Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69935 | Canola | mitochondrion | 97.2 | 95.79 |
| Bra009355.1-P | Field mustard | mitochondrion, plastid | 53.2 | 94.88 |
| CDX69933 | Canola | cytosol | 9.05 | 90.44 |
| CDY40740 | Canola | cytosol | 31.05 | 78.0 |
| CDY44780 | Canola | mitochondrion | 32.08 | 75.43 |
| AT5G08610.1 | Thale cress | mitochondrion, plastid | 47.17 | 75.41 |
| CDY41525 | Canola | mitochondrion | 36.2 | 69.2 |
| CDX84428 | Canola | mitochondrion | 35.98 | 69.17 |
| Os01t0618500-01 | Rice | nucleus | 25.39 | 64.37 |
| HORVU3Hr1G054730.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 24.94 | 63.01 |
| EES03287 | Sorghum | cytosol | 25.68 | 62.21 |
| TraesCS3A01G222500.1 | Wheat | nucleus, plastid | 24.5 | 61.9 |
| TraesCS3B01G252700.2 | Wheat | nucleus | 21.71 | 61.84 |
| TraesCS3D01G230300.1 | Wheat | nucleus | 24.36 | 61.52 |
| Zm00001d044208_P001 | Maize | plastid | 26.49 | 61.43 |
| EES01082 | Sorghum | mitochondrion, plastid | 26.42 | 61.05 |
| Os01t0618400-01 | Rice | nucleus, plasma membrane | 26.49 | 60.61 |
| Zm00001d044203_P001 | Maize | plasma membrane | 24.94 | 60.54 |
| VIT_15s0046g01010.t01 | Wine grape | plastid | 34.14 | 60.34 |
| KRH47920 | Soybean | nucleus | 30.91 | 59.74 |
| TraesCS3D01G230400.2 | Wheat | mitochondrion | 25.68 | 59.35 |
| TraesCS3A01G222700.1 | Wheat | mitochondrion | 25.61 | 59.18 |
| TraesCS3B01G252600.1 | Wheat | plastid | 25.39 | 58.97 |
| OQU76491 | Sorghum | nucleus | 26.71 | 55.34 |
| GSMUA_Achr10P... | Banana | mitochondrion | 29.73 | 53.37 |
| KRH06491 | Soybean | nucleus | 31.49 | 53.1 |
| GSMUA_Achr8P04210_001 | Banana | cytosol | 28.62 | 52.57 |
| Solyc01g095740.2.1 | Tomato | nucleus | 33.11 | 51.72 |
| PGSC0003DMT400000611 | Potato | mitochondrion | 32.08 | 50.06 |
| Zm00001d046097_P001 | Maize | mitochondrion | 29.29 | 42.52 |
| Os06t0526600-01 | Rice | mitochondrion | 28.4 | 41.82 |
| TraesCS7D01G328100.1 | Wheat | mitochondrion | 28.99 | 41.08 |
| TraesCS7A01G350700.1 | Wheat | mitochondrion | 28.99 | 40.7 |
| TraesCS7B01G232200.1 | Wheat | mitochondrion | 28.92 | 40.56 |
| CDY45370 | Canola | mitochondrion | 22.15 | 38.49 |
| CDY49890 | Canola | mitochondrion | 22.0 | 38.33 |
| CDY47007 | Canola | cytosol | 9.05 | 27.39 |
| CDY42845 | Canola | cytosol | 9.05 | 27.39 |
| CDX82336 | Canola | nucleus | 11.41 | 27.05 |
| CDX99342 | Canola | nucleus | 11.18 | 26.76 |
| CDY18530 | Canola | nucleus | 11.18 | 26.76 |
| CDX92251 | Canola | nucleus | 11.18 | 26.71 |
| CDX75974 | Canola | nucleus | 11.33 | 26.46 |
| CDX95512 | Canola | nucleus | 10.96 | 26.14 |
| CDY36514 | Canola | nucleus | 11.18 | 26.07 |
| CDY08740 | Canola | nucleus | 11.18 | 25.59 |
| CDX81759 | Canola | cytosol | 9.12 | 25.41 |
| CDX96202 | Canola | cytosol | 5.15 | 25.18 |
| CDY52844 | Canola | cytosol | 8.98 | 25.05 |
| CDY14112 | Canola | cytosol | 10.67 | 24.41 |
| CDY04952 | Canola | nucleus | 10.67 | 24.41 |
| CDX70149 | Canola | nucleus | 10.6 | 24.08 |
| CDX79974 | Canola | nucleus | 10.45 | 20.64 |
| CDY23886 | Canola | plasma membrane | 10.23 | 19.83 |
| CDY17287 | Canola | nucleus | 9.49 | 19.72 |
| CDY40519 | Canola | nucleus | 10.89 | 19.53 |
| CDY50846 | Canola | nucleus | 11.26 | 18.24 |
| CDY53643 | Canola | nucleus | 11.26 | 18.13 |
| CDY52719 | Canola | nucleus, plastid | 10.67 | 17.49 |
| CDY34979 | Canola | nucleus, plastid | 10.6 | 17.31 |
| CDX79187 | Canola | cytosol | 9.49 | 15.21 |
| CDX68066 | Canola | cytosol | 9.49 | 15.14 |
| CDY32273 | Canola | nucleus | 10.15 | 15.12 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078G822 | UniProt:A0A078G822 | EnsemblPlants:CDY21554 | ProteinID:CDY21554 |
| ProteinID:CDY21554.1 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00016007001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:IPR014014 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFscan:PS51192 | PFscan:PS51194 |
| PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF528 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF52540 | UniParc:UPI0004EDB8AB | SEG:seg | : | : | : |
Description
BnaC09g47380DBnaC09g47380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G822]
Coordinates
chrLK032122:+:213735..220597
Molecular Weight (calculated)
150870.0 Da
IEP (calculated)
10.084
GRAVY (calculated)
-0.400
Length
1359 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLKFPLGVR FITHSLPCTH LASSMNSAAL IYSFRAVPVI SKALPSRLTC LGLCSRVSFS TRPEFGRRGE IRASKSLIED EAELSDWVSD LRTSSVRGKF
0101: TSDEDEAVQE RVRRNVERDD GRGPRKGREG QADRFGGSRK VDRFGGSNRS RTGGEPVRNN RFGDREGARN GRIQGRSGES SFRGRNERNV DSGFRRERGM
0201: ETNKGLGKQT RGLRQEEEDS SDEVVLGGID DLLSEVSSED DSEDDEAFVG KVVKGVEADM PRTDTAKTSD SYLSKTRFDQ FPLSPLSLRA IKDAGFETMT
0301: VVQEATLPII LKGKDVLAKA KTGTGKTVAF LLPSIEAVIK SPPASRDSRQ SPIVVLVVCP TRELASQAAA EANTLLKYHP SIGVQVVIGG TKLPTEQRRM
0401: QANPCQILVA TPGRLKDHIE NTSGFATRLN GVKVLVLDEA DHLLDMGFRR DIERIIAAVP KQRQTFLFSA TVPEEVRQIC HIALKRDHEF INCVQEGSGE
0501: THQKVKQMYM IASLDRHFSL LYVLLKEHMA DNPDYKVIIF CTTAMVTRLV ADLLGQLSLN VREIHSRKPQ GYRTKVSDEF RKSKSIILVT SDVSARGVDY
0601: PDVSLVVQMG LPSDREQYIH RLGRTGRKGK EGEGVLMLAP WEEYFLSSVK DLPINKSPLP PIDPEAVKKV QRGLNQVEMK NKEAAYQAWL GYYKSQKMIA
0701: RDTTRLVELA NEFSRSMGLD MPPAIPKNVL GKMGLKNVPG LRTKLCQCNL FSFLQTLDKS LLDSSLVPNK PKEKLDYPSR PVKVSGAHHS LPPPPLVSMT
0801: SDGPKSGKKR REIRAKLAKE LASGEDESGN KRTPKRGRED KSADVDEPLI KKAASTVSVE AADNKPKTSD SYLSKTRFDQ FPLSPLSLKG IQDAGFKTMT
0901: VVQEATLPII LKGKDVLAKA KTGTGKTVAF LLPSIEAVIK SPPVSRDNRH PPIIVLVVCP TRELACQAAA EANILLKYHS SIGVEVVIGG TKLPAEQRRM
1001: QKHPCQILVA TPGRLIDHID NTSGFATRLK GVKVLVLDEA DHLLDMGFRR DIERIIAAVP KQRQTFLFSA TVPEEVRQIC HIALKQDHEF VNCVQEGSGE
1101: THQKVSQMYM IATLDRHFSL IYALLKKHIA DNVGYKVIIF CTTAMVTRLV ADLLGQLSLN VREIHSRKPQ SYRTRVSDEF RKSKSIILVT SDVSARGVDY
1201: PDVSLVVQMG LPSDREQYIH RLGRTGRKGK EGEGVLLLAP WEEYFLSSVK DLPIAKAPLP PIDHEAVKKV QKALSQVEMT HKEAAYQAWL GYYKSQKKIA
1301: RDTTRLVELA NEFSRSMGLD TPPAIPINVI GKMGLKNVPG LRVAPGFDKR KGKKNYRSR
0101: TSDEDEAVQE RVRRNVERDD GRGPRKGREG QADRFGGSRK VDRFGGSNRS RTGGEPVRNN RFGDREGARN GRIQGRSGES SFRGRNERNV DSGFRRERGM
0201: ETNKGLGKQT RGLRQEEEDS SDEVVLGGID DLLSEVSSED DSEDDEAFVG KVVKGVEADM PRTDTAKTSD SYLSKTRFDQ FPLSPLSLRA IKDAGFETMT
0301: VVQEATLPII LKGKDVLAKA KTGTGKTVAF LLPSIEAVIK SPPASRDSRQ SPIVVLVVCP TRELASQAAA EANTLLKYHP SIGVQVVIGG TKLPTEQRRM
0401: QANPCQILVA TPGRLKDHIE NTSGFATRLN GVKVLVLDEA DHLLDMGFRR DIERIIAAVP KQRQTFLFSA TVPEEVRQIC HIALKRDHEF INCVQEGSGE
0501: THQKVKQMYM IASLDRHFSL LYVLLKEHMA DNPDYKVIIF CTTAMVTRLV ADLLGQLSLN VREIHSRKPQ GYRTKVSDEF RKSKSIILVT SDVSARGVDY
0601: PDVSLVVQMG LPSDREQYIH RLGRTGRKGK EGEGVLMLAP WEEYFLSSVK DLPINKSPLP PIDPEAVKKV QRGLNQVEMK NKEAAYQAWL GYYKSQKMIA
0701: RDTTRLVELA NEFSRSMGLD MPPAIPKNVL GKMGLKNVPG LRTKLCQCNL FSFLQTLDKS LLDSSLVPNK PKEKLDYPSR PVKVSGAHHS LPPPPLVSMT
0801: SDGPKSGKKR REIRAKLAKE LASGEDESGN KRTPKRGRED KSADVDEPLI KKAASTVSVE AADNKPKTSD SYLSKTRFDQ FPLSPLSLKG IQDAGFKTMT
0901: VVQEATLPII LKGKDVLAKA KTGTGKTVAF LLPSIEAVIK SPPVSRDNRH PPIIVLVVCP TRELACQAAA EANILLKYHS SIGVEVVIGG TKLPAEQRRM
1001: QKHPCQILVA TPGRLIDHID NTSGFATRLK GVKVLVLDEA DHLLDMGFRR DIERIIAAVP KQRQTFLFSA TVPEEVRQIC HIALKQDHEF VNCVQEGSGE
1101: THQKVSQMYM IATLDRHFSL IYALLKKHIA DNVGYKVIIF CTTAMVTRLV ADLLGQLSLN VREIHSRKPQ SYRTRVSDEF RKSKSIILVT SDVSARGVDY
1201: PDVSLVVQMG LPSDREQYIH RLGRTGRKGK EGEGVLLLAP WEEYFLSSVK DLPIAKAPLP PIDHEAVKKV QKALSQVEMT HKEAAYQAWL GYYKSQKKIA
1301: RDTTRLVELA NEFSRSMGLD TPPAIPINVI GKMGLKNVPG LRVAPGFDKR KGKKNYRSR
001: MSSKFPLGVR FITHSLPCTR LASMNSGALI YSFRSVPVLS KAFPFRLKYI GLGSRVNFST RPERSQPEFA RRSGAGGEIR ASKSLIEDEA ELSDWVSDLR
101: TSSLRGKFTS DEDNADPEVV RRNVDRDTSR GPRRGREGQS DRFGGAKRGK EGEMDRFGSP NRRRTSGEPA DSFGNKRLGD REGSRNGRVQ GKSSESSFRG
201: RSDRNVDSGS SFRGRSDKNV DSGSSFRGRN DRNVDSGSSF RGRSDRNVDS GSSFRGRSDR NVDSGSSFRG RNDRNVDSGS SFRGRNDRNV ESGFRREPGS
301: ENNRGLGKQT RGLSLEEEDS SDDDENRVGL GNIDDLPSED SSDEDDENDE PLIKKAASAK AVQTDKPTGE HVKTSDSYLS KTRFDQFPLS PLSLKAIKDA
401: GFETMTVVQE ATLPIILQGK DVLAKAKTGT GKTVAFLLPA IEAVIKSPPA SRDSRQPPII VLVVCPTREL ASQAAAEANT LLKYHPSIGV QVVIGGTKLP
501: TEQRRMQTNP CQILVATPGR LKDHIENTSG FATRLMGVKV LVLDEADHLL DMGFRRDIER IIAAVPKQRQ TFLFSATVPE EVRQICHVAL KRDHEFINCV
601: QEGSGETHQK VTQMYMIASL DRHFSLLHVL LKEHIADNVD YKVIIFCTTA MVTRLVADLL SQLSLNVREI HSRKPQSYRT RVSDEFRKSK AIILVTSDVS
701: ARGVDYPDVS LVVQMGLPSD REQYIHRLGR TGRKGKEGEG VLLLAPWEEY FMSSVKDLPI TKSPLPPIDP EAVKRVQKGL SQVEMKNKEA AYQAWLGYYK
801: SQKMIARDTT RLVELANEFS RSMGLDSPPA IPKNVLGKMG LKNVPGLRTK
101: TSSLRGKFTS DEDNADPEVV RRNVDRDTSR GPRRGREGQS DRFGGAKRGK EGEMDRFGSP NRRRTSGEPA DSFGNKRLGD REGSRNGRVQ GKSSESSFRG
201: RSDRNVDSGS SFRGRSDKNV DSGSSFRGRN DRNVDSGSSF RGRSDRNVDS GSSFRGRSDR NVDSGSSFRG RNDRNVDSGS SFRGRNDRNV ESGFRREPGS
301: ENNRGLGKQT RGLSLEEEDS SDDDENRVGL GNIDDLPSED SSDEDDENDE PLIKKAASAK AVQTDKPTGE HVKTSDSYLS KTRFDQFPLS PLSLKAIKDA
401: GFETMTVVQE ATLPIILQGK DVLAKAKTGT GKTVAFLLPA IEAVIKSPPA SRDSRQPPII VLVVCPTREL ASQAAAEANT LLKYHPSIGV QVVIGGTKLP
501: TEQRRMQTNP CQILVATPGR LKDHIENTSG FATRLMGVKV LVLDEADHLL DMGFRRDIER IIAAVPKQRQ TFLFSATVPE EVRQICHVAL KRDHEFINCV
601: QEGSGETHQK VTQMYMIASL DRHFSLLHVL LKEHIADNVD YKVIIFCTTA MVTRLVADLL SQLSLNVREI HSRKPQSYRT RVSDEFRKSK AIILVTSDVS
701: ARGVDYPDVS LVVQMGLPSD REQYIHRLGR TGRKGKEGEG VLLLAPWEEY FMSSVKDLPI TKSPLPPIDP EAVKRVQKGL SQVEMKNKEA AYQAWLGYYK
801: SQKMIARDTT RLVELANEFS RSMGLDSPPA IPKNVLGKMG LKNVPGLRTK
Arabidopsis Description
RH26PDE340 [Source:UniProtKB/TrEMBL;Acc:A0A178UFQ6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.