CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48208	Soybean	nucleus	75.28	16.54
KRH65117	Soybean	plastid	76.4	16.5
VIT_06s0004g07260.t01	Wine grape	extracellular, vacuole	12.92	14.38
KRH48210	Soybean	nucleus	18.54	10.31
KRH65120	Soybean	cytosol	18.54	7.52
GSMUA_Achr3P14380_001	Banana	cytosol	17.98	7.16
KRH37947	Soybean	plastid	21.91	6.62
KRH12590	Soybean	nucleus	17.98	5.89
KRH62970	Soybean	nucleus	17.42	5.72
KRH14417	Soybean	cytosol, nucleus	16.85	5.68
KRH54795	Soybean	nucleus	17.42	5.67
KRG97683	Soybean	nucleus	18.54	5.6
KRH56711	Soybean	nucleus	17.42	5.42
KRH03838	Soybean	nucleus	17.42	5.39
KRH43700	Soybean	cytosol	17.42	5.29
KRH13749	Soybean	cytosol, plastid	17.42	5.25
KRH46113	Soybean	nucleus	21.91	5.15
KRG98832	Soybean	nucleus	21.91	5.14
KRH31184	Soybean	nucleus	18.54	4.96
KRH47920	Soybean	nucleus	19.1	4.84
KRH37539	Soybean	nucleus	14.61	4.82
KRH41139	Soybean	nucleus	18.54	4.67
CDY49890	Canola	mitochondrion	18.54	4.23
Bra027808.1-P	Field mustard	mitochondrion	18.54	4.23
Solyc12g056340.1.1	Tomato	cytosol, nucleus, plastid	19.1	4.22
CDY45370	Canola	mitochondrion	18.54	4.22
PGSC0003DMT400010896	Potato	cytosol, nucleus, plastid	19.1	4.22
KRH06491	Soybean	nucleus	19.1	4.22
HORVU6Hr1G093300.7	Barley	cytosol, nucleus	17.98	4.21
AT1G63250.1	Thale cress	mitochondrion	18.54	4.14
VIT_02s0025g03950.t01	Wine grape	mitochondrion	17.42	4.11
KRH73730	Soybean	nucleus	16.85	4.02
TraesCS6D01G392700.1	Wheat	cytosol	18.54	3.92
TraesCS6B01G455000.1	Wheat	cytosol	18.54	3.91
AT2G07750.1	Thale cress	plastid	18.54	3.91
Os02t0826100-01	Rice	cytosol	17.42	3.82
TraesCS6A01G409100.1	Wheat	cytosol	18.54	3.72
KRH64859	Soybean	nucleus	15.73	3.6
KRH09570	Soybean	nucleus	15.73	3.6
EES07789	Sorghum	mitochondrion	16.29	3.52
Zm00001d018516_P002	Maize	mitochondrion	15.17	3.3
KRH59841	Soybean	nucleus	1.12	0.38
KRH37970	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02003674	EnsemblPlants:KRH54980	EnsemblPlantsGene:GLYMA_06G223200	Gene3D:3.40.50.300	InterPro:Helicase_C	InterPro:IPR001650
InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR24031	PANTHER:PTHR24031:SF91	PFAM:PF00271	PFscan:PS51194
ProteinID:KRH54980	ProteinID:KRH54980.1	SEG:seg	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI000294BFD5
UniProt:K7KWL9	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:29480092..29481343

Molecular Weight (calculated)

20409.9 Da

IEP (calculated)

10.085

GRAVY (calculated)

-0.305

Length

178 amino acids

Sequence
(BLAST)

001: MDRFHENENG ILVATDVAAR GLDILGVRIV VHYQLPHSAE GYVHRSGRTT RAFAEGCSIA LISSRDTSKF VSLCKSFSKD KKNWFDRNAS SLELVTENYD
101: SEEAQVNKHK QMKTISRQLK KLQKELEMLI LHPLQSKTFL HRYLAGALSL LLMVLKEIQT LLQKGYTKMV LKEIQTRF

Best Arabidopsis Sequence Match ( AT3G16840.1 )
(BLAST)

001: MVTGDKESSL MKKRNKRSHK RKREEDFERI DSLPWSSSIP IGEDDEGESF STLFSGSGQL DGGFLSLEEI DEADYHLTLP TIESEITERK QSPEDDDDTN
101: ETVDEMIEGE EAEEDGEGRD DEDDEDDEET RKKKEKKAKR NKEKKKEKKK KKQKKINEAA KNQDASAVSC DGDDTVEEQV EEEEIPPEFS AWSSMRLHPL
201: LMKSIYRLDF KEPTKIQKAC FNVAAYQGKD VIGAAETGSG KTLAFGLPIL QRLLDEREKV GKLYALKGEE AQKYAADGYL RALIITPTRE LALQVTEHLE
301: NAAKNLSVKV VPIVGGMFSE KQERRLKEKP EIVVATPGRL WELMSAGEKH LVELHSLSFF VLDEADRMVE RGHFRELQSI LDLLPVTDKP NEGKTQTVKS
401: NDTVLNVPKK KRQTFVFSAT IALSSDFRKK LKRGSSKSKQ SSSGEVNSIE VLSERAGMRD NVAIIDLTTT SILAPKIEES FIKCEEKEKD AYLYYILSVH
501: GQGRTIVFCT SVTDLRHISG LLKILGLDVC TLFSEMKQRA RLKSIDRFRA SENGILIATD LVARGIDIKN VRTIIHYKLP HSAEVYVHRC GRTARAFADG
601: CSIALIEPNE TSKFYTLCKS FSMESVKIFP LDNSYMPAVR KRLYLARQIY EIERKGSREN ADRTWLKKHA ESMELELDDE ESEEERVDNV RQRKATSARL
701: NKLKEELSTL LSHPMQPKKF SGRYFAGVGV STLMQNQFVE LKKQKQAQMQ IGGDIKRRKL VVINQNCIEP LQALRAGGNE MLKMKGQSAE KRRDIASLKK
801: KRKEEKIGRR DQRRNQKKQR KLMASS

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A178VJW0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.