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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 5
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g020110.1.1 Tomato endoplasmic reticulum 27.72 49.33
PGSC0003DMT400087291 Potato nucleus 31.09 26.69
Solyc09g083310.1.1 Tomato nucleus 31.09 20.75
Os12t0600200-03 Rice cytosol, nucleus 19.85 15.41
GSMUA_Achr9P10710_001 Banana nucleus 22.47 15.08
Solyc09g065990.2.1 Tomato nucleus 23.6 14.65
CDY61240 Canola nucleus 9.74 14.44
Solyc06g008600.2.1 Tomato nucleus 22.47 14.35
GSMUA_Achr5P03230_001 Banana nucleus 22.85 13.86
Solyc06g084040.2.1 Tomato nucleus 22.1 13.69
VIT_05s0020g04730.t01 Wine grape nucleus 22.1 12.45
TraesCS5D01G069800.1 Wheat nucleus 21.72 12.29
TraesCS5A01G058000.1 Wheat nucleus 21.72 12.29
HORVU5Hr1G014430.6 Barley nucleus 21.35 12.03
TraesCS5A01G381800.1 Wheat mitochondrion 16.85 12.0
TraesCS5D01G391100.1 Wheat mitochondrion 16.85 12.0
KRG92425 Soybean nucleus 19.1 11.97
Zm00001d041405_P001 Maize nucleus 21.35 11.73
TraesCS5B01G065600.1 Wheat cytosol 20.6 11.65
TraesCS5B01G382100.1 Wheat nucleus 22.47 11.63
TraesCS5A01G378600.1 Wheat nucleus 22.1 11.61
Os03t0741700-00 Rice cytosol 8.24 11.46
TraesCS5D01G388500.1 Wheat nucleus 22.1 11.35
Zm00001d030985_P001 Maize nucleus 20.22 11.34
HORVU5Hr1G093720.3 Barley nucleus 22.1 11.32
KXG37592 Sorghum mitochondrion, nucleus 20.6 11.27
TraesCS5B01G385300.1 Wheat mitochondrion 16.85 11.25
KXG37982 Sorghum nucleus 21.72 11.24
KRH34379 Soybean nucleus 18.35 11.24
Zm00001d033322_P001 Maize nucleus 21.72 11.03
HORVU5Hr1G094160.2 Barley plastid 17.98 10.84
GSMUA_Achr4P17750_001 Banana nucleus 15.73 10.8
OQU79520 Sorghum nucleus 20.6 9.96
Zm00001d013303_P001 Maize nucleus 12.73 8.74
Zm00001d033967_P001 Maize nucleus 9.36 6.54
Os03t0632800-01 Rice nucleus 10.11 6.25
Protein Annotations
EnsemblPlants:Solyc09g083300.1.1EnsemblPlantsGene:Solyc09g083300.1PANTHER:PTHR10825PANTHER:PTHR10825:SF70SEG:segUniParc:UPI000276C734
UniProt:K4CVV6MapMan:35.2::::
Description
No Description!
Coordinates
chr9:-:68975705..68977338
Molecular Weight (calculated)
29972.5 Da
IEP (calculated)
9.796
GRAVY (calculated)
-0.761
Length
267 amino acids
Sequence
(BLAST)
001: MDTLPLPPPP TPLVVGTSLR RKEKPISSTK NATPLLHDDQ LLNQQNISNS STGRERGRGR GRGRGRRVCS QNDANIDPFQ DPSIFNDVVD LNKGNTHPGS
101: LTQHNQQIKG DQPRSSSVHL LSVKATQLNQ EVESSVYVDD SSKSDSISNK DTSIEPFNRK NDLSKARAVN EDHHLWFTLI ACDKQDVNKP SSYIKKYLAQ
201: KLSLQSEDEV ELRMLGMLIR PELPLKHLEK LWLRVAPHSA KNSITVEASA QEFVMVLKYS RSHPKLN
Best Arabidopsis Sequence Match ( AT2G30580.2 )
(BLAST)
001: MEGDMVAKVK RETVVACMTC PLCDKLLRDA TTISECLHTF CRKCIYEKIT EDEIESCPVC DIDLGGTPLE KLRPDHILQD LRAKLFPLKR KKERAPEVVS
101: SISLPAKRKE RSISSLVVST PRVSAQAGTT GKRTKAATRK DVRGSGSFTK RTVKKEEEFG DDHVESASSP ETLKKFTQNK RQSSYANPNQ SLSNRRNKDV
201: DEPWDSKLHL WKPLNFLVDV ANGTKDPKSE LGNASHNDVQ GSKTKTKDHK RKCKLEEEIS NNGDPTTSET ATLKRTRRTR RKRSSTFGDS RIPLLPGAAS
301: LKQERRNGHV WFSLVASSNQ EGEASLPQIP ANYLRIRDGN IPVSFIQKYL MRKLDLKSED EVEITCMGEP VIPTLQLHSL VDLWLETTSK HQRVAASIGS
401: SAKEFVMVLV YSRKLPECNN
Arabidopsis Description
DRIP2DRIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VRI3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.