Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002659.1-P | Field mustard | nucleus | 95.16 | 95.38 |
| CDY43862 | Canola | nucleus | 83.41 | 90.27 |
| CDY32708 | Canola | nucleus | 11.98 | 69.33 |
| CDY27805 | Canola | nucleus | 60.6 | 66.75 |
| AT5G58340.1 | Thale cress | nucleus | 66.13 | 64.06 |
| CDY41924 | Canola | nucleus | 56.22 | 63.21 |
| CDY32710 | Canola | cytosol | 8.76 | 59.38 |
| Solyc06g082510.2.1 | Tomato | nucleus | 25.35 | 23.55 |
| VIT_06s0004g08050.t01 | Wine grape | nucleus | 25.58 | 23.17 |
| KRH41741 | Soybean | nucleus | 6.91 | 23.08 |
| KRH63009 | Soybean | nucleus | 23.27 | 23.06 |
| KRH30478 | Soybean | nucleus | 24.65 | 22.81 |
| KRH54884 | Soybean | nucleus | 25.81 | 22.72 |
| EER98688 | Sorghum | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole | 21.66 | 22.38 |
| KRG98140 | Soybean | nucleus | 23.96 | 22.22 |
| PGSC0003DMT400078128 | Potato | nucleus | 23.5 | 21.98 |
| TraesCS2B01G094500.1 | Wheat | plastid | 19.12 | 21.96 |
| TraesCS7B01G047400.1 | Wheat | nucleus | 20.97 | 21.82 |
| TraesCS2D01G077000.1 | Wheat | nucleus | 18.2 | 21.7 |
| TraesCS7A01G145200.1 | Wheat | nucleus | 20.74 | 21.58 |
| TraesCS7D01G146500.1 | Wheat | nucleus | 20.51 | 21.39 |
| TraesCS2A01G079700.1 | Wheat | plastid | 18.43 | 21.22 |
| Zm00001d007141_P003 | Maize | nucleus | 21.43 | 21.18 |
| Os07t0695900-01 | Rice | nucleus | 18.66 | 21.09 |
| OQU93426 | Sorghum | cytosol | 17.28 | 21.01 |
| EER93019 | Sorghum | nucleus | 20.51 | 20.75 |
| Zm00001d036356_P005 | Maize | nucleus | 20.51 | 20.46 |
| Zm00001d045123_P001 | Maize | nucleus | 18.43 | 19.85 |
| HORVU2Hr1G013090.1 | Barley | nucleus | 17.28 | 19.79 |
| GSMUA_Achr9P30360_001 | Banana | nucleus | 11.98 | 16.77 |
| Os06t0181300-01 | Rice | nucleus | 12.9 | 16.72 |
| GSMUA_Achr4P27790_001 | Banana | nucleus | 10.6 | 16.49 |
| OQU75965 | Sorghum | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole | 21.43 | 13.88 |
| EES15771 | Sorghum | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, plastid, vacuole | 21.2 | 13.73 |
| Zm00001d013827_P001 | Maize | extracellular, nucleus | 15.9 | 11.54 |
| OQU91491 | Sorghum | nucleus | 15.44 | 11.39 |
Protein Annotations
| EnsemblPlants:CDY32992 | EnsemblPlantsGene:GSBRNA2T00053210001 | Gene3D:1.10.246.220 | GO:A0A078H6E7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR21717 | PANTHER:PTHR21717:SF39 | PFAM:PF13921 | PFscan:PS51294 | ProteinID:CDY32992 | ProteinID:CDY32992.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF0514 | UniProt:A0A078H6E7 | MapMan:15.5.2.2 | : |
Description
BnaA10g11980DBnaA10g11980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6E7]
Coordinates
chrLK032304:-:83355..85233
Molecular Weight (calculated)
48954.2 Da
IEP (calculated)
4.881
GRAVY (calculated)
-0.760
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMDKWVAE FLIRSQHNPT VSPTHLLSAL RFGDSDDCVT LKVSSVLRDL YDSLLRGSVD EGTLDLLEIL EKLQRSVITE SHKSAYCWTA AECTLRFMWP
101: LDPLDGLFTD ALERIWTKRI GSLKESGSGL VSDELVKWET DLKKAVEDPE MYQRIRESNI RYTAISFLNQ LLKEQWGLLG SSSLEAVAQR RFRNRKGENN
201: VEGDGVRSRE GLNGVDERTG RMESDNIDNS NENGDNRDVE GVGCLEDDGI DKVNEQLAAE EEGTMGSQEQ EHESSLDKGD KMAARELKDY LLEIQRQIDP
301: PSTRQVQEPN NAFDHSVNVT PQPSRVNRTG TSGQDHIETP DNASEKGSSS QGTWSGRVRP RLSSPVPLNV SPLKKINSTV RRPKKFWTPE EVEALRAGVK
401: EYGKAWKDIK NANPAVLAER TEVDLKDKWR NLVR
101: LDPLDGLFTD ALERIWTKRI GSLKESGSGL VSDELVKWET DLKKAVEDPE MYQRIRESNI RYTAISFLNQ LLKEQWGLLG SSSLEAVAQR RFRNRKGENN
201: VEGDGVRSRE GLNGVDERTG RMESDNIDNS NENGDNRDVE GVGCLEDDGI DKVNEQLAAE EEGTMGSQEQ EHESSLDKGD KMAARELKDY LLEIQRQIDP
301: PSTRQVQEPN NAFDHSVNVT PQPSRVNRTG TSGQDHIETP DNASEKGSSS QGTWSGRVRP RLSSPVPLNV SPLKKINSTV RRPKKFWTPE EVEALRAGVK
401: EYGKAWKDIK NANPAVLAER TEVDLKDKWR NLVR
001: MEVIDQWVAE FFLLRQHNPR ASPINLISAL KLGDSSDCIK LKISSVLRDI SNSLIRGTID EGMLDLLEIL EKLLLQQHSL LMDSHKSAYC WTATECTLRF
101: MWPMFASDGL FTDALERIWT KRIGILKESG SDLVTCDLLK WESDLKKALG DPELYQRIRE TNIRYTAISF LTQLLKEQWA LLGSSSLESV AQRRFLKRKA
201: VNVEGDVVDN RGDQSDVDES TRRFGSDTID IANEARGERE DGNGIGRDNA NDGEGMECLE NDGIDNVNAA DEEHTVSAQD QEHEPSLDKG DEMAARELKE
301: YLVEIQGHID PSTRQGEEPN SAIDHSVDVT PPPTRVNRTG TGCQDHNEAS DNVNEKGSDS QETWSSRVRP RRPTPVTLSV SPLKKGGLAK PHVRRPKKFW
401: KPEEVEALRE GVKEYGKSWK DIKNGNPTVF AERTEVDLKD KWRNLVGG
101: MWPMFASDGL FTDALERIWT KRIGILKESG SDLVTCDLLK WESDLKKALG DPELYQRIRE TNIRYTAISF LTQLLKEQWA LLGSSSLESV AQRRFLKRKA
201: VNVEGDVVDN RGDQSDVDES TRRFGSDTID IANEARGERE DGNGIGRDNA NDGEGMECLE NDGIDNVNAA DEEHTVSAQD QEHEPSLDKG DEMAARELKE
301: YLVEIQGHID PSTRQGEEPN SAIDHSVDVT PPPTRVNRTG TGCQDHNEAS DNVNEKGSDS QETWSSRVRP RRPTPVTLSV SPLKKGGLAK PHVRRPKKFW
401: KPEEVEALRE GVKEYGKSWK DIKNGNPTVF AERTEVDLKD KWRNLVGG
Arabidopsis Description
Myb-like HTH transcriptional regulator family protein [Source:UniProtKB/TrEMBL;Acc:Q5XUY3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.