Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42724 | Canola | cytosol | 98.69 | 99.47 |
| AT4G36960.2 | Thale cress | cytosol | 91.62 | 92.35 |
| Bra017802.1-P | Field mustard | nucleus | 97.64 | 91.42 |
| VIT_07s0031g00600.t01 | Wine grape | cytosol | 69.9 | 74.37 |
| KRH77004 | Soybean | nucleus | 70.42 | 74.31 |
| KRH28467 | Soybean | cytosol | 69.63 | 72.88 |
| PGSC0003DMT400010280 | Potato | cytosol | 69.11 | 71.16 |
| CDX69277 | Canola | mitochondrion | 34.55 | 70.97 |
| GSMUA_Achr4P24260_001 | Banana | cytosol | 60.73 | 70.52 |
| Solyc02g090910.2.1 | Tomato | nucleus | 68.85 | 69.95 |
| GSMUA_Achr2P14710_001 | Banana | cytosol | 63.87 | 67.97 |
| Zm00001d011885_P008 | Maize | cytosol | 63.35 | 67.22 |
| KXG34100 | Sorghum | cytosol | 62.83 | 66.67 |
| Os01t0945800-01 | Rice | nucleus | 63.35 | 66.67 |
| Os05t0376000-00 | Rice | cytosol | 35.34 | 64.59 |
| HORVU1Hr1G057660.1 | Barley | cytosol | 60.21 | 63.19 |
| TraesCS1D01G237800.3 | Wheat | cytosol | 59.95 | 62.91 |
| TraesCS1B01G249300.1 | Wheat | cytosol | 59.95 | 62.74 |
| TraesCS1A01G234200.1 | Wheat | cytosol | 59.42 | 62.19 |
| TraesCS3B01G532600.3 | Wheat | cytosol | 53.4 | 54.69 |
| TraesCS3A01G485000.1 | Wheat | cytosol | 53.14 | 54.42 |
| TraesCS3D01G480300.1 | Wheat | cytosol | 53.14 | 54.42 |
| HORVU3Hr1G105930.10 | Barley | cytoskeleton, cytosol, nucleus | 52.62 | 54.18 |
| Zm00001d042133_P003 | Maize | cytosol | 52.36 | 50.25 |
| CDX69279 | Canola | nucleus | 28.53 | 46.19 |
| CDY67299 | Canola | nucleus | 26.18 | 26.25 |
| CDY23739 | Canola | nucleus | 25.92 | 25.85 |
| CDX75170 | Canola | extracellular | 10.99 | 25.77 |
| CDY17173 | Canola | nucleus | 25.13 | 25.46 |
| CDY12068 | Canola | nucleus | 23.82 | 25.42 |
| CDY48318 | Canola | nucleus | 24.61 | 25.27 |
| CDY37724 | Canola | nucleus | 21.2 | 25.08 |
| CDY26229 | Canola | nucleus | 24.08 | 24.8 |
| CDX79527 | Canola | nucleus | 26.18 | 24.63 |
| CDX90262 | Canola | nucleus | 24.35 | 24.35 |
| CDY51790 | Canola | cytosol | 6.81 | 24.3 |
| CDY28822 | Canola | cytosol, nucleus, plastid | 7.07 | 24.11 |
| CDX84689 | Canola | nucleus | 25.39 | 23.77 |
| CDY24201 | Canola | nucleus | 21.47 | 22.65 |
| CDY43360 | Canola | nucleus | 21.47 | 22.65 |
| CDY17719 | Canola | cytoskeleton, cytosol, nucleus | 23.82 | 21.93 |
| CDX77783 | Canola | nucleus | 24.35 | 21.88 |
| CDY41059 | Canola | nucleus | 24.35 | 21.78 |
| CDY07975 | Canola | nucleus | 26.44 | 21.44 |
| CDY42061 | Canola | cytosol, nucleus, plastid | 20.16 | 21.21 |
| CDX74030 | Canola | nucleus | 26.18 | 21.19 |
| CDY46690 | Canola | nucleus | 23.56 | 21.03 |
| CDY22136 | Canola | nucleus | 26.7 | 20.99 |
| CDY50131 | Canola | nucleus | 20.68 | 20.68 |
| CDY66272 | Canola | nucleus | 26.18 | 20.45 |
| CDY35966 | Canola | nucleus | 26.44 | 20.45 |
| CDY48851 | Canola | cytosol, nucleus, peroxisome | 19.37 | 20.33 |
| CDX73279 | Canola | cytosol | 12.83 | 20.25 |
| CDX92807 | Canola | nucleus | 23.82 | 20.22 |
| CDX94301 | Canola | nucleus | 23.3 | 20.14 |
| CDY46689 | Canola | nucleus | 24.35 | 20.09 |
| CDY45879 | Canola | cytosol, nucleus, plastid | 18.06 | 19.94 |
| CDY31508 | Canola | nucleus | 12.83 | 19.6 |
| CDY44555 | Canola | cytosol, nucleus, plastid | 18.59 | 19.56 |
| CDY36753 | Canola | nucleus | 21.99 | 19.31 |
| CDX89316 | Canola | endoplasmic reticulum | 22.51 | 19.24 |
| CDY58169 | Canola | cytosol, nucleus, plasma membrane | 20.68 | 19.22 |
| CDY69197 | Canola | nucleus | 11.26 | 19.11 |
| CDY04769 | Canola | nucleus | 11.78 | 18.99 |
| CDY11989 | Canola | nucleus | 21.47 | 18.98 |
| CDY31859 | Canola | nucleus | 11.78 | 18.67 |
| CDY28918 | Canola | mitochondrion | 23.56 | 18.59 |
| CDY29496 | Canola | nucleus | 12.57 | 18.39 |
| CDY01349 | Canola | nucleus | 11.52 | 18.26 |
| CDX96615 | Canola | nucleus | 12.04 | 18.25 |
| CDY55846 | Canola | nucleus | 19.11 | 18.2 |
| CDY26001 | Canola | nucleus | 18.59 | 17.44 |
| CDY33653 | Canola | nucleus | 11.52 | 17.39 |
| CDY25759 | Canola | nucleus | 11.26 | 17.27 |
| CDX88283 | Canola | nucleus | 12.57 | 17.14 |
| CDY25867 | Canola | nucleus | 18.06 | 17.04 |
| CDY25957 | Canola | nucleus | 24.61 | 17.0 |
| CDY24106 | Canola | nucleus | 18.32 | 16.95 |
| CDY41556 | Canola | nucleus | 12.83 | 16.9 |
| CDY36357 | Canola | nucleus | 23.04 | 16.24 |
| CDY02889 | Canola | nucleus | 9.16 | 16.13 |
| CDY42577 | Canola | nucleus | 22.77 | 15.96 |
| CDX80046 | Canola | nucleus | 12.83 | 15.51 |
| CDY41557 | Canola | nucleus | 12.83 | 15.51 |
| CDY64698 | Canola | nucleus | 10.47 | 15.33 |
| CDX87594 | Canola | nucleus | 12.83 | 15.31 |
| CDX73451 | Canola | cytosol | 9.95 | 15.2 |
| CDX68024 | Canola | nucleus | 11.26 | 15.19 |
| CDX87460 | Canola | nucleus | 11.26 | 15.09 |
| CDY13339 | Canola | mitochondrion | 6.54 | 14.88 |
| CDX88432 | Canola | nucleus | 10.99 | 14.79 |
| CDY13782 | Canola | nucleus | 11.78 | 14.66 |
| CDX79253 | Canola | nucleus | 10.73 | 14.64 |
| CDY27523 | Canola | nucleus | 12.3 | 14.55 |
| CDY21356 | Canola | nucleus | 10.99 | 14.48 |
| CDY06947 | Canola | nucleus | 16.23 | 14.42 |
| CDY48016 | Canola | nucleus | 12.3 | 14.42 |
| CDX72106 | Canola | nucleus | 17.02 | 14.29 |
| CDX78261 | Canola | nucleus | 9.69 | 14.29 |
| CDY27186 | Canola | nucleus | 16.75 | 14.25 |
| CDY46642 | Canola | nucleus | 10.73 | 14.19 |
| CDX76015 | Canola | nucleus | 11.26 | 14.1 |
| CDY57580 | Canola | nucleus | 16.23 | 14.0 |
| CDX76950 | Canola | nucleus | 11.26 | 13.96 |
| CDY21399 | Canola | mitochondrion | 5.24 | 13.79 |
| CDY40554 | Canola | nucleus | 23.56 | 13.72 |
| CDY67263 | Canola | nucleus | 11.78 | 13.72 |
| CDY08023 | Canola | nucleus | 12.57 | 13.33 |
| CDX74070 | Canola | cytosol | 12.04 | 12.78 |
| CDY00446 | Canola | nucleus | 10.73 | 12.06 |
| CDY05301 | Canola | nucleus | 10.99 | 11.97 |
| CDY24657 | Canola | nucleus | 10.47 | 11.76 |
| CDY15850 | Canola | nucleus | 10.73 | 11.08 |
| CDY47382 | Canola | golgi, plastid | 10.73 | 9.86 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078JWC7 | UniProt:A0A078JWC7 | EnsemblPlants:CDY69852 | ProteinID:CDY69852 |
| ProteinID:CDY69852.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00093064001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR45519 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EB1C86 | SEG:seg |
Description
BnaC07g51230DBnaC07g51230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWC7]
Coordinates
chrLK040493:+:795..3663
Molecular Weight (calculated)
41855.1 Da
IEP (calculated)
7.676
GRAVY (calculated)
-0.557
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKLVVLGI PWEIDSDGLR DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASSQDAKDA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPP
101: SVSESDFRRH FEKYGEITDL YMPKDHNSKQ HRGIGFITFA TSDSVEDLME DTHDLGGTTV AVDRATPKED DPPPRPPPAA RMQRPPVAVA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNAASFYGR AEPTRGIGNK IFVGRLPQEA SVDDLRDYFG RFGRIQDAYI PKDPKRSGHR GFGFVTFAEN GVADRVARRS
301: HEICGQEVAI DSATPLDEAG PIAGGSSTLS SSSSRPEYFG GYGGGPVRAF GRMYGGAMSL DDWGYGVPSA RPSRSDWRYR PY
101: SVSESDFRRH FEKYGEITDL YMPKDHNSKQ HRGIGFITFA TSDSVEDLME DTHDLGGTTV AVDRATPKED DPPPRPPPAA RMQRPPVAVA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNAASFYGR AEPTRGIGNK IFVGRLPQEA SVDDLRDYFG RFGRIQDAYI PKDPKRSGHR GFGFVTFAEN GVADRVARRS
301: HEICGQEVAI DSATPLDEAG PIAGGSSTLS SSSSRPEYFG GYGGGPVRAF GRMYGGAMSL DDWGYGVPSA RPSRSDWRYR PY
001: MERKLVVLGI PWDIDSDGLK DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASAEDAKNA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPS
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
Arabidopsis Description
AT4g36960/C7A10_400 [Source:UniProtKB/TrEMBL;Acc:Q94AC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.