Factsheet for GSMUA_Achr10P26490_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76491	Sorghum	nucleus	59.05	68.14
Bra009356.1-P	Field mustard	cytosol	46.5	62.75
AT5G08620.1	Thale cress	nucleus	46.5	62.52
Bra028652.1-P	Field mustard	nucleus	43.99	61.55
CDY40740	Canola	cytosol	43.99	61.55
GSMUA_Achr3P14380_001	Banana	cytosol	36.2	61.3
KRH47920	Soybean	nucleus	56.67	61.02
CDY44780	Canola	mitochondrion	45.05	59.0
AT5G63630.2	Thale cress	mitochondrion, plastid	55.48	58.66
VIT_15s0046g01010.t01	Wine grape	plastid	59.05	58.13
CDX84428	Canola	mitochondrion	53.9	57.71
CDY41525	Canola	mitochondrion	53.76	57.24
Bra038650.1-P	Field mustard	mitochondrion	53.63	54.64
GSMUA_Achr8P04210_001	Banana	cytosol	53.37	54.59
Bra009355.1-P	Field mustard	mitochondrion, plastid	54.43	54.07
KRH06491	Soybean	nucleus	57.33	53.85
Zm00001d046097_P001	Maize	mitochondrion	65.39	52.88
Os06t0526600-01	Rice	mitochondrion	63.01	51.68
TraesCS7D01G328100.1	Wheat	mitochondrion	64.6	50.99
TraesCS7A01G350700.1	Wheat	mitochondrion	64.6	50.52
TraesCS7B01G232200.1	Wheat	mitochondrion	64.47	50.36
Solyc01g095740.2.1	Tomato	nucleus	57.73	50.23
PGSC0003DMT400000611	Potato	mitochondrion	56.67	49.25
AT5G08610.1	Thale cress	mitochondrion, plastid	55.22	49.18
CDY21554	Canola	mitochondrion	53.37	29.73
CDX69935	Canola	mitochondrion	53.76	29.51
GSMUA_Achr10P...	Banana	cytosol	19.95	29.21
GSMUA_Achr7P07500_001	Banana	cytosol, nucleus, peroxisome	19.42	26.34
GSMUA_Achr5P09910_001	Banana	nucleus	16.25	25.95
GSMUA_Achr7P18160_001	Banana	nucleus	17.44	22.6
GSMUA_Achr8P01870_001	Banana	cytosol	18.36	21.35
GSMUA_Achr6P00390_001	Banana	cytosol, mitochondrion	19.29	19.89
GSMUA_Achr8P12970_001	Banana	nucleus	19.42	19.19
GSMUA_Achr8P34380_001	Banana	cytosol	17.17	17.88
GSMUA_Achr5P10150_001	Banana	nucleus	16.64	16.36
GSMUA_Achr9P14580_001	Banana	nucleus	17.17	15.83

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr10G26490_001
EnsemblPlants:GSMUA_Achr10P26490_001	EnsemblPlants:GSMUA_Achr10T26490_001	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR014014	UniProt:M0RLM3	InterPro:P-loop_NTPase	PFAM:PF00270	PFAM:PF00271	ScanProsite:PS00039
PFscan:PS51192	PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF528	InterPro:RNA-helicase_DEAD-box_CS
InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI000296B632	SEG:seg

Description

DEAD-box ATP-dependent RNA helicase 31 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26490_001]

Coordinates

chr10:-:30019081..30024619

Molecular Weight (calculated)

83870.9 Da

IEP (calculated)

9.697

GRAVY (calculated)

-0.527

Length

757 amino acids

Sequence
(BLAST)

001: MVSRILALRL LRAAGAIRPS RSFVGPAAAL FRLECPSYVS SDPAIDDSVG YRSFSSRPVR PKAGVGSRGH RGGDFKSRGA AGQAKSLVED EAELNDWVSG
101: LRNDSFRLGL SSDNEDSVAD RSMGDKGRGR DGYSNRFRSR SGKGDSFRST KDKAPSRRQW DDDFDDFSRA SNRGRSQSSR NAPAKKHQQT MPSTFSRRGG
201: RDSESKFKKT IGGRRSVILE SEGEEVEEIE DDHDLSASDD DIFSDEDEKE VSAKDILTNF GSPKQEQGDD GQPLPKKSTE GDNSYLSQTR FDECSISPLT
301: LRGVKAAGYE RMTQVQEATL PLILKGKDVL AKAKTGTGKT VAFLLPAIEV VSKLPPVERD QRRPPINVLV VCPTRELADQ AAAEANQLLK YHPSIGVQVV
401: MGGTRLALEQ KRMQTNPCQI LVATPGRLRD HIENTPGFAT RLMGVKVLVL DEADRLLDMG FRKDIEKIVA AVPKQRQTLL FSATVPDEVR QICYIAMKRD
501: LEFVNTVGEG TEETHSQVKQ MHLVAPLEKQ FSILYNILTE HISGNVDYKV IVFCTTAMAT KLVADLLSEL KLNVREIHSR KPQSYRTRVS KEFKESKGLI
601: LVSSDVSARG VDYPNVTLVI QLGVPADREQ YIHRLGRTGR KGQEGTGILM LAPWEDFFLS TIKDLPITKA SLPTVDLDTR KKVERALGHV ELKSKESAYQ
701: AWLGYYNSNK NIGRDKYQLV ALANEFSRSM GLDNPPAVPK LVLRKMGLNN VPGLRAK

Best Arabidopsis Sequence Match ( AT5G63630.2 )
(BLAST)

001: MPLNFPLRIR FFAHSLSGTH LSYNTSSSVP LLFRIFSSGL NHFEFGSRIN FSTRPNRDQP EFERRIRDGG EIRASKSLIE DEEELSNWVS GFRTGSSRGI
101: LKSDDEDEED RSRGRNQEKR GIRNQVDSFR NKRYGGDRER GFNSRIQGKS SEASFRGRKE TSFSRDREDE KGLRKREDLR LEDESSDEDV KSLVMGDIGD
201: LLSEDDEEED QDYDFLKKKA VSAFGFDKEN VIEADKTRNA NDSYLTKTRF DHYPLSPLSL KAIKDAGYET MTVVQEATLP IILKGKDVLA KAKTGTGKTV
301: AFLLPSIEVV VKSPPTSPDN KRPPILALVI CPTRELANQA ATEANTLLKY HPSIGVQVVI GGTRLGLEQK RMQTNPCQIL VATPGRLKDH IENTPGFATR
401: LKGVKVLVLD EADHLLDMGF RKDIERIISA VPKERQTFLF SATVPEEVRQ ICLVALRRDH EFVNCVHEGT IETHQQVRQM HMIASLDRHF SLLYTLLREH
501: IMGNVDYKVI VFCTTAMVTK LVADLLGELN LNVREIHSRK PQSYRTRVSN EFRKSKGLIL VTSDVSARGV DYPDVTLVLQ VGLPKDREQY IHRLGRTGRK
601: GKEGEGILLL APWEEYFLSS LKDLPITKSP LPSIDPETVK KVQKALCHVE MRNKEAAYQA WLGYYNSQKM IGRDKDRLVE LANEFSRSMG LDNPPAIPKL
701: ILGKMGLKNV PGLRAK

Arabidopsis Description

RH31DEAD-box ATP-dependent RNA helicase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.