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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G450400.1 Wheat nucleus 33.8 38.62
Zm00001d012095_P001 Maize cytosol, nucleus, plastid 11.11 31.37
Zm00001d012092_P001 Maize nucleus 18.75 28.42
KRH22734 Soybean nucleus 12.27 27.46
EES04076 Sorghum nucleus 17.36 27.08
Solyc09g009030.2.1 Tomato nucleus 15.05 24.16
PGSC0003DMT400006927 Potato nucleus 15.05 24.16
TraesCS1D01G454400.2 Wheat nucleus 17.36 24.12
AT2G27840.3 Thale cress cytosol 11.11 23.65
Zm00001d042433_P001 Maize nucleus 13.43 23.58
KRH30517 Soybean nucleus 15.51 23.18
KRH26575 Soybean nucleus 16.44 23.13
KRH67840 Soybean nucleus 15.28 22.92
VIT_08s0007g03940.t01 Wine grape nucleus 15.74 22.82
KRH25160 Soybean nucleus 15.51 22.41
PGSC0003DMT400005672 Potato nucleus 14.35 21.38
KRG96126 Soybean nucleus 14.35 21.16
Solyc11g066840.1.1 Tomato nucleus 15.51 21.14
PGSC0003DMT400021644 Potato nucleus 13.89 20.91
CDX77140 Canola nucleus 10.19 20.47
Bra034373.1-P Field mustard nucleus 9.95 20.0
Solyc10g085560.1.1 Tomato nucleus 14.12 19.87
VIT_06s0061g01240.t01 Wine grape nucleus 15.97 19.55
PGSC0003DMT400068253 Potato cytosol 15.97 19.38
CDY30525 Canola cytosol, nucleus, plastid 9.72 19.09
TraesCS3D01G410300.2 Wheat nucleus 14.35 17.03
HORVU3Hr1G092400.1 Barley nucleus 2.31 15.62
GSMUA_Achr8P01440_001 Banana extracellular 6.02 10.92
VIT_03s0132g00020.t01 Wine grape nucleus 1.85 6.84
VIT_06s0009g03080.t01 Wine grape nucleus 1.62 6.25
Protein Annotations
EnsemblPlants:TraesCS3D01G410400.1EnsemblPlantsGene:TraesCS3D01G410400PANTHER:PTHR31802PANTHER:PTHR31802:SF8SEG:segMapMan:12.3.2.2
Description
No Description!
Coordinates
chr3D:-:523708488..523711250
Molecular Weight (calculated)
46109.4 Da
IEP (calculated)
4.347
GRAVY (calculated)
-0.868
Length
432 amino acids
Sequence
(BLAST)
001: MKFWGVEVKP GQTVYCDPGE GRVVHLTQVA LGEAEKGSVG ILVSAKIGDQ KGAIGTLSAE NHPHIPCDLI FEKQFELSHS SKTASVFACG YKIFVPICES
101: DSSELDSSEF DSSESDSSES DSSEDEVETV NNQVTNRIVG NVVKPPTTKD DKKVTDKPDS GEDDSDFSSD SDDYADDGYS SLDTDSEEDG TGSEEMDTSS
201: KEEDKDSPKT EDGKKAVAET ALKTPASDDT SSKEGSGDEE NKNTPKPEDG KKTAAETALK TPASTASSGP CALQPEDGEK TVAAETDLKT PASDDTSNKE
301: DTNDQEDKST PKPEVGGKRA AETALETPAP DKKAKIETPS GQDAGAVVRT VFNQLNPHLL QMTRRLSMWQ LPIQQSRPTR RLQGTASKTS SPNMSAAPTP
401: ASRAAGHSAV FQRSNRMRRP STLELLLVTT CC
Best Arabidopsis Sequence Match ( AT3G44750.2 )
(BLAST)
001: MEFWGIEVKS GKPVTVTPEE GILIHVSQAS LGECKNKKGE FVPLHVKVGN QNLVLGTLST ENIPQLFCDL VFDKEFELSH TWGKGSVYFV GYKTPNIEPQ
101: GYSEEEEEEV PAGNAAKAVA KPKAKPAEVK PAVDDEEDES DSDGMDEDDS DGEDSEEEEP TPKKPASSKK RANETTPKAP VSAKKAKVAV TPQKTDEKKK
201: GGKAANQSPK SASQVSCGSC KKTFNSGNAL ESHNKAKHAA AK
Arabidopsis Description
HDT1Histone deacetylase HDT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FVE6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.