CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62061	Canola	mitochondrion	95.83	95.83
Bra003985.1-P	Field mustard	mitochondrion	94.44	95.77
KRH19812	Soybean	nucleus	81.25	82.39
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	77.78	82.35
KRH32405	Soybean	nucleus	80.56	81.69
KRG95930	Soybean	mitochondrion	80.56	81.69
KRH67642	Soybean	mitochondrion	80.56	81.69
Zm00001d012978_P001	Maize	extracellular	77.08	81.62
PGSC0003DMT400004414	Potato	mitochondrion	79.86	80.99
PGSC0003DMT400027147	Potato	mitochondrion	79.86	80.99
PGSC0003DMT400045338	Potato	extracellular	79.86	80.99
PGSC0003DMT400065339	Potato	mitochondrion	79.86	80.99
Solyc09g007350.2.1	Tomato	mitochondrion	79.86	80.99
Solyc10g086020.1.1	Tomato	plastid	79.86	80.99
Solyc10g084310.1.1	Tomato	mitochondrion	79.86	80.99
CDX70336	Canola	cytosol, mitochondrion	76.39	80.88
CDY07936	Canola	cytosol, mitochondrion	76.39	80.88
CDX73991	Canola	cytosol, mitochondrion	76.39	80.88
CDX80847	Canola	cytosol, mitochondrion	76.39	80.88
CDY04874	Canola	cytosol, mitochondrion	76.39	80.88
CDY11236	Canola	cytosol, mitochondrion	76.39	80.88
CDY55693	Canola	cytosol, mitochondrion	76.39	80.88
CDY72262	Canola	cytosol	26.39	80.85
KRH24942	Soybean	cytosol	71.53	80.47
EES19663	Sorghum	mitochondrion	79.17	80.28
Zm00001d010566_P001	Maize	plasma membrane	79.17	80.28
EES03842	Sorghum	mitochondrion	79.17	80.28
EER90632	Sorghum	mitochondrion	79.17	80.28
Os03t0818400-01	Rice	nucleus	79.17	80.28
Os01t0834500-01	Rice	mitochondrion	79.17	80.28
Zm00001d034628_P001	Maize	mitochondrion	79.17	80.28
Zm00001d042966_P001	Maize	mitochondrion	79.17	80.28
Os10t0350001-00	Rice	cytosol, extracellular	25.0	80.0
HORVU1Hr1G071570.3	Barley	mitochondrion	79.86	79.86
VIT_08s0040g02420.t01	Wine grape	mitochondrion	78.47	79.58
VIT_13s0019g03640.t01	Wine grape	mitochondrion	78.47	79.58
KRG89057	Soybean	mitochondrion	66.67	78.05
Solyc11g013160.1.1	Tomato	cytosol	32.64	77.05
CDX84175	Canola	cytosol	46.53	77.01
CDY37167	Canola	mitochondrion	54.17	73.58
HORVU5Hr1G112390.2	Barley	mitochondrion	79.17	73.55
CDY72261	Canola	mitochondrion	27.08	72.22
VIT_06s0004g03410.t01	Wine grape	cytosol	79.17	69.94
Solyc06g005110.2.1	Tomato	mitochondrion, nucleus	30.56	67.69
CDY43631	Canola	cytosol	46.53	66.34
CDY01752	Canola	vacuole	86.81	64.43
GSMUA_Achr3P01170_001	Banana	mitochondrion, plastid	79.86	64.25
GSMUA_Achr4P17160_001	Banana	cytosol, mitochondrion	50.69	64.04
Solyc06g011510.1.1	Tomato	cytosol	22.22	64.0
GSMUA_Achr5P14800_001	Banana	cytosol, mitochondrion	79.86	63.54
Zm00001d028137_P001	Maize	cytosol	22.22	62.75
GSMUA_Achr2P23030_001	Banana	mitochondrion	79.86	62.5
CDY10413	Canola	mitochondrion	78.47	62.09
HORVU3Hr1G087380.1	Barley	mitochondrion, plastid	79.17	60.64
GSMUA_Achr2P22920_001	Banana	mitochondrion	70.14	58.38
CDY71254	Canola	plastid	49.31	55.91
Zm00001d036211_P001	Maize	endoplasmic reticulum	37.5	49.09
CDY41304	Canola	endoplasmic reticulum	78.47	48.29
CDY22194	Canola	endoplasmic reticulum	78.47	48.29
HORVU6Hr1G043260.1	Barley	mitochondrion	27.78	45.45
KRH55344	Soybean	cytosol	42.36	42.07
Os10t0350450-00	Rice	mitochondrion	50.0	38.71
Zm00001d044342_P002	Maize	cytosol, mitochondrion	48.61	29.66
Zm00001d018970_P001	Maize	cytosol	39.58	22.53
Zm00001d048114_P001	Maize	cytosol	62.5	17.58

Protein Annotations

MapMan:17.1.3.1.24	Gene3D:2.40.50.140	GO:A0A078JX70	UniProt:A0A078JX70	EnsemblPlants:CDY70106	ProteinID:CDY70106
ProteinID:CDY70106.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015935	GO:GO:0019538	GO:GO:0030529	EnsemblPlantsGene:GSBRNA2T00096519001
InterPro:NA-bd_OB-fold	PFAM:PF00164	PIRSF:PIRSF002133	ScanProsite:PS00055	PANTHER:PTHR11652	PANTHER:PTHR11652:SF37
InterPro:Ribosomal_S12/S23	InterPro:Ribosomal_S23_euk/arc	SUPFAM:SSF50249	TIGRFAMs:TIGR00982	UniParc:UPI0004EE5B13	:

Description

BnaAnng32630DBnaAnng32630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX70]

Coordinates

chrLK041192:-:2285..3331

Molecular Weight (calculated)

15827.4 Da

IEP (calculated)

11.150

GRAVY (calculated)

-0.565

Length

144 amino acids

Sequence
(BLAST)

001: MSYRKTMGIG SARVQKTRRK TQRWSDKSYK KSHLGNEWNK PFAGSSHAKG IVLELIGVEA KQPNSAIRKC ARIQLIKNGK KVVAFVPNDG CLNLLEPNDE
101: VLISGFGRKG HAVGDIPGVR NKVVKVSGVS LSALYKGKKE KPRS

Best Arabidopsis Sequence Match ( AT3G09680.1 )
(BLAST)

001: MGKTRGMGAG RKLKQLRITQ RWADKHYKKS NRGNEWKKPF ACSSHAKGIV LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
101: IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS

Arabidopsis Description

RPS23A40S ribosomal protein S23-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SF35]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.