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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84175 Canola cytosol 76.42 93.1
Bra022086.1-P Field mustard cytosol 91.51 84.35
CDY43631 Canola cytosol 76.42 80.2
CDY72262 Canola cytosol 33.02 74.47
CDY72261 Canola mitochondrion 36.79 72.22
Os10t0350001-00 Rice cytosol, extracellular 26.42 62.22
Zm00001d012978_P001 Maize extracellular 73.58 57.35
CDX70336 Canola cytosol, mitochondrion 72.64 56.62
GSMUA_Achr10P... Banana cytosol, mitochondrion 72.64 56.62
CDY55693 Canola cytosol, mitochondrion 72.64 56.62
CDY11236 Canola cytosol, mitochondrion 72.64 56.62
CDX73991 Canola cytosol, mitochondrion 72.64 56.62
CDY07936 Canola cytosol, mitochondrion 72.64 56.62
CDX80847 Canola cytosol, mitochondrion 72.64 56.62
CDY04874 Canola cytosol, mitochondrion 72.64 56.62
EER90632 Sorghum mitochondrion 73.58 54.93
EES19663 Sorghum mitochondrion 73.58 54.93
EES03842 Sorghum mitochondrion 73.58 54.93
Zm00001d042966_P001 Maize mitochondrion 73.58 54.93
Zm00001d010566_P001 Maize plasma membrane 73.58 54.93
Os01t0834500-01 Rice mitochondrion 73.58 54.93
Os03t0818400-01 Rice nucleus 73.58 54.93
Zm00001d034628_P001 Maize mitochondrion 73.58 54.93
Zm00001d028137_P001 Maize cytosol 26.42 54.9
Solyc10g084310.1.1 Tomato mitochondrion 72.64 54.23
PGSC0003DMT400004414 Potato mitochondrion 72.64 54.23
PGSC0003DMT400027147 Potato mitochondrion 72.64 54.23
PGSC0003DMT400045338 Potato extracellular 72.64 54.23
PGSC0003DMT400065339 Potato mitochondrion 72.64 54.23
Solyc09g007350.2.1 Tomato mitochondrion 72.64 54.23
Solyc10g086020.1.1 Tomato plastid 72.64 54.23
VIT_08s0040g02420.t01 Wine grape mitochondrion 72.64 54.23
VIT_13s0019g03640.t01 Wine grape mitochondrion 72.64 54.23
HORVU1Hr1G071570.3 Barley mitochondrion 73.58 54.17
CDY70106 Canola mitochondrion 73.58 54.17
CDY62061 Canola mitochondrion 73.58 54.17
KRH24942 Soybean cytosol 65.09 53.91
KRG95930 Soybean mitochondrion 71.7 53.52
KRH19812 Soybean nucleus 71.7 53.52
KRH32405 Soybean nucleus 71.7 53.52
KRH67642 Soybean mitochondrion 71.7 53.52
KRG89057 Soybean mitochondrion 58.49 50.41
HORVU5Hr1G112390.2 Barley mitochondrion 73.58 50.32
Solyc11g013160.1.1 Tomato cytosol 28.3 49.18
VIT_06s0004g03410.t01 Wine grape cytosol 72.64 47.24
GSMUA_Achr3P01170_001 Banana mitochondrion, plastid 72.64 43.02
GSMUA_Achr5P14800_001 Banana cytosol, mitochondrion 72.64 42.54
CDY10413 Canola mitochondrion 72.64 42.31
CDY01752 Canola vacuole 77.36 42.27
Solyc06g011510.1.1 Tomato cytosol 19.81 42.0
GSMUA_Achr2P23030_001 Banana mitochondrion 72.64 41.85
HORVU3Hr1G087380.1 Barley mitochondrion, plastid 73.58 41.49
GSMUA_Achr4P17160_001 Banana cytosol, mitochondrion 43.4 40.35
GSMUA_Achr2P22920_001 Banana mitochondrion 60.38 36.99
CDY71254 Canola plastid 41.51 34.65
CDY41304 Canola endoplasmic reticulum 72.64 32.91
CDY22194 Canola endoplasmic reticulum 72.64 32.91
Solyc06g005110.2.1 Tomato mitochondrion, nucleus 18.87 30.77
KRH55344 Soybean cytosol 36.79 26.9
Zm00001d036211_P001 Maize endoplasmic reticulum 27.36 26.36
Os10t0350450-00 Rice mitochondrion 44.34 25.27
Zm00001d044342_P002 Maize cytosol, mitochondrion 43.4 19.49
HORVU6Hr1G043260.1 Barley mitochondrion 15.09 18.18
Zm00001d018970_P001 Maize cytosol 39.62 16.6
Zm00001d048114_P001 Maize cytosol 62.26 12.89
Protein Annotations
MapMan:17.1.3.1.24Gene3D:2.40.50.140GO:A0A078HH19UniProt:A0A078HH19EnsemblPlants:CDY37167ProteinID:CDY37167
ProteinID:CDY37167.1GO:GO:0003674GO:GO:0003735GO:GO:0005198GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0019538GO:GO:0030529EnsemblPlantsGene:GSBRNA2T00063432001InterPro:NA-bd_OB-fold
PFAM:PF00164PIRSF:PIRSF002133PANTHER:PTHR11652PANTHER:PTHR11652:SF37InterPro:Ribosomal_S12/S23SUPFAM:SSF50249
UniParc:UPI0004EDB98F:::::
Description
BnaA02g24860DBnaA02g24860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HH19]
Coordinates
chrLK032393:+:232954..233535
Molecular Weight (calculated)
11274.1 Da
IEP (calculated)
10.704
GRAVY (calculated)
-0.150
Length
106 amino acids
Sequence
(BLAST)
001: MGSACFQKKY KPLAGASHAK GIVLELIGME AKQPCSGICK CARVQLVKNG KKVAAFVPND GRGLISGFGR KSHTVGDIPG VRYKVVKVSG VLLSALYKDK
101: KEKPKS
Best Arabidopsis Sequence Match ( AT5G02960.1 )
(BLAST)
001: MGKTRGMGAG RKLKRLRINQ RWADKQYKKS HLGNEWKKPF AGSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Arabidopsis Description
RPS23B40S ribosomal protein S23-2 [Source:UniProtKB/Swiss-Prot;Acc:P49201]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.