Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028856.1-P | Field mustard | mitochondrion | 99.3 | 99.3 |
| CDY55693 | Canola | cytosol, mitochondrion | 95.07 | 99.26 |
| Bra009557.1-P | Field mustard | cytosol, mitochondrion | 95.07 | 99.26 |
| CDX70336 | Canola | cytosol, mitochondrion | 95.07 | 99.26 |
| CDX80847 | Canola | cytosol, mitochondrion | 95.07 | 99.26 |
| CDY04874 | Canola | cytosol, mitochondrion | 95.07 | 99.26 |
| CDY11236 | Canola | cytosol, mitochondrion | 95.07 | 99.26 |
| Bra005745.1-P | Field mustard | cytosol, mitochondrion | 94.37 | 98.53 |
| Zm00001d010566_P001 | Maize | plasma membrane | 96.48 | 96.48 |
| Zm00001d034628_P001 | Maize | mitochondrion | 96.48 | 96.48 |
| VIT_13s0019g03640.t01 | Wine grape | mitochondrion | 96.48 | 96.48 |
| Solyc10g086020.1.1 | Tomato | plastid | 96.48 | 96.48 |
| Solyc10g084310.1.1 | Tomato | mitochondrion | 96.48 | 96.48 |
| Solyc09g007350.2.1 | Tomato | mitochondrion | 96.48 | 96.48 |
| PGSC0003DMT400065339 | Potato | mitochondrion | 96.48 | 96.48 |
| PGSC0003DMT400045338 | Potato | extracellular | 96.48 | 96.48 |
| PGSC0003DMT400027147 | Potato | mitochondrion | 96.48 | 96.48 |
| PGSC0003DMT400004414 | Potato | mitochondrion | 96.48 | 96.48 |
| Zm00001d042966_P001 | Maize | mitochondrion | 96.48 | 96.48 |
| EER90632 | Sorghum | mitochondrion | 96.48 | 96.48 |
| EES03842 | Sorghum | mitochondrion | 96.48 | 96.48 |
| EES19663 | Sorghum | mitochondrion | 96.48 | 96.48 |
| Zm00001d012978_P001 | Maize | extracellular | 92.25 | 96.32 |
| VIT_08s0040g02420.t01 | Wine grape | mitochondrion | 95.77 | 95.77 |
| AT3G09680.1 | Thale cress | mitochondrion | 95.77 | 95.77 |
| Os01t0834500-01 | Rice | mitochondrion | 95.77 | 95.77 |
| Os03t0818400-01 | Rice | nucleus | 95.77 | 95.77 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 91.55 | 95.59 |
| KRG95930 | Soybean | mitochondrion | 95.07 | 95.07 |
| KRH32405 | Soybean | nucleus | 95.07 | 95.07 |
| KRH67642 | Soybean | mitochondrion | 95.07 | 95.07 |
| KRH19812 | Soybean | nucleus | 94.37 | 94.37 |
| HORVU1Hr1G071570.3 | Barley | mitochondrion | 94.37 | 93.06 |
| KRH24942 | Soybean | cytosol | 83.1 | 92.19 |
| KRG89057 | Soybean | mitochondrion | 78.87 | 91.06 |
| Solyc11g013160.1.1 | Tomato | cytosol | 37.32 | 86.89 |
| Os10t0350001-00 | Rice | cytosol, extracellular | 27.46 | 86.67 |
| HORVU5Hr1G112390.2 | Barley | mitochondrion | 94.37 | 86.45 |
| Solyc06g005110.2.1 | Tomato | mitochondrion, nucleus | 38.03 | 83.08 |
| VIT_06s0004g03410.t01 | Wine grape | cytosol | 95.07 | 82.82 |
| CDY10413 | Canola | mitochondrion | 99.3 | 77.47 |
| GSMUA_Achr3P01170_001 | Banana | mitochondrion, plastid | 95.77 | 75.98 |
| GSMUA_Achr5P14800_001 | Banana | cytosol, mitochondrion | 95.77 | 75.14 |
| GSMUA_Achr4P17160_001 | Banana | cytosol, mitochondrion | 59.86 | 74.56 |
| Zm00001d028137_P001 | Maize | cytosol | 26.76 | 74.51 |
| GSMUA_Achr2P23030_001 | Banana | mitochondrion | 95.77 | 73.91 |
| HORVU3Hr1G087380.1 | Barley | mitochondrion, plastid | 95.77 | 72.34 |
| Solyc06g011510.1.1 | Tomato | cytosol | 25.35 | 72.0 |
| GSMUA_Achr2P22920_001 | Banana | mitochondrion | 83.1 | 68.21 |
| Zm00001d036211_P001 | Maize | endoplasmic reticulum | 45.77 | 59.09 |
| HORVU6Hr1G043260.1 | Barley | mitochondrion | 34.51 | 55.68 |
| KRH55344 | Soybean | cytosol | 50.7 | 49.66 |
| Os10t0350450-00 | Rice | mitochondrion | 61.27 | 46.77 |
| Zm00001d044342_P002 | Maize | cytosol, mitochondrion | 59.15 | 35.59 |
| Zm00001d018970_P001 | Maize | cytosol | 47.18 | 26.48 |
| Zm00001d048114_P001 | Maize | cytosol | 74.65 | 20.7 |
Protein Annotations
| MapMan:17.1.3.1.24 | Gene3D:2.40.50.140 | EntrezGene:831724 | UniProt:A0A178UNB4 | ProteinID:AED90540.1 | ArrayExpress:AT5G02960 |
| EnsemblPlantsGene:AT5G02960 | RefSeq:AT5G02960 | TAIR:AT5G02960 | RefSeq:AT5G02960-TAIR-G | EnsemblPlants:AT5G02960.1 | TAIR:AT5G02960.1 |
| EMBL:AY039983 | EMBL:AY052330 | EMBL:AY113931 | Unigene:At.22945 | ProteinID:CAB86050.1 | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 | GO:GO:0022626 | GO:GO:0022627 | GO:GO:0030529 |
| GO:GO:0042788 | InterPro:NA-bd_OB-fold | RefSeq:NP_195916.1 | ProteinID:OAO95566.1 | UniProt:P49201 | PFAM:PF00164 |
| PIRSF:PIRSF002133 | PO:PO:0000293 | PO:PO:0009025 | ScanProsite:PS00055 | PANTHER:PTHR11652 | PANTHER:PTHR11652:SF37 |
| InterPro:Ribosomal_S12/S23 | InterPro:Ribosomal_S23_euk/arc | SUPFAM:SSF50249 | TIGRFAMs:TIGR00982 | UniParc:UPI0000132F6B | EMBL:Z17759 |
Description
RPS23B40S ribosomal protein S23-2 [Source:UniProtKB/Swiss-Prot;Acc:P49201]
Coordinates
chr5:-:693079..694515
Molecular Weight (calculated)
15736.4 Da
IEP (calculated)
11.112
GRAVY (calculated)
-0.539
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTRGMGAG RKLKRLRINQ RWADKQYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.