Factsheet for TraesCS7B01G232200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G328100.1	Wheat	mitochondrion	95.15	96.14
TraesCS7A01G350700.1	Wheat	mitochondrion	95.77	95.87
OQU76491	Sorghum	nucleus	55.83	82.47
Os06t0526600-01	Rice	mitochondrion	69.66	73.13
Zm00001d046097_P001	Maize	mitochondrion	67.91	70.3
GSMUA_Achr10P...	Banana	mitochondrion	50.36	64.47
AT5G08620.1	Thale cress	nucleus	35.6	61.28
TraesCS3B01G252700.2	Wheat	nucleus	30.03	61.01
Bra028652.1-P	Field mustard	nucleus	34.06	61.0
Bra009356.1-P	Field mustard	cytosol	35.29	60.96
CDY40740	Canola	cytosol	33.95	60.81
TraesCS3B01G252600.1	Wheat	plastid	35.91	59.49
KRH47920	Soybean	nucleus	42.62	58.75
AT5G63630.2	Thale cress	mitochondrion, plastid	42.93	58.1
CDY44780	Canola	mitochondrion	34.37	57.61
CDX84428	Canola	mitochondrion	41.9	57.43
CDY41525	Canola	mitochondrion	42.11	57.38
VIT_15s0046g01010.t01	Wine grape	plastid	44.58	56.18
Bra038650.1-P	Field mustard	mitochondrion	42.0	54.78
KRH06491	Soybean	nucleus	44.69	53.72
Bra009355.1-P	Field mustard	mitochondrion, plastid	40.97	52.1
AT5G08610.1	Thale cress	mitochondrion, plastid	43.96	50.12
Solyc01g095740.2.1	Tomato	nucleus	44.79	49.89
PGSC0003DMT400000611	Potato	mitochondrion	43.96	48.91
TraesCS6B01G455000.1	Wheat	cytosol	31.58	36.3
TraesCS6B01G342900.1	Wheat	nucleus	16.51	29.3
CDY21554	Canola	mitochondrion	40.56	28.92
CDX69935	Canola	mitochondrion	40.25	28.28
TraesCS5B01G120400.1	Wheat	nucleus	16.2	27.07
TraesCS2B01G179900.1	Wheat	cytosol	13.11	24.85
TraesCS6B01G142500.1	Wheat	mitochondrion, nucleus	12.18	24.58
TraesCS2B01G150800.1	Wheat	mitochondrion	12.28	23.06
TraesCS3B01G116900.1	Wheat	plastid	15.27	23.02
TraesCS1B01G037600.1	Wheat	nucleus	14.34	22.56
TraesCS7B01G213800.1	Wheat	nucleus	7.02	22.01
TraesCS5B01G378100.1	Wheat	nucleus	15.69	19.51
TraesCS2B01G247500.1	Wheat	nucleus	14.76	18.74
TraesCS2B01G384300.1	Wheat	nucleus	15.89	18.44
TraesCS4B01G341100.1	Wheat	plastid	12.9	14.64

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR014014	InterPro:P-loop_NTPase	PFAM:PF00270	PFAM:PF00271	ScanProsite:PS00039	PFscan:PS51192
PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF528	InterPro:RNA-helicase_DEAD-box_CS	InterPro:RNA_helicase_DEAD_Q_motif
SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS7B01G232200	EnsemblPlants:TraesCS7B01G232200.1	TIGR:cd00079
TIGR:cd00268	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:435122845..435130010

Molecular Weight (calculated)

104602.0 Da

IEP (calculated)

9.370

GRAVY (calculated)

-0.702

Length

969 amino acids

Sequence
(BLAST)

001: MRGRHHLLGF LRRAAAGSFS AARRADSLSH LHPFPPGNGA AVPISTRFLS SRPSGAARSL IEDEADLSDW VSDIKADSFN LGLSSGDERE ASSRKPAASR
101: GGRRGRDSGG PPTRSRFDGG DFGGERRGGD FGGDRRGGRF GGDSRGGWFG GDSHGGRFGG DRRGGRFGGD SRGGRSGGDR PGSERRGRVV SSDFSDDGES
201: GFGSARGRRG RGRMSSGFAQ RGGRGGDFGD EAGFRSSRGQ RGRGGRALGL SHREGRYSDL DDEASGFGSP RGRRGRGGRT TGLSGRGLRG SDLDDDEDDS
301: GEEVGFGSPR GRRGRGGRAS GLSRRGGRGS DLDDDEDDSG EEVGFGSPRG IRGRGGRMSS LSRRGGTESD LDDDEDDDDD DDAIEFGASG GRHNRGGIAE
401: KMGNLGSRRG GKVRDVDFGN RRSKGRKMSD FGSSEDDSES GEVDEDDGSS GFEDGLSGDD SVQEDLVNNA AKKSVSSESV EQESVLGTRD NGGADSYLSQ
501: RRFDECSLSP ATLKGVKAAG YERMTAVQEA TLPIILKGKD VLAKARTGTG KTVAFLLPAI EVVSKLPPHD HDKKRPPISV IVVCPTRELA DQAAAEANKL
601: LKFHPSIGVQ LVIGGTRMAL EQKRMHTNPC QILVATPGRL KDHMENTPGF ATRLMGVKFL ILDEADRLLD MGFRTDIERI VAALPKQRQT LLFSATVPDE
701: VRQVCHVAMK RDLEFVNTVL EGSEETHSQV KQMHLVAPLD KQFSILYGLL ADHISENVDY KVIVFCTTAK VTSLVAELLS ELKLNVREIH SRKPQSYRTR
801: ISKEFKESKG LILVSSDVSA RGVDYPNVTL VLQLGVPSDR EQYIHRLGRT GRKGNEGSGV LLLAPWEEYF LRSIKDLPIT EATLPLIDLD TKRKVEKALA
901: HVEVKDKESA YQAWLGYYNS NKQIGRDKYQ LVSLANEFSR SLGLNNPPAL TKLILKKMGL SNIPGLRSK

Best Arabidopsis Sequence Match ( AT5G63630.2 )
(BLAST)

001: MPLNFPLRIR FFAHSLSGTH LSYNTSSSVP LLFRIFSSGL NHFEFGSRIN FSTRPNRDQP EFERRIRDGG EIRASKSLIE DEEELSNWVS GFRTGSSRGI
101: LKSDDEDEED RSRGRNQEKR GIRNQVDSFR NKRYGGDRER GFNSRIQGKS SEASFRGRKE TSFSRDREDE KGLRKREDLR LEDESSDEDV KSLVMGDIGD
201: LLSEDDEEED QDYDFLKKKA VSAFGFDKEN VIEADKTRNA NDSYLTKTRF DHYPLSPLSL KAIKDAGYET MTVVQEATLP IILKGKDVLA KAKTGTGKTV
301: AFLLPSIEVV VKSPPTSPDN KRPPILALVI CPTRELANQA ATEANTLLKY HPSIGVQVVI GGTRLGLEQK RMQTNPCQIL VATPGRLKDH IENTPGFATR
401: LKGVKVLVLD EADHLLDMGF RKDIERIISA VPKERQTFLF SATVPEEVRQ ICLVALRRDH EFVNCVHEGT IETHQQVRQM HMIASLDRHF SLLYTLLREH
501: IMGNVDYKVI VFCTTAMVTK LVADLLGELN LNVREIHSRK PQSYRTRVSN EFRKSKGLIL VTSDVSARGV DYPDVTLVLQ VGLPKDREQY IHRLGRTGRK
601: GKEGEGILLL APWEEYFLSS LKDLPITKSP LPSIDPETVK KVQKALCHVE MRNKEAAYQA WLGYYNSQKM IGRDKDRLVE LANEFSRSMG LDNPPAIPKL
701: ILGKMGLKNV PGLRAK

Arabidopsis Description

RH31DEAD-box ATP-dependent RNA helicase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.