Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40740 | Canola | cytosol | 76.47 | 19.22 |
| CDY44780 | Canola | mitochondrion | 75.74 | 17.82 |
| CDX84428 | Canola | mitochondrion | 69.85 | 13.44 |
| CDY41525 | Canola | mitochondrion | 69.12 | 13.22 |
| CDY21554 | Canola | mitochondrion | 90.44 | 9.05 |
| CDX69935 | Canola | mitochondrion | 91.18 | 8.99 |
| CDY45370 | Canola | mitochondrion | 41.91 | 7.29 |
| CDY49890 | Canola | mitochondrion | 41.18 | 7.18 |
| TraesCS3B01G116900.1 | Wheat | plastid | 22.06 | 4.67 |
| TraesCS3A01G100100.1 | Wheat | plastid | 22.06 | 4.66 |
| TraesCS3D01G100800.1 | Wheat | plastid | 21.32 | 4.51 |
| HORVU3Hr1G018130.7 | Barley | plastid | 22.06 | 4.43 |
| CDX79974 | Canola | nucleus | 22.06 | 4.36 |
| CDY23886 | Canola | plasma membrane | 22.06 | 4.28 |
| CDX99342 | Canola | nucleus | 17.65 | 4.23 |
| CDY18530 | Canola | nucleus | 17.65 | 4.23 |
| CDX92251 | Canola | nucleus | 17.65 | 4.22 |
| CDX95512 | Canola | nucleus | 17.65 | 4.21 |
| CDX82336 | Canola | nucleus | 17.65 | 4.19 |
| CDX75974 | Canola | nucleus | 17.65 | 4.12 |
| CDY36514 | Canola | nucleus | 17.65 | 4.12 |
| CDY14112 | Canola | cytosol | 17.65 | 4.04 |
| CDY08740 | Canola | nucleus | 17.65 | 4.04 |
| CDY04952 | Canola | nucleus | 17.65 | 4.04 |
| CDX70149 | Canola | nucleus | 17.65 | 4.01 |
| Os01t0164500-01 | Rice | plastid | 18.38 | 3.86 |
| CDY42845 | Canola | cytosol | 12.5 | 3.79 |
| CDY47007 | Canola | cytosol | 12.5 | 3.79 |
| CDY17287 | Canola | nucleus | 17.65 | 3.67 |
| CDY40519 | Canola | nucleus | 16.18 | 2.9 |
| CDY52844 | Canola | cytosol | 10.29 | 2.87 |
| CDX81759 | Canola | cytosol | 10.29 | 2.87 |
| CDY52719 | Canola | nucleus, plastid | 16.91 | 2.77 |
| CDY34979 | Canola | nucleus, plastid | 16.91 | 2.76 |
| CDY50846 | Canola | nucleus | 16.91 | 2.74 |
| CDY53643 | Canola | nucleus | 16.91 | 2.73 |
| CDY32273 | Canola | nucleus | 17.65 | 2.63 |
| CDX79187 | Canola | cytosol | 16.18 | 2.59 |
| CDX68066 | Canola | cytosol | 16.18 | 2.58 |
| CDX96202 | Canola | cytosol | 0.0 | 0.0 |
| Zm00001d002007_P002 | Maize | cytosol, mitochondrion, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX69933 | EnsemblPlantsGene:GSBRNA2T00136010001 | Gene3D:3.40.50.300 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF528 | ProteinID:CDX69933 |
| ProteinID:CDX69933.1 | UniParc:UPI0004EEC0CD | MapMan:35.1 | : | : | : |
Description
BnaA10g22820D
Coordinates
chrLK031790:-:2397496..2398219
Molecular Weight (calculated)
15157.6 Da
IEP (calculated)
10.501
GRAVY (calculated)
-0.512
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGRKGKEGE GVLLLAPWEE YFLSSVKDLP IAKAPLPPID HEAVKKVQKA LSQVEMTHKE AAYQAWLGYY KSQKKIARDT TRLVELANEF SRSMGLDTPP
101: AIPINVIGKM GLKNVPGLRV APGIDKRQGK KNYRSR
101: AIPINVIGKM GLKNVPGLRV APGIDKRQGK KNYRSR
001: MSSKFPLGVR FITHSLPCTR LASMNSGALI YSFRSVPVLS KAFPFRLKYI GLGSRVNFST RPERSQPEFA RRSGAGGEIR ASKSLIEDEA ELSDWVSDLR
101: TSSLRGKFTS DEDNADPEVV RRNVDRDTSR GPRRGREGQS DRFGGAKRGK EGEMDRFGSP NRRRTSGEPA DSFGNKRLGD REGSRNGRVQ GKSSESSFRG
201: RSDRNVDSGS SFRGRSDKNV DSGSSFRGRN DRNVDSGSSF RGRSDRNVDS GSSFRGRSDR NVDSGSSFRG RNDRNVDSGS SFRGRNDRNV ESGFRREPGS
301: ENNRGLGKQT RGLSLEEEDS SDDDENRVGL GNIDDLPSED SSDEDDENDE PLIKKAASAK AVQTDKPTGE HVKTSDSYLS KTRFDQFPLS PLSLKAIKDA
401: GFETMTVVQE ATLPIILQGK DVLAKAKTGT GKTVAFLLPA IEAVIKSPPA SRDSRQPPII VLVVCPTREL ASQAAAEANT LLKYHPSIGV QVVIGGTKLP
501: TEQRRMQTNP CQILVATPGR LKDHIENTSG FATRLMGVKV LVLDEADHLL DMGFRRDIER IIAAVPKQRQ TFLFSATVPE EVRQICHVAL KRDHEFINCV
601: QEGSGETHQK VTQMYMIASL DRHFSLLHVL LKEHIADNVD YKVIIFCTTA MVTRLVADLL SQLSLNVREI HSRKPQSYRT RVSDEFRKSK AIILVTSDVS
701: ARGVDYPDVS LVVQMGLPSD REQYIHRLGR TGRKGKEGEG VLLLAPWEEY FMSSVKDLPI TKSPLPPIDP EAVKRVQKGL SQVEMKNKEA AYQAWLGYYK
801: SQKMIARDTT RLVELANEFS RSMGLDSPPA IPKNVLGKMG LKNVPGLRTK
101: TSSLRGKFTS DEDNADPEVV RRNVDRDTSR GPRRGREGQS DRFGGAKRGK EGEMDRFGSP NRRRTSGEPA DSFGNKRLGD REGSRNGRVQ GKSSESSFRG
201: RSDRNVDSGS SFRGRSDKNV DSGSSFRGRN DRNVDSGSSF RGRSDRNVDS GSSFRGRSDR NVDSGSSFRG RNDRNVDSGS SFRGRNDRNV ESGFRREPGS
301: ENNRGLGKQT RGLSLEEEDS SDDDENRVGL GNIDDLPSED SSDEDDENDE PLIKKAASAK AVQTDKPTGE HVKTSDSYLS KTRFDQFPLS PLSLKAIKDA
401: GFETMTVVQE ATLPIILQGK DVLAKAKTGT GKTVAFLLPA IEAVIKSPPA SRDSRQPPII VLVVCPTREL ASQAAAEANT LLKYHPSIGV QVVIGGTKLP
501: TEQRRMQTNP CQILVATPGR LKDHIENTSG FATRLMGVKV LVLDEADHLL DMGFRRDIER IIAAVPKQRQ TFLFSATVPE EVRQICHVAL KRDHEFINCV
601: QEGSGETHQK VTQMYMIASL DRHFSLLHVL LKEHIADNVD YKVIIFCTTA MVTRLVADLL SQLSLNVREI HSRKPQSYRT RVSDEFRKSK AIILVTSDVS
701: ARGVDYPDVS LVVQMGLPSD REQYIHRLGR TGRKGKEGEG VLLLAPWEEY FMSSVKDLPI TKSPLPPIDP EAVKRVQKGL SQVEMKNKEA AYQAWLGYYK
801: SQKMIARDTT RLVELANEFS RSMGLDSPPA IPKNVLGKMG LKNVPGLRTK
Arabidopsis Description
RH26PDE340 [Source:UniProtKB/TrEMBL;Acc:A0A178UFQ6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.