CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020373.1-P	Field mustard	nucleus	78.12	17.92
CDY43862	Canola	nucleus	64.06	10.22
CDY27805	Canola	nucleus	59.38	9.64
CDY41924	Canola	nucleus	53.12	8.81
CDY32992	Canola	nucleus	59.38	8.76
KRG98140	Soybean	nucleus	32.81	4.49
KRH30478	Soybean	nucleus	32.81	4.48
TraesCS2D01G077000.1	Wheat	nucleus	25.0	4.4
TraesCS2B01G094500.1	Wheat	plastid	25.0	4.23
EER98688	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole	26.56	4.05
TraesCS2A01G079700.1	Wheat	plastid	23.44	3.98
HORVU2Hr1G013090.1	Barley	nucleus	23.44	3.96
Os07t0695900-01	Rice	nucleus	21.88	3.65
Os06t0181300-01	Rice	nucleus	18.75	3.58
Zm00001d045123_P001	Maize	nucleus	21.88	3.47
PGSC0003DMT400078128	Potato	nucleus	23.44	3.23
KRH63009	Soybean	nucleus	21.88	3.2
VIT_06s0004g08050.t01	Wine grape	nucleus	23.44	3.13
TraesCS7B01G047400.1	Wheat	nucleus	20.31	3.12
KRH54884	Soybean	nucleus	23.44	3.04
GSMUA_Achr9P30360_001	Banana	nucleus	14.06	2.9
TraesCS7D01G146500.1	Wheat	nucleus	18.75	2.88
TraesCS7A01G145200.1	Wheat	nucleus	18.75	2.88
OQU93426	Sorghum	cytosol	15.62	2.8
EER93019	Sorghum	nucleus	18.75	2.8
Solyc06g082510.2.1	Tomato	nucleus	20.31	2.78
OQU91491	Sorghum	nucleus	23.44	2.55
KRH41741	Soybean	nucleus	4.69	2.31
EES15771	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole	23.44	2.24
OQU75965	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole	23.44	2.24
GSMUA_Achr4P27790_001	Banana	nucleus	9.38	2.15
Zm00001d007141_P003	Maize	nucleus	14.06	2.05
Zm00001d013827_P001	Maize	extracellular, nucleus	18.75	2.01
Zm00001d036356_P005	Maize	nucleus	12.5	1.84
CDY32708	Canola	nucleus	1.56	1.33

Protein Annotations

EnsemblPlants:CDY32710	EnsemblPlantsGene:GSBRNA2T00052760001	ProteinID:CDY32710	ProteinID:CDY32710.1	UniParc:UPI0004EF3B56	UniProt:A0A078H267
MapMan:35.2	:	:	:	:	:

Description

BnaA02g07720DBnaA02g07720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H267]

Coordinates

chrLK032298:-:296043..296237

Molecular Weight (calculated)

7325.9 Da

IEP (calculated)

9.546

GRAVY (calculated)

-0.431

Length

64 amino acids

Sequence
(BLAST)

1: MEVIDKWVTE FFIRCQHNPR GSPTKLLSAL KFGDSPDCLK LKISSVLRGH LQFFDPRHGR GENA

Best Arabidopsis Sequence Match ( AT5G58340.1 )
(BLAST)

001: MEVIDQWVAE FFLLRQHNPR ASPINLISAL KLGDSSDCIK LKISSVLRDI SNSLIRGTID EGMLDLLEIL EKLLLQQHSL LMDSHKSAYC WTATECTLRF
101: MWPMFASDGL FTDALERIWT KRIGILKESG SDLVTCDLLK WESDLKKALG DPELYQRIRE TNIRYTAISF LTQLLKEQWA LLGSSSLESV AQRRFLKRKA
201: VNVEGDVVDN RGDQSDVDES TRRFGSDTID IANEARGERE DGNGIGRDNA NDGEGMECLE NDGIDNVNAA DEEHTVSAQD QEHEPSLDKG DEMAARELKE
301: YLVEIQGHID PSTRQGEEPN SAIDHSVDVT PPPTRVNRTG TGCQDHNEAS DNVNEKGSDS QETWSSRVRP RRPTPVTLSV SPLKKGGLAK PHVRRPKKFW
401: KPEEVEALRE GVKEYGKSWK DIKNGNPTVF AERTEVDLKD KWRNLVGG

Arabidopsis Description

Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q5XUY3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.