Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0350001-00 | Rice | cytosol, extracellular | 55.56 | 66.67 |
| CDY43631 | Canola | cytosol | 100.0 | 53.47 |
| CDX84175 | Canola | cytosol | 77.78 | 48.28 |
| CDY37167 | Canola | mitochondrion | 72.22 | 36.79 |
| Bra022086.1-P | Field mustard | cytosol | 77.78 | 36.52 |
| KRH24942 | Soybean | cytosol | 66.67 | 28.12 |
| Solyc06g011510.1.1 | Tomato | cytosol | 25.93 | 28.0 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 68.52 | 27.21 |
| CDY70106 | Canola | mitochondrion | 72.22 | 27.08 |
| CDY62061 | Canola | mitochondrion | 72.22 | 27.08 |
| CDY11236 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| CDX70336 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| CDX73991 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| CDX80847 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| Zm00001d012978_P001 | Maize | extracellular | 66.67 | 26.47 |
| CDY04874 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| CDY55693 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| CDY07936 | Canola | cytosol, mitochondrion | 66.67 | 26.47 |
| Os03t0818400-01 | Rice | nucleus | 68.52 | 26.06 |
| Os01t0834500-01 | Rice | mitochondrion | 68.52 | 26.06 |
| HORVU1Hr1G071570.3 | Barley | mitochondrion | 68.52 | 25.69 |
| Solyc10g086020.1.1 | Tomato | plastid | 66.67 | 25.35 |
| KRG95930 | Soybean | mitochondrion | 66.67 | 25.35 |
| KRH19812 | Soybean | nucleus | 66.67 | 25.35 |
| PGSC0003DMT400065339 | Potato | mitochondrion | 66.67 | 25.35 |
| KRH32405 | Soybean | nucleus | 66.67 | 25.35 |
| KRH67642 | Soybean | mitochondrion | 66.67 | 25.35 |
| Solyc09g007350.2.1 | Tomato | mitochondrion | 66.67 | 25.35 |
| PGSC0003DMT400004414 | Potato | mitochondrion | 66.67 | 25.35 |
| PGSC0003DMT400027147 | Potato | mitochondrion | 66.67 | 25.35 |
| PGSC0003DMT400045338 | Potato | extracellular | 66.67 | 25.35 |
| Solyc10g084310.1.1 | Tomato | mitochondrion | 66.67 | 25.35 |
| VIT_08s0040g02420.t01 | Wine grape | mitochondrion | 66.67 | 25.35 |
| Zm00001d042966_P001 | Maize | mitochondrion | 66.67 | 25.35 |
| Zm00001d034628_P001 | Maize | mitochondrion | 66.67 | 25.35 |
| VIT_13s0019g03640.t01 | Wine grape | mitochondrion | 66.67 | 25.35 |
| Zm00001d010566_P001 | Maize | plasma membrane | 66.67 | 25.35 |
| EER90632 | Sorghum | mitochondrion | 66.67 | 25.35 |
| EES03842 | Sorghum | mitochondrion | 66.67 | 25.35 |
| EES19663 | Sorghum | mitochondrion | 66.67 | 25.35 |
| HORVU5Hr1G112390.2 | Barley | mitochondrion | 68.52 | 23.87 |
| VIT_06s0004g03410.t01 | Wine grape | cytosol | 66.67 | 22.09 |
| GSMUA_Achr3P01170_001 | Banana | mitochondrion, plastid | 68.52 | 20.67 |
| GSMUA_Achr5P14800_001 | Banana | cytosol, mitochondrion | 68.52 | 20.44 |
| GSMUA_Achr2P23030_001 | Banana | mitochondrion | 68.52 | 20.11 |
| CDY01752 | Canola | vacuole | 72.22 | 20.1 |
| CDY10413 | Canola | mitochondrion | 66.67 | 19.78 |
| HORVU3Hr1G087380.1 | Barley | mitochondrion, plastid | 68.52 | 19.68 |
| GSMUA_Achr2P22920_001 | Banana | mitochondrion | 61.11 | 19.08 |
| Solyc11g013160.1.1 | Tomato | cytosol | 18.52 | 16.39 |
| KRG89057 | Soybean | mitochondrion | 37.04 | 16.26 |
| CDY41304 | Canola | endoplasmic reticulum | 66.67 | 15.38 |
| CDY22194 | Canola | endoplasmic reticulum | 66.67 | 15.38 |
| Zm00001d048114_P001 | Maize | cytosol | 48.15 | 5.08 |
| GSMUA_Achr4P17160_001 | Banana | cytosol, mitochondrion | 9.26 | 4.39 |
| Zm00001d018970_P001 | Maize | cytosol | 20.37 | 4.35 |
| Zm00001d028137_P001 | Maize | cytosol | 3.7 | 3.92 |
| Zm00001d044342_P002 | Maize | cytosol, mitochondrion | 11.11 | 2.54 |
| CDY72262 | Canola | cytosol | 1.85 | 2.13 |
| Os10t0350450-00 | Rice | mitochondrion | 5.56 | 1.61 |
| HORVU6Hr1G043260.1 | Barley | mitochondrion | 1.85 | 1.14 |
| CDY71254 | Canola | plastid | 1.85 | 0.79 |
| Solyc06g005110.2.1 | Tomato | mitochondrion, nucleus | 0.0 | 0.0 |
| KRH55344 | Soybean | cytosol | 0.0 | 0.0 |
| Zm00001d036211_P001 | Maize | endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.50.140 | MapMan:35.2 | GO:A0A078K3B9 | UniProt:A0A078K3B9 | EnsemblPlants:CDY72261 | ProteinID:CDY72261 |
| ProteinID:CDY72261.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00026001001 | InterPro:NA-bd_OB-fold | PFAM:PF00164 |
| PANTHER:PTHR11652 | PANTHER:PTHR11652:SF37 | InterPro:Ribosomal_S12/S23 | SUPFAM:SSF50249 | UniParc:UPI0004EE0EC9 | : |
Description
BnaAnng40440DBnaAnng40440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K3B9]
Coordinates
chrLK049773:-:1672..1836
Molecular Weight (calculated)
5870.4 Da
IEP (calculated)
10.960
GRAVY (calculated)
0.065
Length
54 amino acids
Sequence
(BLAST)
(BLAST)
1: MFCVMLFAGR GLISGFGRKS HAVGDIPGVR YKAVKVSGVL LSALYKDKKE KPRS
001: MGKTRGMGAG RKLKQLRITQ RWADKHYKKS NRGNEWKKPF ACSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Arabidopsis Description
RPS23A40S ribosomal protein S23-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF35]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.