Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P28490_001 | Banana | nucleus | 23.23 | 36.51 |
| GSMUA_Achr7P01370_001 | Banana | cytosol | 23.23 | 36.51 |
| Solyc10g084350.1.1 | Tomato | nucleus | 50.51 | 24.27 |
| Bra034075.1-P | Field mustard | cytosol | 59.6 | 15.17 |
| Bra029780.1-P | Field mustard | cytosol | 59.6 | 14.53 |
| PGSC0003DMT400028707 | Potato | cytosol | 54.55 | 13.81 |
| Bra005749.1-P | Field mustard | cytosol | 56.57 | 13.79 |
| Bra009560.1-P | Field mustard | cytosol | 56.57 | 13.79 |
| Bra001302.1-P | Field mustard | cytosol | 56.57 | 13.79 |
| KRH32387 | Soybean | nucleus | 55.56 | 13.58 |
| PGSC0003DMT400071725 | Potato | cytosol | 54.55 | 13.3 |
| Solyc09g007250.2.1 | Tomato | nucleus | 54.55 | 13.3 |
| KRH19796 | Soybean | nucleus | 53.54 | 13.09 |
| PGSC0003DMT400045381 | Potato | cytosol | 53.54 | 13.02 |
| GSMUA_Achr4P21120_001 | Banana | cytosol | 50.51 | 12.32 |
| Solyc10g086010.1.1 | Tomato | extracellular | 53.54 | 12.18 |
| KRH67633 | Soybean | endoplasmic reticulum, mitochondrion | 48.48 | 12.09 |
| GSMUA_Achr5P03060_001 | Banana | cytosol | 49.49 | 12.07 |
| KRG95915 | Soybean | endoplasmic reticulum | 50.51 | 11.63 |
| Zm00001d013076_P001 | Maize | plasma membrane | 41.41 | 10.15 |
| Zm00001d018957_P001 | Maize | plasma membrane | 40.4 | 9.93 |
| TraesCS1A01G354400.1 | Wheat | cytosol, extracellular, golgi, unclear | 40.4 | 9.9 |
| TraesCS1B01G274700.2 | Wheat | cytosol, nucleus | 40.4 | 9.9 |
| TraesCS1D01G264200.1 | Wheat | cytosol | 40.4 | 9.9 |
| TraesCS5A01G439100.2 | Wheat | cytosol, unclear | 40.4 | 9.9 |
| TraesCS5B01G442100.1 | Wheat | cytosol, golgi, nucleus, unclear | 40.4 | 9.9 |
| KXG34535 | Sorghum | cytosol | 40.4 | 9.9 |
| Zm00001d007824_P001 | Maize | plasma membrane | 40.4 | 9.9 |
| HORVU5Hr1G105870.1 | Barley | cytosol, plasma membrane | 40.4 | 9.8 |
| TraesCS5D01G446300.2 | Wheat | cytosol | 39.39 | 9.65 |
| Zm00001d034440_P001 | Maize | mitochondrion, plasma membrane | 39.39 | 9.65 |
| Os03t0796501-00 | Rice | nucleus | 39.39 | 9.65 |
| EER90739 | Sorghum | cytosol, plastid | 39.39 | 9.65 |
| HORVU4Hr1G075710.1 | Barley | mitochondrion | 40.4 | 9.43 |
| Os07t0180900-01 | Rice | nucleus, plasma membrane | 38.38 | 9.38 |
| TraesCS2A01G253600.1 | Wheat | cytosol | 37.37 | 9.18 |
| GSMUA_Achr2P12650_001 | Banana | plastid | 27.27 | 6.73 |
| VIT_15s0045g00110.t01 | Wine grape | cytosol | 9.09 | 4.11 |
| VIT_00s0208g00020.t01 | Wine grape | cytosol | 15.15 | 3.87 |
| KRG96019 | Soybean | endoplasmic reticulum, extracellular | 1.01 | 1.11 |
| GSMUA_Achr4P28500_001 | Banana | cytosol | 1.01 | 0.89 |
Protein Annotations
Description
No Description!
Coordinates
chrA03:-:4502478..4502922
Molecular Weight (calculated)
11102.0 Da
IEP (calculated)
11.366
GRAVY (calculated)
-0.384
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MGISKKSSNV CTSLSSSRRE PPQIDLARAL SQVQSAVKPI KKDAQKNLLK NLNVMLKLKR MSLLAEAQRV KAKKEKLTKK RKTVTIILMC SIGSGRCWY
001: MAAAAARPLV TIQTLDGDMS TDQSSTVVLP DVMTAPVRPD IVNFVHAQIS NNSRQPYAVS KKAGHQTSAE SWGTGRAVSR IPRVPGGGTH RAGQAAFGNM
101: CRGGRMFAPT KIWRRWHRRV NVNMKRHAIV SAIAATAVPA LVMARGHKIE NVPEMPLVVS DSAEAVEKTS AAIKVLKQIG AYDDAEKAKN SIGIRPGKGK
201: MRNRRYISRK GPLVVYGTEG SKIVKAFRNL PGVELCHVER LNLLKLAPGG HLGRFVIWTK SAFEKLESIY GSFEKPSEKK KGYVLPRAKM VNADLARIIN
301: SDEIQSVVNP IKKDAKRAVL KKNPLKNLNV MLKLNPYAKT AKRMSLLAEA QRVKAKKEKL AKKRKTVTKE ALAIKAAGKS WYKTMISDSD YTEFDNFTKW
401: LGASQ
101: CRGGRMFAPT KIWRRWHRRV NVNMKRHAIV SAIAATAVPA LVMARGHKIE NVPEMPLVVS DSAEAVEKTS AAIKVLKQIG AYDDAEKAKN SIGIRPGKGK
201: MRNRRYISRK GPLVVYGTEG SKIVKAFRNL PGVELCHVER LNLLKLAPGG HLGRFVIWTK SAFEKLESIY GSFEKPSEKK KGYVLPRAKM VNADLARIIN
301: SDEIQSVVNP IKKDAKRAVL KKNPLKNLNV MLKLNPYAKT AKRMSLLAEA QRVKAKKEKL AKKRKTVTKE ALAIKAAGKS WYKTMISDSD YTEFDNFTKW
401: LGASQ
Arabidopsis Description
RPL4A60S ribosomal protein L4-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF40]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.