Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065692 | Potato | cytoskeleton, cytosol, nucleus | 61.21 | 79.67 |
| Solyc05g018780.1.1 | Tomato | cytosol, mitochondrion, nucleus | 71.03 | 74.41 |
| Solyc05g025630.1.1 | Tomato | cytosol, mitochondrion, nucleus | 86.65 | 74.3 |
| Os12t0132400-01 | Rice | nucleus | 26.7 | 69.28 |
| Bra031087.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 42.57 | 62.36 |
| Solyc07g039200.2.1 | Tomato | nucleus | 71.03 | 61.04 |
| CDY35872 | Canola | cytosol, nucleus, plastid | 51.39 | 60.0 |
| VIT_11s0016g02270.t01 | Wine grape | nucleus | 71.54 | 59.92 |
| KRH58776 | Soybean | nucleus | 69.27 | 58.14 |
| GSMUA_Achr8P09420_001 | Banana | cytosol, nucleus, plastid | 66.5 | 56.41 |
| KRH42676 | Soybean | nucleus | 68.51 | 55.06 |
| AT2G19540.1 | Thale cress | cytosol, mitochondrion, nucleus | 63.98 | 54.16 |
| CDX82701 | Canola | nucleus | 52.9 | 54.12 |
| CDY21659 | Canola | nucleus | 63.73 | 53.49 |
| CDX81935 | Canola | nucleus | 63.98 | 53.47 |
| CDY48712 | Canola | plastid | 63.22 | 53.29 |
| CDY03357 | Canola | plastid | 63.22 | 53.07 |
| Bra040681.1-P | Field mustard | cytosol | 47.36 | 51.93 |
| OQU82815 | Sorghum | mitochondrion | 59.45 | 51.42 |
| TraesCS4A01G187400.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.96 | 51.04 |
| Os11t0134500-01 | Rice | nucleus | 59.7 | 50.97 |
| TraesCS4D01G126000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 61.71 | 50.83 |
| TraesCS4B01G131200.1 | Wheat | nucleus | 61.71 | 50.83 |
| EES15567 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 61.21 | 50.73 |
| HORVU4Hr1G026330.2 | Barley | cytosol, mitochondrion, nucleus, plastid | 61.21 | 50.41 |
| Zm00001d010850_P003 | Maize | plasma membrane | 60.71 | 50.1 |
| Zm00001d044641_P004 | Maize | cytosol, mitochondrion, nucleus, plastid | 60.2 | 50.0 |
| TraesCS5B01G137200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 60.2 | 49.48 |
| TraesCS5A01G139800.1 | Wheat | mitochondrion, plastid | 59.95 | 49.28 |
| Solyc07g039330.2.1 | Tomato | nucleus | 19.9 | 20.95 |
| Solyc01g111590.2.1 | Tomato | cytosol | 20.91 | 20.6 |
| Solyc01g104510.2.1 | Tomato | nucleus | 21.91 | 20.52 |
| Solyc03g121580.2.1 | Tomato | nucleus | 23.17 | 20.0 |
| Solyc03g062940.2.1 | Tomato | cytosol | 14.11 | 17.72 |
| Solyc05g014070.1.1 | Tomato | cytosol, mitochondrion, nucleus | 2.27 | 7.63 |
| Solyc07g039320.2.1 | Tomato | nucleus | 2.27 | 5.92 |
| Os12t0132300-02 | Rice | cytosol | 1.01 | 2.19 |
| Os11t0134400-00 | Rice | cytosol | 1.01 | 2.19 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | UniProt:K4BYC9 | PFAM:PF00400 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR22850 | PANTHER:PTHR22850:SF6 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:Solyc05g014090.1 | EnsemblPlants:Solyc05g014090.1.1 |
| UniParc:UPI00027662B2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr5:+:7760966..7763568
Molecular Weight (calculated)
44198.6 Da
IEP (calculated)
5.273
GRAVY (calculated)
-0.468
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MWRIKYSYKK SCLILHIGIK ADKRASNSIG IFKLSNISGK RRDLVPTKTG DDDNMDSESS DSDDDNNEEK EVEAVLQLRK VFHEGCVNRI RAMTQNPHIV
101: ASWSDTGHVQ VWDFSSHLNA LAEAESDRSQ GASAVSNHSP LFKFGGHKDE GYAIDWSPHV PGRLVSGDCK NSIHLWEPTS DTTWNVEDPF IGHSASVEDL
201: QWSPVDPCVF ASCSVDGSIK IWDTRKKRSP TATIKAYKTD VNVISWNRGA SCMLASGSDD GAFSIQDLRV VKCGLNEGGE SVVAYFEYHK HPITSIEWSP
301: HHEAASTIAV SSSDNQLTIW DLSLERDEEE EAEFKVKMKE QVNVPTDLPP QLLFVHQGQK DLKELHWHPQ IPGMVISTAA DGFNILMLSN IENVLPA
101: ASWSDTGHVQ VWDFSSHLNA LAEAESDRSQ GASAVSNHSP LFKFGGHKDE GYAIDWSPHV PGRLVSGDCK NSIHLWEPTS DTTWNVEDPF IGHSASVEDL
201: QWSPVDPCVF ASCSVDGSIK IWDTRKKRSP TATIKAYKTD VNVISWNRGA SCMLASGSDD GAFSIQDLRV VKCGLNEGGE SVVAYFEYHK HPITSIEWSP
301: HHEAASTIAV SSSDNQLTIW DLSLERDEEE EAEFKVKMKE QVNVPTDLPP QLLFVHQGQK DLKELHWHPQ IPGMVISTAA DGFNILMLSN IENVLPA
001: MGRNVKTKAK RKNKKKAEAS SSEIPSIPTR VWQPGVDTLE DGEELQCDPS AYNSLHGFHV GWPCLSFDIL GDKLGLNRTE FPHTLYMVAG TQAEKAAHNS
101: IGLFKITNVS GKRRDVVPKT FGNGEDEDED DEDDSDSDDD DGDEASKTPN IQVRRVAHHG CVNRIRAMPQ NSHICVSWAD SGHVQVWDMS SHLNALAESE
201: TEGKDGTSPV LNQAPLVNFS GHKDEGYAID WSPATAGRLL SGDCKSMIHL WEPASGSWAV DPIPFAGHTA SVEDLQWSPA EENVFASCSV DGSVAVWDIR
301: LGKSPALSFK AHNADVNVIS WNRLASCMLA SGSDDGTFSI RDLRLIKGGD AVVAHFEYHK HPITSIEWSA HEASTLAVTS GDNQLTIWDL SLEKDEEEEA
401: EFNAQTKELV NTPQDLPPQL LFVHQGQKDL KELHWHNQIP GMIISTAGDG FNILMPYNIQ NTLPSELPA
101: IGLFKITNVS GKRRDVVPKT FGNGEDEDED DEDDSDSDDD DGDEASKTPN IQVRRVAHHG CVNRIRAMPQ NSHICVSWAD SGHVQVWDMS SHLNALAESE
201: TEGKDGTSPV LNQAPLVNFS GHKDEGYAID WSPATAGRLL SGDCKSMIHL WEPASGSWAV DPIPFAGHTA SVEDLQWSPA EENVFASCSV DGSVAVWDIR
301: LGKSPALSFK AHNADVNVIS WNRLASCMLA SGSDDGTFSI RDLRLIKGGD AVVAHFEYHK HPITSIEWSA HEASTLAVTS GDNQLTIWDL SLEKDEEEEA
401: EFNAQTKELV NTPQDLPPQL LFVHQGQKDL KELHWHNQIP GMIISTAGDG FNILMPYNIQ NTLPSELPA
Arabidopsis Description
Putative WD-40 repeat protein [Source:UniProtKB/TrEMBL;Acc:Q9ZUN8]
SUBAcon: [mitochondrion,nucleus,cytosol]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.