Factsheet for AT2G07750.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G63250.1	Thale cress	mitochondrion	89.23	94.49
CDY49890	Canola	mitochondrion	79.17	85.77
Bra027808.1-P	Field mustard	mitochondrion	78.82	85.28
CDY45370	Canola	mitochondrion	78.58	84.91
GSMUA_Achr3P14380_001	Banana	cytosol	37.51	70.92
KRH41139	Soybean	nucleus	53.02	63.37
VIT_02s0025g03950.t01	Wine grape	mitochondrion	55.38	62.07
VIT_06s0004g07260.t01	Wine grape	extracellular, vacuole	11.01	58.12
Solyc12g056340.1.1	Tomato	cytosol, nucleus, plastid	53.25	55.9
PGSC0003DMT400010896	Potato	cytosol, nucleus, plastid	53.25	55.83
KRH59841	Soybean	nucleus	33.02	52.74
Os02t0826100-01	Rice	cytosol	49.82	51.91
EES07789	Sorghum	mitochondrion	50.53	51.88
Zm00001d018516_P002	Maize	mitochondrion	49.11	50.73
TraesCS6D01G392700.1	Wheat	cytosol	48.52	48.69
TraesCS6B01G455000.1	Wheat	cytosol	48.28	48.4
AT5G08620.1	Thale cress	nucleus	31.95	47.96
HORVU6Hr1G093300.7	Barley	cytosol, nucleus	42.72	47.5
TraesCS6A01G409100.1	Wheat	cytosol	48.28	46.05
AT5G63630.2	Thale cress	mitochondrion, plastid	34.67	40.92
AT5G08610.1	Thale cress	mitochondrion, plastid	36.09	35.88
AT3G18600.1	Thale cress	nucleus	17.99	26.76
AT5G60990.1	Thale cress	nucleus	13.85	25.66
AT1G16280.1	Thale cress	nucleus	14.79	25.46
AT5G65900.1	Thale cress	nucleus	18.11	24.17
AT1G71280.1	Thale cress	nucleus	13.14	23.87
AT1G71370.1	Thale cress	nucleus	15.74	23.84
AT5G05450.1	Thale cress	nucleus	15.15	21.59
AT2G40700.1	Thale cress	nucleus	15.38	21.31
AT5G54910.1	Thale cress	nucleus	17.4	19.89
KRH54980	Soybean	nucleus	3.91	18.54
AT4G16630.1	Thale cress	nucleus	16.33	17.49
AT3G16840.2	Thale cress	nucleus	16.57	16.93
AT1G77030.1	Thale cress	nucleus	12.9	12.9

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:815422	ProteinID:AAC26676.1	ProteinID:AEC06130.1	ArrayExpress:AT2G07750
EnsemblPlantsGene:AT2G07750	RefSeq:AT2G07750	TAIR:AT2G07750	RefSeq:AT2G07750-TAIR-G	EnsemblPlants:AT2G07750.1	TAIR:AT2G07750.1
Unigene:At.52694	ncoils:Coil	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004004	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010501	GO:GO:0016787
InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	RefSeq:NP_178818.1
UniProt:O80792	InterPro:P-loop_NTPase	PFAM:PF00270	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194
PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF324	InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490
SUPFAM:SSF52540	UniParc:UPI00000A705E	SEG:seg	:	:	:

Description

RH33Putative DEAD-box ATP-dependent RNA helicase 33 [Source:UniProtKB/Swiss-Prot;Acc:O80792]

Coordinates

chr2:+:3576465..3580525

Molecular Weight (calculated)

94891.6 Da

IEP (calculated)

10.044

GRAVY (calculated)

-0.504

Length

845 amino acids

Sequence
(BLAST)

001: MAMAMRLPAI SRAVTEVASS PVGLRRLFCS NASRFSFLSP PARRQAEPST NLFHSGLSKR ITSERSLWNR IFSRNMGGGP RTFPGGLNKW QWKRMHEKKA
101: REKENKLLDQ EKQLYEARIR TEIRAKMWGH PDSGEKTAKL KQSHGPMSPK EHIKTLADRF MKAGADDLWN DNDGPVKKFD QGSRSCSDSI DSTPIDVRRL
201: VSATCDSMGK HRVLDSSRRG FSSMSRFKRN ESSCDEGDDV DAKKLDTLSP FSPKFSGTKE KVKSSTSVVG VIRNKGLFGR RKFRKNDSST EEDSDEEGNE
301: GKMIGWMDLR KTGSSASLGN HDIKLTKRVN RNVTDEELYP PLDINRVRED LSKKQSVDNV MEEKQEPHDS IYSAKRFDES CISPLTLKAL SASGIVKMTR
401: VQDATLSECL DGKDALVKAK TGTGKSMAFL LPAIETVLKA MNSGKGVHKV APIFVLILCP TRELASQIAA EGKALLKNHD GIGVQTLIGG TRFRLDQQRL
501: ESEPCQILIA TPGRLLDHIE NKSGLTSRLM ALKLFIVDEA DLLLDLGFKR DVEKIIDCLP RQRQSLLFSA TIPKEVRRVS QLVLKRDHSY IDTIGLGCVE
601: THDKVKQSCI VAPHESHFHL VPHLLKEHIN NMPDYKIIVF CSTGMVTSLM YTLLREMKLN VREIHARKPQ LHRTCVSDEF KESNRLILVT SDVSARGMNY
701: PDVTLVIQVG IPSDREQYIH RLGRTGREGK GGKGLLLIAP WERYFLDELK DLPLEPIPAP DLDSRVKHQV DQSMAKIDTS IKEAAYHAWL GYYNSVRETG
801: RDKTTLAELA NRFCHSIGLE KPPALFRRTA VKMGLKGISG IPIRK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.