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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72262 Canola cytosol 45.1 48.94
Solyc11g013160.1.1 Tomato cytosol 47.06 39.34
Solyc06g011510.1.1 Tomato cytosol 37.25 38.0
KRG89057 Soybean mitochondrion 72.55 30.08
Zm00001d012978_P001 Maize extracellular 76.47 28.68
CDY71254 Canola plastid 70.59 28.35
Bra005745.1-P Field mustard cytosol, mitochondrion 74.51 27.94
Bra009557.1-P Field mustard cytosol, mitochondrion 74.51 27.94
CDY55693 Canola cytosol, mitochondrion 74.51 27.94
CDX70336 Canola cytosol, mitochondrion 74.51 27.94
CDX73991 Canola cytosol, mitochondrion 74.51 27.94
CDX80847 Canola cytosol, mitochondrion 74.51 27.94
CDY11236 Canola cytosol, mitochondrion 74.51 27.94
CDY04874 Canola cytosol, mitochondrion 74.51 27.94
CDY07936 Canola cytosol, mitochondrion 74.51 27.94
Zm00001d042966_P001 Maize mitochondrion 76.47 27.46
Zm00001d010566_P001 Maize plasma membrane 76.47 27.46
Zm00001d034628_P001 Maize mitochondrion 76.47 27.46
KRH24942 Soybean cytosol 68.63 27.34
KRH32405 Soybean nucleus 74.51 26.76
KRH19812 Soybean nucleus 74.51 26.76
KRG95930 Soybean mitochondrion 74.51 26.76
PGSC0003DMT400027147 Potato mitochondrion 74.51 26.76
PGSC0003DMT400004414 Potato mitochondrion 74.51 26.76
PGSC0003DMT400045338 Potato extracellular 74.51 26.76
KRH67642 Soybean mitochondrion 74.51 26.76
AT5G02960.1 Thale cress mitochondrion 74.51 26.76
AT3G09680.1 Thale cress mitochondrion 74.51 26.76
PGSC0003DMT400065339 Potato mitochondrion 74.51 26.76
Solyc09g007350.2.1 Tomato mitochondrion 74.51 26.76
Solyc10g084310.1.1 Tomato mitochondrion 74.51 26.76
Solyc10g086020.1.1 Tomato plastid 74.51 26.76
VIT_08s0040g02420.t01 Wine grape mitochondrion 74.51 26.76
VIT_13s0019g03640.t01 Wine grape mitochondrion 74.51 26.76
Bra028856.1-P Field mustard mitochondrion 74.51 26.76
Bra001300.1-P Field mustard mitochondrion 74.51 26.76
CDY37167 Canola mitochondrion 54.9 26.42
HORVU1Hr1G071570.3 Barley mitochondrion 74.51 26.39
Bra022086.1-P Field mustard cytosol 54.9 24.35
VIT_06s0004g03410.t01 Wine grape cytosol 74.51 23.31
Bra003985.1-P Field mustard mitochondrion 62.75 22.54
CDY70106 Canola mitochondrion 62.75 22.22
CDY62061 Canola mitochondrion 62.75 22.22
KRH55344 Soybean cytosol 62.75 22.07
CDY10413 Canola mitochondrion 74.51 20.88
CDX84175 Canola cytosol 33.33 19.54
CDY01752 Canola vacuole 70.59 18.56
CDY43631 Canola cytosol 33.33 16.83
Zm00001d044342_P002 Maize cytosol, mitochondrion 76.47 16.53
CDY22194 Canola endoplasmic reticulum 74.51 16.24
CDY41304 Canola endoplasmic reticulum 74.51 16.24
Zm00001d018970_P001 Maize cytosol 76.47 15.41
Solyc06g005110.2.1 Tomato mitochondrion, nucleus 19.61 15.38
Bra034077.1-P Field mustard endoplasmic reticulum 74.51 14.73
Zm00001d036211_P001 Maize endoplasmic reticulum 27.45 12.73
Zm00001d048114_P001 Maize cytosol 72.55 7.23
HORVU6Hr1G043260.1 Barley mitochondrion 9.8 5.68
CDY72261 Canola mitochondrion 3.92 3.7
Os10t0350001-00 Rice cytosol, extracellular 0.0 0.0
Protein Annotations
Gene3D:2.40.50.140MapMan:35.1UniProt:A0A1D6JSB4GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:NA-bd_OB-fold
ProteinID:ONL94805.1PFAM:PF00164PANTHER:PTHR11652PANTHER:PTHR11652:SF14InterPro:Ribosomal_S12/S23SUPFAM:SSF50249
UniParc:UPI000845377DEnsemblPlantsGene:Zm00001d028137EnsemblPlants:Zm00001d028137_P001EnsemblPlants:Zm00001d028137_T001::
Description
40S ribosomal protein S23-2
Coordinates
chr1:-:23889397..23890397
Molecular Weight (calculated)
5791.1 Da
IEP (calculated)
8.903
GRAVY (calculated)
-0.386
Length
51 amino acids
Sequence
(BLAST)
1: MCDIEAKQPN STIRKCTRVQ LVKNGKKIAA FVPNDGCLNY IEENVSSYRM L
Best Arabidopsis Sequence Match ( AT5G02960.1 )
(BLAST)
001: MGKTRGMGAG RKLKRLRINQ RWADKQYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Arabidopsis Description
RPS23B40S ribosomal protein S23-2 [Source:UniProtKB/Swiss-Prot;Acc:P49201]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.