Factsheet for Bra038650.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41525	Canola	mitochondrion	95.29	99.58
AT5G63630.2	Thale cress	mitochondrion, plastid	81.7	84.78
Bra009356.1-P	Field mustard	cytosol	53.16	70.41
Bra028652.1-P	Field mustard	nucleus	50.87	69.87
Bra009355.1-P	Field mustard	mitochondrion, plastid	66.49	64.83
Os01t0618500-01	Rice	nucleus	46.7	64.74
EES03287	Sorghum	cytosol	47.38	62.75
KRH47920	Soybean	nucleus	58.82	62.16
HORVU3Hr1G054730.1	Barley	cytosol, mitochondrion, nucleus, plastid	44.82	61.9
Zm00001d044208_P001	Maize	plastid	48.59	61.6
TraesCS3A01G222500.1	Wheat	nucleus, plastid	44.15	60.97
Os01t0618400-01	Rice	nucleus, plasma membrane	48.59	60.77
TraesCS3D01G230300.1	Wheat	nucleus	43.88	60.59
TraesCS3B01G252700.2	Wheat	nucleus	38.9	60.59
EES01082	Sorghum	mitochondrion, plastid	47.91	60.54
Zm00001d044203_P001	Maize	plasma membrane	45.63	60.54
TraesCS3D01G230400.2	Wheat	mitochondrion	47.38	59.86
TraesCS3A01G222700.1	Wheat	mitochondrion	47.24	59.69
TraesCS3B01G252600.1	Wheat	plastid	46.97	59.66
VIT_15s0046g01010.t01	Wine grape	plastid	60.57	58.52
OQU76491	Sorghum	nucleus	50.47	57.16
KRH06491	Soybean	nucleus	59.22	54.59
GSMUA_Achr10P...	Banana	mitochondrion	54.64	53.63
GSMUA_Achr8P04210_001	Banana	cytosol	51.14	51.35
Solyc01g095740.2.1	Tomato	nucleus	59.89	51.15
PGSC0003DMT400000611	Potato	mitochondrion	58.01	49.48
Zm00001d046097_P001	Maize	mitochondrion	53.7	42.63
TraesCS7B01G232200.1	Wheat	mitochondrion	54.78	42.0
TraesCS7D01G328100.1	Wheat	mitochondrion	54.1	41.92
Os06t0526600-01	Rice	mitochondrion	51.82	41.71
TraesCS7A01G350700.1	Wheat	mitochondrion	54.24	41.63
Bra027808.1-P	Field mustard	mitochondrion	39.03	37.13
Bra029342.1-P	Field mustard	cytosol	17.77	29.2
Bra022336.1-P	Field mustard	nucleus	20.32	26.58
Bra037574.1-P	Field mustard	nucleus	20.19	26.5
Bra024428.1-P	Field mustard	nucleus	20.73	26.06
Bra001713.1-P	Field mustard	nucleus	20.73	25.41
Bra026724.1-P	Field mustard	nucleus	16.42	25.1
Bra009114.1-P	Field mustard	nucleus	19.65	24.54
Bra028757.1-P	Field mustard	nucleus	19.25	24.07
Bra004584.1-P	Field mustard	nucleus	19.52	23.62
Bra021205.1-P	Field mustard	mitochondrion, nucleus, plastid	16.82	19.87
Bra002946.1-P	Field mustard	nucleus	19.52	19.49
Bra040743.1-P	Field mustard	nucleus	20.32	17.28
Bra003691.1-P	Field mustard	cytosol	17.09	14.91
Bra038492.1-P	Field mustard	nucleus	18.04	14.76

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra038650	EnsemblPlants:Bra038650.1	EnsemblPlants:Bra038650.1-P	InterPro:DEAD/DEAH_box_helicase_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005524	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	UniProt:M4FC34	InterPro:P-loop_NTPase
PFAM:PF00270	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031
PANTHER:PTHR24031:SF528	InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI000253F2BE
SEG:seg	:	:	:	:	:

Description

AT5G63630 (E=4e-222) | DEAD box RNA helicase, putative

Coordinates

chrA06:-:14404957..14407817

Molecular Weight (calculated)

83649.1 Da

IEP (calculated)

9.604

GRAVY (calculated)

-0.528

Length

743 amino acids

Sequence
(BLAST)

001: MPLKFPRRIQ FITYPLPRTT NNLASFSSGS RAYHYNTSSS SPLLSRIFSL NHFPIGSHIN FSTRPNGGET RASRSLIEDE EELSNWVTDL RPGSLRVHLT
101: SDDDDDDVDR SRGRNQEFRG TRNKVDSFRE NRFSDRDKGS NFRSSQSSFR GRKERSLGRD REGYKGLRKQ RRGDVLDGES SDEDVKSLVM GGIGDLLSEE
201: DEEEDEDHEF LKKKAASAFG FDKQKGVEAR NDVKSSDSYL TKTRFDQYPL SPLSLKALND AGYETMTVVQ EATLPIILKG KDVLAKAKTG TGKTVAFLLP
301: SIEVVVKSPP TSPDNKRPPI LALVICPTRE LANQAATEAN TLLKHHPTIG VQVVIGGTRL GLEQKRMQTN PCQILVATPG RLKDHIENTP GFETRLKGVK
401: VLVLDEADHL LDMGFRKDIE RILSAVPKER QTFLFSATVP EEVRQMCLVA LRRDHEFINC VHEGTGETHQ QVRQTHMIAS LDKHFSLLYT LLRAHIADNV
501: DYKVIVFCTT AMVTKLVADL LGELNLNLRE IHSRKPQSYR TRVSNEFRKS KGLILVTSDV SARGVDYPDV TLVLQVGLPK DREQYIHRLG RTGRKGKEGE
601: GILVLAPWEE YFLSSLKDLP ITKSSLPSTD PETVKKVKPL SYFTDLGVAS RRLNLEWGIK LVENGMYQVQ KALCHVEMRN KEAAYQAWLG YYNSQKMIGR
701: DKERLVELAN EFSRSMGLDN PPAIPKLILG KMGLKNVPGL RAK

Best Arabidopsis Sequence Match ( AT5G63630.2 )
(BLAST)

001: MPLNFPLRIR FFAHSLSGTH LSYNTSSSVP LLFRIFSSGL NHFEFGSRIN FSTRPNRDQP EFERRIRDGG EIRASKSLIE DEEELSNWVS GFRTGSSRGI
101: LKSDDEDEED RSRGRNQEKR GIRNQVDSFR NKRYGGDRER GFNSRIQGKS SEASFRGRKE TSFSRDREDE KGLRKREDLR LEDESSDEDV KSLVMGDIGD
201: LLSEDDEEED QDYDFLKKKA VSAFGFDKEN VIEADKTRNA NDSYLTKTRF DHYPLSPLSL KAIKDAGYET MTVVQEATLP IILKGKDVLA KAKTGTGKTV
301: AFLLPSIEVV VKSPPTSPDN KRPPILALVI CPTRELANQA ATEANTLLKY HPSIGVQVVI GGTRLGLEQK RMQTNPCQIL VATPGRLKDH IENTPGFATR
401: LKGVKVLVLD EADHLLDMGF RKDIERIISA VPKERQTFLF SATVPEEVRQ ICLVALRRDH EFVNCVHEGT IETHQQVRQM HMIASLDRHF SLLYTLLREH
501: IMGNVDYKVI VFCTTAMVTK LVADLLGELN LNVREIHSRK PQSYRTRVSN EFRKSKGLIL VTSDVSARGV DYPDVTLVLQ VGLPKDREQY IHRLGRTGRK
601: GKEGEGILLL APWEEYFLSS LKDLPITKSP LPSIDPETVK KVQKALCHVE MRNKEAAYQA WLGYYNSQKM IGRDKDRLVE LANEFSRSMG LDNPPAIPKL
701: ILGKMGLKNV PGLRAK

Arabidopsis Description

RH31DEAD-box ATP-dependent RNA helicase 31 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFQ1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.