Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY60203 | Canola | cytosol | 95.61 | 95.61 |
Bra038123.1-P | Field mustard | cytosol | 93.86 | 93.86 |
Bra039670.1-P | Field mustard | cytosol | 89.47 | 89.47 |
CDY24097 | Canola | cytosol | 89.47 | 89.47 |
CDY24099 | Canola | cytosol | 86.84 | 86.84 |
KRH27369 | Soybean | cytosol | 83.33 | 83.33 |
VIT_19s0014g01000.t01 | Wine grape | cytosol | 78.95 | 78.95 |
HORVU3Hr1G069400.1 | Barley | cytosol | 74.56 | 75.22 |
Os09t0345000-02 | Rice | cytosol | 76.32 | 75.0 |
TraesCS5B01G184800.1 | Wheat | cytosol | 76.32 | 73.73 |
TraesCS5A01G186400.1 | Wheat | cytosol | 76.32 | 73.73 |
TraesCS1A01G349000.1 | Wheat | cytosol | 72.81 | 73.45 |
TraesCS1D01G352200.1 | Wheat | cytosol | 72.81 | 73.45 |
HORVU1Hr1G081490.1 | Barley | cytosol | 72.81 | 73.45 |
GSMUA_Achr7P24870_001 | Banana | cytosol | 67.54 | 73.33 |
PGSC0003DMT400018283 | Potato | cytosol | 73.68 | 73.04 |
TraesCS5D01G191600.1 | Wheat | cytosol | 75.44 | 72.88 |
Os05t0529400-01 | Rice | cytosol | 71.93 | 72.57 |
KXG22390 | Sorghum | cytosol | 70.18 | 70.8 |
EES03565 | Sorghum | cytosol | 70.18 | 70.8 |
Zm00001d043565_P001 | Maize | cytosol | 70.18 | 70.8 |
Solyc07g062290.2.1 | Tomato | cytosol | 71.05 | 70.43 |
GSMUA_Achr3P31840_001 | Banana | cytosol | 71.93 | 70.09 |
AT5G45740.1 | Thale cress | nucleus | 71.05 | 68.64 |
AT1G16960.1 | Thale cress | nucleus | 68.42 | 68.42 |
Os01t0731000-01 | Rice | plasma membrane | 67.54 | 68.14 |
HORVU5Hr1G041520.2 | Barley | mitochondrion | 71.05 | 66.39 |
TraesCS3B01G315300.2 | Wheat | cytosol | 73.68 | 65.12 |
GSMUA_Achr2P15540_001 | Banana | cytosol | 64.91 | 64.91 |
Zm00001d005631_P001 | Maize | mitochondrion, plasma membrane | 68.42 | 63.93 |
EER98775 | Sorghum | cytosol | 67.54 | 63.11 |
Zm00001d039399_P001 | Maize | cytosol, nucleus, plastid | 40.35 | 62.16 |
CDY62073 | Canola | cytosol, mitochondrion, nucleus | 50.88 | 60.42 |
TraesCS3D01G281600.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 75.44 | 59.72 |
TraesCS3A01G281600.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 74.56 | 59.03 |
TraesCS1B01G363900.2 | Wheat | cytosol | 72.81 | 56.85 |
Zm00001d038753_P002 | Maize | cytosol | 58.77 | 44.67 |
Protein Annotations
Gene3D:1.20.225.20 | MapMan:35.2 | EntrezGene:841776 | UniProt:A0A178W898 | ProteinID:AAF69541.1 | ProteinID:AEE32937.1 |
EMBL:AF370164 | ArrayExpress:AT1G53400 | EnsemblPlantsGene:AT1G53400 | RefSeq:AT1G53400 | TAIR:AT1G53400 | RefSeq:AT1G53400-TAIR-G |
EnsemblPlants:AT1G53400.1 | TAIR:AT1G53400.1 | EMBL:AY059126 | InterPro:DC-UbP/UBTD2_N | InterPro:DC-UbP/UBTD2_N_sf | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043130 | InterPro:IPR038169 | RefSeq:NP_564630.1 | ProteinID:OAP13302.1 |
PFAM:PF16455 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13609 |
PANTHER:PTHR13609:SF13 | UniProt:Q9MAG2 | UniParc:UPI00000A3993 | : | : | : |
Description
F12M16.29 [Source:UniProtKB/TrEMBL;Acc:Q9MAG2]
Coordinates
chr1:+:19924660..19926631
Molecular Weight (calculated)
12707.0 Da
IEP (calculated)
5.227
GRAVY (calculated)
-0.625
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAGSTQSQ ADGSVKKIRK PKPWKHTQPI TKAELMKLRE EFWDTAPHYG GRKEIWDALR AAAEADISLA QAIVDSAGVI VQNTDLTVCY DERGAKYELP
101: KYVLSEPTNL EEEN
101: KYVLSEPTNL EEEN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.