Factsheet for AT5G63630.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41525	Canola	mitochondrion	84.92	85.51
CDX84428	Canola	mitochondrion	83.8	84.87
Bra038650.1-P	Field mustard	mitochondrion	84.78	81.7
AT5G08620.1	Thale cress	nucleus	56.42	71.76
Os01t0618500-01	Rice	nucleus	48.88	65.3
EES03287	Sorghum	cytosol	49.72	63.46
HORVU3Hr1G054730.1	Barley	cytosol, mitochondrion, nucleus, plastid	47.07	62.64
Os01t0618400-01	Rice	nucleus, plasma membrane	51.4	61.95
Zm00001d044208_P001	Maize	plastid	50.56	61.77
KRH47920	Soybean	nucleus	60.61	61.74
EES01082	Sorghum	mitochondrion, plastid	50.56	61.56
TraesCS3A01G222500.1	Wheat	nucleus, plastid	46.23	61.52
TraesCS3B01G252700.2	Wheat	nucleus	40.78	61.22
TraesCS3D01G230300.1	Wheat	nucleus	45.95	61.15
Zm00001d044203_P001	Maize	plasma membrane	47.77	61.07
AT5G08610.1	Thale cress	mitochondrion, plastid	72.49	61.06
TraesCS3D01G230400.2	Wheat	mitochondrion	49.86	60.71
TraesCS3B01G252600.1	Wheat	plastid	49.44	60.51
TraesCS3A01G222700.1	Wheat	mitochondrion	49.44	60.2
VIT_15s0046g01010.t01	Wine grape	plastid	63.41	59.04
OQU76491	Sorghum	nucleus	53.35	58.23
GSMUA_Achr10P...	Banana	mitochondrion	58.66	55.48
KRH06491	Soybean	nucleus	60.75	53.97
GSMUA_Achr8P04210_001	Banana	cytosol	54.75	52.97
Solyc01g095740.2.1	Tomato	nucleus	63.13	51.95
PGSC0003DMT400000611	Potato	mitochondrion	61.17	50.29
Zm00001d046097_P001	Maize	mitochondrion	57.12	43.7
TraesCS7D01G328100.1	Wheat	mitochondrion	57.68	43.07
TraesCS7B01G232200.1	Wheat	mitochondrion	58.1	42.93
TraesCS7A01G350700.1	Wheat	mitochondrion	57.82	42.77
Os06t0526600-01	Rice	mitochondrion	54.89	42.58
AT1G63250.1	Thale cress	mitochondrion	42.32	37.97
AT2G07750.1	Thale cress	plastid	40.92	34.67
AT5G60990.1	Thale cress	nucleus	18.3	28.73
AT3G18600.1	Thale cress	nucleus	21.51	27.11
AT1G16280.1	Thale cress	nucleus	17.88	26.07
AT5G65900.1	Thale cress	nucleus	21.93	24.8
AT1G71370.1	Thale cress	nucleus	18.99	24.37
AT2G40700.1	Thale cress	nucleus	20.11	23.61
AT1G71280.1	Thale cress	nucleus	14.94	23.01
AT5G05450.1	Thale cress	nucleus	18.99	22.93
AT5G54910.1	Thale cress	nucleus	20.67	20.03
AT4G16630.1	Thale cress	nucleus	21.65	19.65
AT3G16840.2	Thale cress	nucleus	20.39	17.65
AT1G77030.1	Thale cress	nucleus	17.32	14.67

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:836483	EMBL:AJ010477	ProteinID:ANM68626.1	ArrayExpress:AT5G63630
EnsemblPlantsGene:AT5G63630	RefSeq:AT5G63630	TAIR:AT5G63630	RefSeq:AT5G63630-TAIR-G	EnsemblPlants:AT5G63630.2	ProteinID:BAB10456.1
InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004004	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010501	GO:GO:0016787	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	RefSeq:NP_001318870.1	RefSeq:NP_201168.3	InterPro:P-loop_NTPase
PFAM:PF00270	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031
PANTHER:PTHR24031:SF528	UniProt:Q9FFQ1	InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540
UniParc:UPI0000D7C26C	SEG:seg	:	:	:	:

Description

RH31DEAD-box ATP-dependent RNA helicase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ1]

Coordinates

chr5:-:25472447..25475927

Molecular Weight (calculated)

81088.1 Da

IEP (calculated)

9.218

GRAVY (calculated)

-0.539

Length

716 amino acids

Sequence
(BLAST)

001: MPLNFPLRIR FFAHSLSGTH LSYNTSSSVP LLFRIFSSGL NHFEFGSRIN FSTRPNRDQP EFERRIRDGG EIRASKSLIE DEEELSNWVS GFRTGSSRGI
101: LKSDDEDEED RSRGRNQEKR GIRNQVDSFR NKRYGGDRER GFNSRIQGKS SEASFRGRKE TSFSRDREDE KGLRKREDLR LEDESSDEDV KSLVMGDIGD
201: LLSEDDEEED QDYDFLKKKA VSAFGFDKEN VIEADKTRNA NDSYLTKTRF DHYPLSPLSL KAIKDAGYET MTVVQEATLP IILKGKDVLA KAKTGTGKTV
301: AFLLPSIEVV VKSPPTSPDN KRPPILALVI CPTRELANQA ATEANTLLKY HPSIGVQVVI GGTRLGLEQK RMQTNPCQIL VATPGRLKDH IENTPGFATR
401: LKGVKVLVLD EADHLLDMGF RKDIERIISA VPKERQTFLF SATVPEEVRQ ICLVALRRDH EFVNCVHEGT IETHQQVRQM HMIASLDRHF SLLYTLLREH
501: IMGNVDYKVI VFCTTAMVTK LVADLLGELN LNVREIHSRK PQSYRTRVSN EFRKSKGLIL VTSDVSARGV DYPDVTLVLQ VGLPKDREQY IHRLGRTGRK
601: GKEGEGILLL APWEEYFLSS LKDLPITKSP LPSIDPETVK KVQKALCHVE MRNKEAAYQA WLGYYNSQKM IGRDKDRLVE LANEFSRSMG LDNPPAIPKL
701: ILGKMGLKNV PGLRAK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.