Factsheet for Os05t0376000-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G237800.3	Wheat	cytosol	79.9	45.88
TraesCS1B01G249300.1	Wheat	cytosol	79.9	45.75
HORVU1Hr1G057660.1	Barley	cytosol	79.43	45.6
TraesCS1A01G234200.1	Wheat	cytosol	79.43	45.48
Os01t0945800-01	Rice	nucleus	76.56	44.08
GSMUA_Achr4P24260_001	Banana	cytosol	64.11	40.73
VIT_07s0031g00600.t01	Wine grape	cytosol	67.94	39.55
KRH77004	Soybean	nucleus	66.99	38.67
KRH28467	Soybean	cytosol	66.99	38.36
GSMUA_Achr2P14710_001	Banana	cytosol	65.55	38.16
AT4G36960.2	Thale cress	cytosol	65.07	35.88
CDY42724	Canola	cytosol	64.59	35.62
PGSC0003DMT400010280	Potato	cytosol	63.16	35.58
Solyc02g090910.2.1	Tomato	nucleus	63.64	35.37
CDY69852	Canola	cytosol	64.59	35.34
Bra017802.1-P	Field mustard	nucleus	64.59	33.09
CDX69279	Canola	nucleus	27.27	24.15
Os06t0566100-01	Rice	cytosol, nucleus	27.75	19.86
Os02t0221500-01	Rice	nucleus	28.23	14.86
Os08t0320100-01	Rice	nucleus	22.97	13.71
Os11t0637700-01	Rice	plasma membrane	29.67	13.28
Os07t0584500-01	Rice	nucleus	28.71	12.71
Os07t0124600-01	Rice	nucleus	21.05	11.67
Os08t0492100-02	Rice	nucleus	21.05	10.09
Os02t0755400-01	Rice	plastid	8.13	9.66
Os02t0602600-00	Rice	nucleus	14.83	8.03
Os01t0614500-01	Rice	nucleus	16.75	7.83
Os06t0622900-01	Rice	cytosol, mitochondrion, nucleus	10.05	7.64
Os01t0265800-01	Rice	nucleus	17.22	7.35
Os02t0714000-01	Rice	nucleus, plastid	9.57	6.97
Os01t0876800-00	Rice	nucleus	9.57	6.67
Os04t0636900-02	Rice	nucleus	16.27	6.6
Os06t0220600-01	Rice	plastid	9.57	5.83
Os03t0286500-01	Rice	cytosol, nucleus, plastid	8.61	5.81
Os01t0958500-01	Rice	nucleus	8.61	5.81

Protein Annotations

EnsemblPlants:Os05t0376000-00	EnsemblPlantsGene:Os05g0376000	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf	InterPro:RRM_dom
PANTHER:PTHR45519	PFAM:PF00076	PFscan:PS50102	ProteinID:BAS93728.1	SEG:seg	SMART:SM00360
SUPFAM:SSF54928	UniParc:UPI000393B4E9	UniProt:A0A0P0WLK9	MapMan:35.2	:	:

Description

Hypothetical conserved gene. (Os05t0376000-00)

Coordinates

chr5:-:18148238..18157670

Molecular Weight (calculated)

23395.9 Da

IEP (calculated)

9.503

GRAVY (calculated)

-0.438

Length

209 amino acids

Sequence
(BLAST)

001: MVIWLSPLIT FINSSQKVVK DEHILGNRTL EVKIATPKEE MRAPGIKKAT RIFVARIPQS VDESKFRRHF EAFGEIIDLY MPKELRSKSH RGIGFITFRS
101: AECVDNIMQE THELDGTTVA VDRATPKDED VRHPPRRVVQ GGYGAYNAYI TAATRYAALG TPTSYDHPGP AYGRGHLGGS LGTGKKIFVG RLPQEANTDD
201: LWDYFGRFG

Best Arabidopsis Sequence Match ( AT4G36960.2 )
(BLAST)

001: MERKLVVLGI PWDIDSDGLK DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASAEDAKNA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPS
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY

Arabidopsis Description

AT4g36960/C7A10_400 [Source:UniProtKB/TrEMBL;Acc:Q94AC3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.