CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g005110.2.1	Tomato	mitochondrion, nucleus	41.73	81.54
CDY72262	Canola	cytosol	28.35	76.6
Zm00001d028137_P001	Maize	cytosol	28.35	70.59
GSMUA_Achr4P17160_001	Banana	cytosol, mitochondrion	62.2	69.3
KRG89057	Soybean	mitochondrion	66.14	68.29
CDX70336	Canola	cytosol, mitochondrion	69.29	64.71
CDX73991	Canola	cytosol, mitochondrion	69.29	64.71
CDX80847	Canola	cytosol, mitochondrion	69.29	64.71
CDY04874	Canola	cytosol, mitochondrion	69.29	64.71
CDY07936	Canola	cytosol, mitochondrion	69.29	64.71
CDY11236	Canola	cytosol, mitochondrion	69.29	64.71
CDY55693	Canola	cytosol, mitochondrion	69.29	64.71
PGSC0003DMT400065339	Potato	mitochondrion	69.29	61.97
Zm00001d010566_P001	Maize	plasma membrane	69.29	61.97
VIT_13s0019g03640.t01	Wine grape	mitochondrion	69.29	61.97
PGSC0003DMT400004414	Potato	mitochondrion	69.29	61.97
PGSC0003DMT400027147	Potato	mitochondrion	69.29	61.97
PGSC0003DMT400045338	Potato	extracellular	69.29	61.97
AT3G09680.1	Thale cress	mitochondrion	69.29	61.97
Solyc09g007350.2.1	Tomato	mitochondrion	69.29	61.97
Solyc10g084310.1.1	Tomato	mitochondrion	69.29	61.97
Solyc10g086020.1.1	Tomato	plastid	69.29	61.97
EES03842	Sorghum	mitochondrion	69.29	61.97
EES19663	Sorghum	mitochondrion	69.29	61.97
EER90632	Sorghum	mitochondrion	69.29	61.97
Zm00001d042966_P001	Maize	mitochondrion	69.29	61.97
Zm00001d034628_P001	Maize	mitochondrion	69.29	61.97
VIT_08s0040g02420.t01	Wine grape	mitochondrion	68.5	61.27
Os03t0818400-01	Rice	nucleus	68.5	61.27
Os01t0834500-01	Rice	mitochondrion	68.5	61.27
KRG95930	Soybean	mitochondrion	67.72	60.56
KRH32405	Soybean	nucleus	67.72	60.56
KRH67642	Soybean	mitochondrion	67.72	60.56
Zm00001d012978_P001	Maize	extracellular	64.57	60.29
Zm00001d036211_P001	Maize	endoplasmic reticulum	51.97	60.0
KRH19812	Soybean	nucleus	66.93	59.86
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	63.78	59.56
HORVU1Hr1G071570.3	Barley	mitochondrion	66.93	59.03
Solyc11g013160.1.1	Tomato	cytosol	28.35	59.02
HORVU5Hr1G112390.2	Barley	mitochondrion	67.72	55.48
KRH24942	Soybean	cytosol	55.12	54.69
VIT_06s0004g03410.t01	Wine grape	cytosol	70.08	54.6
HORVU6Hr1G043260.1	Barley	mitochondrion	37.8	54.55
CDY10413	Canola	mitochondrion	77.17	53.85
KRH55344	Soybean	cytosol	59.06	51.72
CDY62061	Canola	mitochondrion	58.27	51.39
CDY41304	Canola	endoplasmic reticulum	92.13	50.0
CDY22194	Canola	endoplasmic reticulum	92.13	50.0
CDY70106	Canola	mitochondrion	55.91	49.31
GSMUA_Achr3P01170_001	Banana	mitochondrion, plastid	68.5	48.6
HORVU3Hr1G087380.1	Barley	mitochondrion, plastid	71.65	48.4
GSMUA_Achr2P23030_001	Banana	mitochondrion	70.08	48.37
GSMUA_Achr5P14800_001	Banana	cytosol, mitochondrion	68.5	48.07
Os10t0350450-00	Rice	mitochondrion	69.29	47.31
Bra034077.1-P	Field mustard	endoplasmic reticulum	91.34	44.96
GSMUA_Achr2P22920_001	Banana	mitochondrion	59.84	43.93
CDY37167	Canola	mitochondrion	34.65	41.51
CDY01752	Canola	vacuole	59.06	38.66
CDX84175	Canola	cytosol	23.62	34.48
Solyc06g011510.1.1	Tomato	cytosol	13.39	34.0
Zm00001d044342_P002	Maize	cytosol, mitochondrion	59.06	31.78
CDY43631	Canola	cytosol	24.41	30.69
Zm00001d018970_P001	Maize	cytosol	42.52	21.34
Zm00001d048114_P001	Maize	cytosol	55.12	13.67
CDY72261	Canola	mitochondrion	0.79	1.85
Os10t0350001-00	Rice	cytosol, extracellular	0.0	0.0

Protein Annotations

MapMan:17.1.3.1.24	Gene3D:2.40.50.140	GO:A0A078JX24	UniProt:A0A078JX24	EnsemblPlants:CDY71254	ProteinID:CDY71254
ProteinID:CDY71254.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00013676001	InterPro:NA-bd_OB-fold
PFAM:PF00164	PIRSF:PIRSF002133	ScanProsite:PS00055	PANTHER:PTHR11652	PANTHER:PTHR11652:SF37	InterPro:Ribosomal_S12/S23
SUPFAM:SSF50249	UniParc:UPI0004EE01A9	:	:	:	:

Description

BnaAnng36700DBnaAnng36700D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JX24]

Coordinates

chrLK045118:-:3..919

Molecular Weight (calculated)

14141.5 Da

IEP (calculated)

11.098

GRAVY (calculated)

-0.313

Length

127 amino acids

Sequence
(BLAST)

001: MFLLSLVVSL SGTQRSNLSQ LQLLCSVYLA VVNMGKTRGM GAGRKLKRLR INQRWADKQY KKSHQGNEWK KPFAGSSHAK GIVLEKIGIE AKQPNSAIRK
101: CARVQLIKNG KKIAAFVPND GCLNYIE

Best Arabidopsis Sequence Match ( AT3G09680.1 )
(BLAST)

001: MGKTRGMGAG RKLKQLRITQ RWADKHYKKS NRGNEWKKPF ACSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS

Arabidopsis Description

RPS23A40S ribosomal protein S23-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF35]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.