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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G313300.1 Wheat nucleus 91.59 91.59
TraesCS7D01G309800.1 Wheat nucleus 92.23 91.35
TraesCS5B01G120400.1 Wheat nucleus 65.7 35.0
GSMUA_Achr10P... Banana cytosol 58.25 34.82
GSMUA_Achr7P07500_001 Banana cytosol, nucleus, peroxisome 56.31 31.18
KRH62970 Soybean nucleus 52.43 29.89
TraesCS6B01G342900.1 Wheat nucleus 52.75 29.85
VIT_17s0000g04310.t01 Wine grape cytosol 52.43 29.45
KRH54795 Soybean nucleus 51.13 28.88
Solyc03g114370.2.1 Tomato nucleus 52.1 28.45
PGSC0003DMT400063252 Potato nucleus 51.78 28.27
KRH56711 Soybean nucleus 52.1 28.15
KRH03838 Soybean nucleus 51.78 27.83
CDX99342 Canola nucleus 45.63 24.82
Bra022336.1-P Field mustard nucleus 45.63 24.82
CDX92251 Canola nucleus 45.63 24.78
CDX82336 Canola nucleus 45.63 24.61
Bra037574.1-P Field mustard nucleus 44.98 24.56
CDY18530 Canola nucleus 44.98 24.47
CDX95512 Canola nucleus 44.98 24.39
CDX75974 Canola nucleus 45.63 24.23
Bra024428.1-P Field mustard nucleus 45.95 24.03
CDY36514 Canola nucleus 45.31 24.01
CDY08740 Canola nucleus 45.95 23.91
AT3G18600.1 Thale cress nucleus 43.69 23.77
Bra001713.1-P Field mustard nucleus 45.63 23.27
AT5G65900.1 Thale cress nucleus 45.63 22.27
TraesCS1B01G037600.1 Wheat nucleus 28.48 14.29
TraesCS3B01G116900.1 Wheat plastid 24.6 11.82
TraesCS2B01G247500.1 Wheat nucleus 27.51 11.14
TraesCS3B01G252600.1 Wheat plastid 21.04 11.11
TraesCS6B01G142500.1 Wheat mitochondrion, nucleus 17.15 11.04
TraesCS3B01G252700.2 Wheat nucleus 16.18 10.48
TraesCS2B01G150800.1 Wheat mitochondrion 17.48 10.47
TraesCS2B01G179900.1 Wheat cytosol 15.86 9.59
TraesCS4B01G341100.1 Wheat plastid 21.36 7.73
TraesCS6B01G455000.1 Wheat cytosol 20.06 7.35
TraesCS7B01G232200.1 Wheat mitochondrion 22.01 7.02
TraesCS5B01G378100.1 Wheat nucleus 17.48 6.93
TraesCS2B01G384300.1 Wheat nucleus 16.83 6.23
Protein Annotations
EnsemblPlants:TraesCS7B01G213800.1EnsemblPlantsGene:TraesCS7B01G213800Gene3D:3.40.50.300InterPro:DUF4217InterPro:Helicase_CInterPro:IPR001650
InterPro:P-loop_NTPasePANTHER:PTHR24031PANTHER:PTHR24031:SF305PFAM:PF00271PFAM:PF13959PFscan:PS51194
SEG:segSMART:SM00490SMART:SM01178SUPFAM:SSF52540TIGR:cd00079MapMan:35.1
Description
No Description!
Coordinates
chr7B:+:392801735..392803405
Molecular Weight (calculated)
34725.4 Da
IEP (calculated)
9.054
GRAVY (calculated)
-0.427
Length
309 amino acids
Sequence
(BLAST)
001: MSPAAASMGS AERSTESEQT VYDTAAAVET GQEMQEPASQ TGVGRQANTE GLQLGYSVVP SEKRFLVLHA FLKRKQSSKK VMVLFSSRSS VKFHAQLLNF
101: LQIECADIHE KQEQRDRTAT FFAFCTAEKG ILLCTNVAAR GLDLPHVDYI VQYDPPADEP EDYIHHVGRT APGDKGKATV LLFLLPQELE FLISLRAANI
201: HLTEHQFNNK NVPNLQAHFE KIIGENYFLH QSAQQAYRSY ILAYNSHAMK DIFKVHSLSL KDVAASFCFR NPPKVDIGLE GRAMKKVGYN RGLDSRERRK
301: RRRINAANP
Best Arabidopsis Sequence Match ( AT3G18600.1 )
(BLAST)
001: MVESDKSSVE ELKKRVRKRS RGKKNEQQKA EEKTHTVEEN ADETQKKSEK KVKKVRGKIE EEEEKVEAME DGEDEKNIVI VGKGIMTNVT FDSLDLSEQT
101: SIAIKEMGFQ YMTQIQAGSI QPLLEGKDVL GAARTGSGKT LAFLIPAVEL LFKERFSPRN GTGVIVICPT RELAIQTKNV AEELLKHHSQ TVSMVIGGNN
201: RRSEAQRIAS GSNLVIATPG RLLDHLQNTK AFIYKHLKCL VIDEADRILE ENFEEDMNKI LKILPKTRQT ALFSATQTSK VKDLARVSLT SPVHVDVDDG
301: RRKVTNEGLE QGYCVVPSKQ RLILLISFLK KNLNKKIMVF FSTCKSVQFH TEIMKISDVD VSDIHGGMDQ NRRTKTFFDF MKAKKGILLC TDVAARGLDI
401: PSVDWIIQYD PPDKPTEYIH RVGRTARGEG AKGKALLVLI PEELQFIRYL KAAKVPVKEL EFNEKRLSNV QSALEKCVAK DYNLNKLAKD AYRAYLSAYN
501: SHSLKDIFNV HRLDLLAVAE SFCFSSPPKV NLNIESGAGK VRKARKQQGR NGFSPYSPYG KSTPTKEA
Arabidopsis Description
RH51DEAD-box ATP-dependent RNA helicase 51 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIH9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.