CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92462	Soybean	nucleus, plastid	97.21	96.88
KRH38736	Soybean	nucleus, plastid	91.99	90.72
KRH09238	Soybean	mitochondrion, nucleus, plastid	91.29	90.66
GSMUA_Achr6P12670_001	Banana	plasma membrane	81.18	83.51
GSMUA_Achr3P02780_001	Banana	plastid	83.62	82.76
GSMUA_Achr10P...	Banana	plastid	82.58	82.29
VIT_18s0089g01170.t01	Wine grape	cytosol, extracellular, plastid	89.55	63.93
KRH58809	Soybean	mitochondrion	52.26	47.32
KRH42317	Soybean	mitochondrion, nucleus, plastid	40.77	44.49
KRH08634	Soybean	endoplasmic reticulum	19.16	44.35
KRH08676	Soybean	nucleus, plastid	40.77	44.32
KRH08672	Soybean	mitochondrion, nucleus, plastid	40.77	44.32
KRH08669	Soybean	nucleus, plastid	40.42	43.94
KRH58441	Soybean	mitochondrion, plastid	40.07	43.73
KRH14122	Soybean	nucleus, plastid	39.02	42.26
KRH22164	Soybean	nucleus, plastid	39.02	41.95
KRH74003	Soybean	nucleus, plastid	38.33	41.51
KRH27171	Soybean	mitochondrion, nucleus, plastid	38.68	41.42
KRH70280	Soybean	plastid	34.15	39.36
KRH12566	Soybean	plastid	30.66	33.85
KRH08384	Soybean	nucleus, plastid	28.92	33.74
KRH17548	Soybean	cytosol, peroxisome, plastid	23.69	33.66
KRH70044	Soybean	mitochondrion, nucleus, plastid	28.57	33.33
KRH63318	Soybean	plastid	28.92	32.94
KRH54568	Soybean	nucleus, plastid	28.92	32.94
KRH37524	Soybean	plastid	29.62	32.69
KRH14048	Soybean	nucleus, plastid	31.36	32.61
KRH74072	Soybean	mitochondrion, nucleus, plastid	31.36	32.61
KRH06016	Soybean	plastid	37.63	32.53
KRH06319	Soybean	nucleus, plastid	29.97	31.85
KRH47742	Soybean	nucleus	29.27	29.79
KRH65776	Soybean	nucleus, plastid	29.62	29.31
KRH75874	Soybean	mitochondrion, nucleus, plastid	29.62	29.31
KRH58296	Soybean	plastid	24.04	28.4
KRG97750	Soybean	plastid	27.18	28.06
KRH31130	Soybean	nucleus, plastid	27.18	27.66
KRH42185	Soybean	mitochondrion, nucleus, plastid	24.74	27.52
KRH51989	Soybean	nucleus	27.18	27.37
KRH68993	Soybean	plastid	29.27	27.27
KRH43915	Soybean	mitochondrion, nucleus, plastid	24.39	26.82
KRH10515	Soybean	mitochondrion, nucleus, plastid	24.04	26.54
KRH61286	Soybean	mitochondrion	12.89	16.89

Protein Annotations

MapMan:1.1.1.1.3	Gene3D:1.10.3460.10	EntrezGene:100820327	EMBL:ACUP02006590	InterPro:Chloro_AB-bd_pln	InterPro:Chloroa_b-bind
InterPro:Chlorophyll_a/b-bd_dom_sf	EnsemblPlantsGene:GLYMA_10G177200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009416	GO:GO:0009507	GO:GO:0009522	GO:GO:0009523	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009628	GO:GO:0009765	GO:GO:0009768	GO:GO:0009941	GO:GO:0009987
GO:GO:0010287	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016168	GO:GO:0018298
GO:GO:0019538	GO:GO:0031409	UniProt:I1LC20	InterPro:IPR023329	EnsemblPlants:KRH34336	ProteinID:KRH34336
ProteinID:KRH34336.1	PFAM:PF00504	PANTHER:PTHR21649	PANTHER:PTHR21649:SF53	SUPFAM:SSF103511	UniParc:UPI0001BA87C6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:41057913..41060874

Molecular Weight (calculated)

30853.3 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.027

Length

287 amino acids

Sequence
(BLAST)

001: MASLAASTAA MSEILGNPVN LRCATRSAPS PTTPATFKTV ALFSKKKPAP PPKKKPAAVS PANEELAKWY GPDRRIFLPE GLLDRSEIPE YLTGEVPGDY
101: GYDPFGLSKK PEDFAKYQAF ELIHARWAML GAAGFIIPEA FNKYGANCGP EAVWFKTGAL LLDGGTLNYF GKPIPINLIL AVVAEIVLVG GAEYYRIING
201: LDLEDKLHPG GPFDPLGLAK DPDQAALLKV KEIKNGRLAM FAMLGFYFQA YVTGEGPVEN LAKHLSDPFG NNLLTVIAGS AERAPTL

Best Arabidopsis Sequence Match ( AT4G10340.1 )
(BLAST)

001: MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL

Arabidopsis Description

LHCB5Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UW55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.