PKTP
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.