Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g005110.2.1 | Tomato | mitochondrion, nucleus | 47.73 | 64.62 |
| KRG89057 | Soybean | mitochondrion | 54.55 | 39.02 |
| CDY71254 | Canola | plastid | 54.55 | 37.8 |
| HORVU1Hr1G071570.3 | Barley | mitochondrion | 61.36 | 37.5 |
| Zm00001d010566_P001 | Maize | plasma membrane | 60.23 | 37.32 |
| EES19663 | Sorghum | mitochondrion | 60.23 | 37.32 |
| VIT_08s0040g02420.t01 | Wine grape | mitochondrion | 56.82 | 35.21 |
| Solyc10g086020.1.1 | Tomato | plastid | 56.82 | 35.21 |
| Solyc10g084310.1.1 | Tomato | mitochondrion | 56.82 | 35.21 |
| Solyc09g007350.2.1 | Tomato | mitochondrion | 56.82 | 35.21 |
| PGSC0003DMT400065339 | Potato | mitochondrion | 56.82 | 35.21 |
| PGSC0003DMT400045338 | Potato | extracellular | 56.82 | 35.21 |
| PGSC0003DMT400027147 | Potato | mitochondrion | 56.82 | 35.21 |
| PGSC0003DMT400004414 | Potato | mitochondrion | 56.82 | 35.21 |
| AT5G02960.1 | Thale cress | mitochondrion | 55.68 | 34.51 |
| VIT_13s0019g03640.t01 | Wine grape | mitochondrion | 55.68 | 34.51 |
| HORVU5Hr1G112390.2 | Barley | mitochondrion | 60.23 | 34.19 |
| Bra001300.1-P | Field mustard | mitochondrion | 54.55 | 33.8 |
| Bra028856.1-P | Field mustard | mitochondrion | 54.55 | 33.8 |
| KRH67642 | Soybean | mitochondrion | 54.55 | 33.8 |
| KRH32405 | Soybean | nucleus | 54.55 | 33.8 |
| KRG95930 | Soybean | mitochondrion | 54.55 | 33.8 |
| KRH19812 | Soybean | nucleus | 53.41 | 33.1 |
| CDY11236 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| Bra009557.1-P | Field mustard | cytosol, mitochondrion | 51.14 | 33.09 |
| CDX70336 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| CDX73991 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| CDX80847 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| CDY07936 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| CDY55693 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| CDY04874 | Canola | cytosol, mitochondrion | 51.14 | 33.09 |
| Bra005745.1-P | Field mustard | cytosol, mitochondrion | 50.0 | 32.35 |
| CDY72262 | Canola | cytosol | 17.05 | 31.91 |
| AT3G09680.1 | Thale cress | mitochondrion | 51.14 | 31.69 |
| KRH24942 | Soybean | cytosol | 45.45 | 31.25 |
| Bra003985.1-P | Field mustard | mitochondrion | 48.86 | 30.28 |
| VIT_06s0004g03410.t01 | Wine grape | cytosol | 55.68 | 30.06 |
| CDY62061 | Canola | mitochondrion | 48.86 | 29.86 |
| HORVU3Hr1G087380.1 | Barley | mitochondrion, plastid | 60.23 | 28.19 |
| CDY70106 | Canola | mitochondrion | 45.45 | 27.78 |
| CDY10413 | Canola | mitochondrion | 54.55 | 26.37 |
| KRH55344 | Soybean | cytosol | 43.18 | 26.21 |
| Solyc11g013160.1.1 | Tomato | cytosol | 15.91 | 22.95 |
| CDY01752 | Canola | vacuole | 45.45 | 20.62 |
| CDY41304 | Canola | endoplasmic reticulum | 54.55 | 20.51 |
| CDY22194 | Canola | endoplasmic reticulum | 54.55 | 20.51 |
| Bra034077.1-P | Field mustard | endoplasmic reticulum | 54.55 | 18.6 |
| CDX84175 | Canola | cytosol | 15.91 | 16.09 |
| CDY43631 | Canola | cytosol | 18.18 | 15.84 |
| Bra022086.1-P | Field mustard | cytosol | 20.45 | 15.65 |
| CDY37167 | Canola | mitochondrion | 18.18 | 15.09 |
| Zm00001d028137_P001 | Maize | cytosol | 5.68 | 9.8 |
| Zm00001d018970_P001 | Maize | cytosol | 19.32 | 6.72 |
| Zm00001d048114_P001 | Maize | cytosol | 37.5 | 6.45 |
| Solyc06g011510.1.1 | Tomato | cytosol | 1.14 | 2.0 |
| CDY72261 | Canola | mitochondrion | 1.14 | 1.85 |
| Os10t0350001-00 | Rice | cytosol, extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G043260.1 | EnsemblPlantsGene:HORVU6Hr1G043260 | Gene3D:2.40.50.140 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:Ribosomal_S12/S23 |
| PANTHER:PTHR11652 | PANTHER:PTHR11652:SF37 | UniParc:UPI000B47C12C | UniProt:A0A287U240 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr6H:+:245249094..245249552
Molecular Weight (calculated)
9894.1 Da
IEP (calculated)
11.873
GRAVY (calculated)
-0.825
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: HMQTRGMGAG RKLKTHRRNQ RWADKAYKKS HLGNEWKKPF AGSSHAKGIV LEKMPWSSPA TLRGTTRRPV LCPATSSSTC TMIQRCIS
001: MGKTRGMGAG RKLKRLRINQ RWADKQYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Arabidopsis Description
RPS23B40S ribosomal protein S23-2 [Source:UniProtKB/Swiss-Prot;Acc:P49201]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.