Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012978_P001 | Maize | extracellular | 87.1 | 99.26 |
| Os03t0818400-01 | Rice | nucleus | 90.32 | 98.59 |
| EER90632 | Sorghum | mitochondrion | 89.68 | 97.89 |
| Zm00001d034628_P001 | Maize | mitochondrion | 89.68 | 97.89 |
| HORVU1Hr1G071570.3 | Barley | mitochondrion | 90.32 | 97.22 |
| VIT_08s0040g02420.t01 | Wine grape | mitochondrion | 87.1 | 95.07 |
| Solyc10g086020.1.1 | Tomato | plastid | 87.1 | 95.07 |
| Solyc10g084310.1.1 | Tomato | mitochondrion | 87.1 | 95.07 |
| Solyc09g007350.2.1 | Tomato | mitochondrion | 87.1 | 95.07 |
| PGSC0003DMT400065339 | Potato | mitochondrion | 87.1 | 95.07 |
| PGSC0003DMT400045338 | Potato | extracellular | 87.1 | 95.07 |
| PGSC0003DMT400027147 | Potato | mitochondrion | 87.1 | 95.07 |
| PGSC0003DMT400004414 | Potato | mitochondrion | 87.1 | 95.07 |
| Bra009557.1-P | Field mustard | cytosol, mitochondrion | 83.23 | 94.85 |
| CDY55693 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDY11236 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDY07936 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDX70336 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDX73991 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDX80847 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| CDY04874 | Canola | cytosol, mitochondrion | 83.23 | 94.85 |
| AT5G02960.1 | Thale cress | mitochondrion | 86.45 | 94.37 |
| VIT_13s0019g03640.t01 | Wine grape | mitochondrion | 86.45 | 94.37 |
| Bra005745.1-P | Field mustard | cytosol, mitochondrion | 82.58 | 94.12 |
| Bra028856.1-P | Field mustard | mitochondrion | 85.81 | 93.66 |
| KRH67642 | Soybean | mitochondrion | 85.81 | 93.66 |
| KRH32405 | Soybean | nucleus | 85.81 | 93.66 |
| KRG95930 | Soybean | mitochondrion | 85.81 | 93.66 |
| Bra001300.1-P | Field mustard | mitochondrion | 85.81 | 93.66 |
| KRH19812 | Soybean | nucleus | 85.16 | 92.96 |
| KRH24942 | Soybean | cytosol | 76.13 | 92.19 |
| AT3G09680.1 | Thale cress | mitochondrion | 83.87 | 91.55 |
| KRG89057 | Soybean | mitochondrion | 71.61 | 90.24 |
| Solyc11g013160.1.1 | Tomato | cytosol | 33.55 | 85.25 |
| VIT_06s0004g03410.t01 | Wine grape | cytosol | 87.1 | 82.82 |
| Bra003985.1-P | Field mustard | mitochondrion | 75.48 | 82.39 |
| Solyc06g005110.2.1 | Tomato | mitochondrion, nucleus | 34.19 | 81.54 |
| CDY62061 | Canola | mitochondrion | 75.48 | 81.25 |
| CDY72262 | Canola | cytosol | 24.52 | 80.85 |
| CDY70106 | Canola | mitochondrion | 73.55 | 79.17 |
| GSMUA_Achr4P17160_001 | Banana | cytosol, mitochondrion | 57.42 | 78.07 |
| CDX84175 | Canola | cytosol | 42.58 | 75.86 |
| HORVU3Hr1G087380.1 | Barley | mitochondrion, plastid | 90.32 | 74.47 |
| CDY10413 | Canola | mitochondrion | 87.1 | 74.18 |
| CDY37167 | Canola | mitochondrion | 50.32 | 73.58 |
| Bra022086.1-P | Field mustard | cytosol | 52.26 | 70.43 |
| Solyc06g011510.1.1 | Tomato | cytosol | 22.58 | 70.0 |
| CDY72261 | Canola | mitochondrion | 23.87 | 68.52 |
| CDY71254 | Canola | plastid | 55.48 | 67.72 |
| CDY43631 | Canola | cytosol | 43.87 | 67.33 |
| HORVU6Hr1G043260.1 | Barley | mitochondrion | 34.19 | 60.23 |
| CDY01752 | Canola | vacuole | 74.84 | 59.79 |
| CDY41304 | Canola | endoplasmic reticulum | 86.45 | 57.27 |
| CDY22194 | Canola | endoplasmic reticulum | 86.45 | 57.27 |
| Bra034077.1-P | Field mustard | endoplasmic reticulum | 86.45 | 51.94 |
| KRH55344 | Soybean | cytosol | 47.1 | 50.34 |
Protein Annotations
| MapMan:17.1.3.1.24 | Gene3D:2.40.50.140 | UniProt:A0A287SRM1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015935 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU5Hr1G112390 | EnsemblPlants:HORVU5Hr1G112390.2 | InterPro:NA-bd_OB-fold | PFAM:PF00164 | PIRSF:PIRSF002133 | ScanProsite:PS00055 |
| PANTHER:PTHR11652 | PANTHER:PTHR11652:SF37 | InterPro:Ribosomal_S12/S23 | InterPro:Ribosomal_S23_euk/arc | SUPFAM:SSF50249 | SignalP:SignalP-noTM |
| TIGRFAMs:TIGR00982 | UniParc:UPI000B46C9CC | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:639097040..639098085
Molecular Weight (calculated)
17255.2 Da
IEP (calculated)
11.112
GRAVY (calculated)
-0.389
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: NSALLLSFVQ WIFVYKTRGM GAGRKLKTHR RNQRWADKAY KKSHLGNEWK KPFAGSSHAK GIVLEKIGIE AKQPNSAIRK CARVQLVKNG KKIAAFVPND
101: GCLNFIEEND EVLIAGFGRK GHAVGDIPGV RFKVVKVSGV SLLALFKEKK EKPRS
101: GCLNFIEEND EVLIAGFGRK GHAVGDIPGV RFKVVKVSGV SLLALFKEKK EKPRS
001: MGKTRGMGAG RKLKQLRITQ RWADKHYKKS NRGNEWKKPF ACSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Arabidopsis Description
RPS23A40S ribosomal protein S23-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF35]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.