Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024213_P001 | Maize | nucleus | 71.22 | 74.23 |
| Zm00001d049464_P001 | Maize | nucleus | 66.79 | 69.35 |
| Os08t0178800-01 | Rice | nucleus | 59.78 | 57.65 |
| CDY28768 | Canola | cytosol, nucleus, plastid | 22.14 | 43.8 |
| Bra019058.1-P | Field mustard | cytosol | 29.89 | 39.51 |
| Solyc10g006750.2.1 | Tomato | nucleus | 15.13 | 39.42 |
| GSMUA_Achr3P22980_001 | Banana | cytosol, nucleus, plastid | 29.89 | 38.94 |
| KRH21598 | Soybean | cytosol, nucleus, plastid | 21.77 | 38.31 |
| CDY42453 | Canola | cytosol | 25.46 | 38.12 |
| Bra002986.1-P | Field mustard | cytosol | 25.46 | 37.91 |
| PGSC0003DMT400057529 | Potato | nucleus | 26.57 | 37.89 |
| KRH10724 | Soybean | cytosol, nucleus, plastid | 21.03 | 37.5 |
| KRH56068 | Soybean | cytosol, nucleus, plastid | 24.35 | 37.29 |
| KRH25450 | Soybean | cytosol, nucleus, plastid | 23.62 | 36.99 |
| Bra022722.1-P | Field mustard | cytosol, nucleus, plastid | 27.31 | 36.82 |
| CDY18333 | Canola | nucleus | 24.35 | 36.67 |
| GSMUA_Achr8P07440_001 | Banana | nucleus | 23.99 | 34.76 |
| Bra026361.1-P | Field mustard | cytosol, nucleus, plastid | 29.15 | 34.35 |
| VIT_00s0347g00030.t01 | Wine grape | nucleus | 26.57 | 33.96 |
| VIT_00s0203g00210.t01 | Wine grape | nucleus | 26.94 | 33.95 |
| AT5G54470.1 | Thale cress | cytosol | 26.94 | 33.95 |
| Bra010408.1-P | Field mustard | cytosol, nucleus, plastid | 29.89 | 33.61 |
| Solyc02g079430.2.1 | Tomato | nucleus | 22.88 | 33.51 |
| AT4G27310.1 | Thale cress | cytosol, nucleus, plastid | 27.31 | 33.18 |
| KRH26865 | Soybean | nucleus | 26.94 | 33.03 |
| KRH22488 | Soybean | nucleus | 26.57 | 32.58 |
| Solyc12g005660.1.1 | Tomato | cytosol, nucleus, plastid | 22.88 | 30.69 |
| PGSC0003DMT400035751 | Potato | cytosol, nucleus, plastid | 23.25 | 30.58 |
| GSMUA_Achr11P... | Banana | nucleus | 23.99 | 29.28 |
| VIT_12s0134g00400.t01 | Wine grape | nucleus | 32.1 | 29.1 |
| PGSC0003DMT400067337 | Potato | nucleus | 26.94 | 28.4 |
| KRH55436 | Soybean | nucleus | 22.51 | 28.24 |
| Solyc07g053140.2.1 | Tomato | cytosol, nucleus, plastid | 26.57 | 28.02 |
| PGSC0003DMT400064406 | Potato | nucleus | 23.25 | 27.16 |
| VIT_19s0014g03960.t01 | Wine grape | nucleus | 26.94 | 24.5 |
| GSMUA_Achr5P26340_001 | Banana | nucleus | 29.89 | 22.56 |
Protein Annotations
| EnsemblPlants:EES14650 | EnsemblPlantsGene:SORBI_3007G062100 | EntrezGene:8080907 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31717 |
| PANTHER:PTHR31717:SF26 | ProteinID:EES14650 | ProteinID:EES14650.1 | RefSeq:XP_002445155.1 | SEG:seg | SMART:SM00336 |
| UniParc:UPI0001A87D48 | UniProt:C5YHX7 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:6507851..6510379
Molecular Weight (calculated)
27602.8 Da
IEP (calculated)
4.395
GRAVY (calculated)
-0.750
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAAAGEGG KERGGAGAGP GGACELCGAA ARVYCGADEA TLCWGCDAQV HGANFLVARH ARALLCRGCA RPTPWRAAGP RLGPTASLCD RCVRRGPGAV
101: GVGGGDEEMG GAGDGRGHEE EDHDDDGGDD DDEVVVEDDE DEEEEEEEGE GENQVVPWTE EAEATPPPVA SSTSSSSREA PANGASAADC AKENMPCSTS
201: QPGLCHHLSS AHHGGRSDEA TSSRNGGRFL ASSRHRKRSP SDFFSSGSAQ SGSGTPARNC SNAGIGRNDF T
101: GVGGGDEEMG GAGDGRGHEE EDHDDDGGDD DDEVVVEDDE DEEEEEEEGE GENQVVPWTE EAEATPPPVA SSTSSSSREA PANGASAADC AKENMPCSTS
201: QPGLCHHLSS AHHGGRSDEA TSSRNGGRFL ASSRHRKRSP SDFFSSGSAQ SGSGTPARNC SNAGIGRNDF T
001: MGKKCDLCNG VARMYCESDQ ASLCWDCDGK VHGANFLVAK HTRCLLCSAC QSLTPWKATG LRLGPTFSVC ESCVALKNAG GGRGNRVLSE NRGQEEVNSF
101: ESEEDRIRED HGDGDDAESY DDDEEEDEDE EYSDDEDEDD DEDGDDEEAE NQVVPWSAAA QVPPVMSSSS SDGGSGGSVT KRTRARENSD LLCSDDEIGS
201: SSAQGSNYSR PLKRSAFKST VVV
101: ESEEDRIRED HGDGDDAESY DDDEEEDEDE EYSDDEDEDD DEDGDDEEAE NQVVPWSAAA QVPPVMSSSS SDGGSGGSVT KRTRARENSD LLCSDDEIGS
201: SSAQGSNYSR PLKRSAFKST VVV
Arabidopsis Description
BBX28 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D3]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.