Factsheet for Solyc07g062290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018283	Potato	cytosol	93.04	93.04
KRH27369	Soybean	cytosol	73.91	74.56
VIT_19s0014g01000.t01	Wine grape	cytosol	73.04	73.68
Solyc03g006020.2.1	Tomato	cytosol, mitochondrion, nucleus	69.57	72.07
GSMUA_Achr7P24870_001	Banana	cytosol	65.22	71.43
AT1G53400.1	Thale cress	cytosol	70.43	71.05
Bra038123.1-P	Field mustard	cytosol	69.57	70.18
CDY60203	Canola	cytosol	69.57	70.18
KXG22390	Sorghum	cytosol	66.96	68.14
Solyc02g072100.2.1	Tomato	cytosol	66.96	67.54
GSMUA_Achr3P31840_001	Banana	cytosol	68.7	67.52
Zm00001d043565_P001	Maize	cytosol	65.22	66.37
TraesCS1D01G352200.1	Wheat	cytosol	65.22	66.37
TraesCS1A01G349000.1	Wheat	cytosol	65.22	66.37
HORVU1Hr1G081490.1	Barley	cytosol	65.22	66.37
EES03565	Sorghum	cytosol	65.22	66.37
Bra039670.1-P	Field mustard	cytosol	65.22	65.79
CDY24097	Canola	cytosol	65.22	65.79
Os09t0345000-02	Rice	cytosol	66.09	65.52
HORVU3Hr1G069400.1	Barley	cytosol	64.35	65.49
Os05t0529400-01	Rice	cytosol	64.35	65.49
Os01t0731000-01	Rice	plasma membrane	64.35	65.49
CDY24099	Canola	cytosol	63.48	64.04
TraesCS5B01G184800.1	Wheat	cytosol	65.22	63.56
TraesCS5A01G186400.1	Wheat	cytosol	65.22	63.56
TraesCS5D01G191600.1	Wheat	cytosol	64.35	62.71
Zm00001d039399_P001	Maize	cytosol, nucleus, plastid	40.0	62.16
GSMUA_Achr2P15540_001	Banana	cytosol	60.87	61.4
HORVU5Hr1G041520.2	Barley	mitochondrion	63.48	59.84
Zm00001d005631_P001	Maize	mitochondrion, plasma membrane	62.61	59.02
TraesCS3B01G315300.2	Wheat	cytosol	66.09	58.91
EER98775	Sorghum	cytosol	61.74	58.2
TraesCS3A01G281600.1	Wheat	cytosol, endoplasmic reticulum, plastid	66.96	53.47
TraesCS3D01G281600.2	Wheat	cytosol, endoplasmic reticulum, plastid	66.09	52.78
TraesCS1B01G363900.2	Wheat	cytosol	65.22	51.37
CDY62073	Canola	cytosol, mitochondrion, nucleus	35.65	42.71
Zm00001d038753_P002	Maize	cytosol	54.78	42.0

Protein Annotations

EnsemblPlants:Solyc07g062290.2.1	EnsemblPlantsGene:Solyc07g062290.2	Gene3D:1.20.225.20	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0043130	InterPro:DC-UbP/UBTD2_N	InterPro:DC-UbP/UBTD2_N_sf	InterPro:IPR038169	PANTHER:PTHR13609	PANTHER:PTHR13609:SF13
PFAM:PF16455	UniParc:UPI000276B667	UniProt:K4CGR2	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7:-:65059249..65061478

Molecular Weight (calculated)

12970.6 Da

IEP (calculated)

9.145

GRAVY (calculated)

-0.575

Length

115 amino acids

Sequence
(BLAST)

001: MGACGSSHVK PNRIGKRIIR KPKPWKHPQP ITRSQLMQLR EEFWDTAPHY GGKKEIWDAL RGAAEADLEL AQAIVDSAGI IAQNTNMTIC YDESGTKYEL
101: PKYVLSEPTN MIRFG

Best Arabidopsis Sequence Match ( AT1G53400.1 )
(BLAST)

001: MGCAGSTQSQ ADGSVKKIRK PKPWKHTQPI TKAELMKLRE EFWDTAPHYG GRKEIWDALR AAAEADISLA QAIVDSAGVI VQNTDLTVCY DERGAKYELP
101: KYVLSEPTNL EEEN

Arabidopsis Description

F12M16.29 [Source:UniProtKB/TrEMBL;Acc:Q9MAG2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.