Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022145.1-P | Field mustard | nucleus | 86.57 | 91.09 |
| CDY17719 | Canola | cytoskeleton, cytosol, nucleus | 75.21 | 87.71 |
| CDY41059 | Canola | nucleus | 77.27 | 87.59 |
| CDX77783 | Canola | nucleus | 76.24 | 86.82 |
| AT5G47620.4 | Thale cress | cytoskeleton, cytosol, nucleus | 76.65 | 81.9 |
| CDY25957 | Canola | nucleus | 76.03 | 66.55 |
| CDY40554 | Canola | nucleus | 90.08 | 66.46 |
| CDY50131 | Canola | nucleus | 51.24 | 64.92 |
| CDY58169 | Canola | cytosol, nucleus, plasma membrane | 52.69 | 62.04 |
| GSMUA_Achr10P... | Banana | nucleus | 42.56 | 46.82 |
| GSMUA_Achr10P... | Banana | nucleus | 43.18 | 45.43 |
| Os07t0584500-01 | Rice | nucleus | 44.21 | 45.34 |
| HORVU0Hr1G008280.1 | Barley | nucleus | 43.18 | 45.14 |
| TraesCS4A01G150600.1 | Wheat | nucleus | 43.18 | 45.14 |
| Os11t0637700-01 | Rice | plasma membrane | 43.39 | 44.97 |
| TraesCS4D01G152200.1 | Wheat | nucleus | 42.98 | 44.92 |
| TraesCSU01G068500.1 | Wheat | nucleus | 42.98 | 44.92 |
| GSMUA_Achr6P10970_001 | Banana | nucleus | 46.28 | 44.8 |
| CDX74030 | Canola | nucleus | 43.18 | 44.28 |
| CDY07975 | Canola | nucleus | 42.98 | 44.16 |
| TraesCS2B01G216600.2 | Wheat | cytosol | 42.98 | 44.16 |
| Zm00001d019079_P001 | Maize | cytosol | 40.7 | 43.97 |
| GSMUA_Achr4P33100_001 | Banana | nucleus | 40.08 | 43.89 |
| TraesCS2D01G197500.2 | Wheat | nucleus | 42.56 | 43.83 |
| Zm00001d007772_P001 | Maize | nucleus | 40.29 | 43.43 |
| EER96020 | Sorghum | nucleus | 40.7 | 43.3 |
| CDY22136 | Canola | nucleus | 43.39 | 43.21 |
| EER98147 | Sorghum | nucleus | 40.29 | 43.05 |
| EER97452 | Sorghum | nucleus | 41.74 | 42.89 |
| CDY66272 | Canola | nucleus | 42.56 | 42.13 |
| CDY11989 | Canola | nucleus | 36.98 | 41.44 |
| Zm00001d019084_P002 | Maize | nucleus | 38.84 | 41.41 |
| CDY35966 | Canola | nucleus | 42.15 | 41.3 |
| Zm00001d006704_P002 | Maize | nucleus | 41.12 | 41.12 |
| CDX92807 | Canola | nucleus | 38.22 | 41.11 |
| CDY36753 | Canola | nucleus | 36.78 | 40.92 |
| CDX94301 | Canola | nucleus | 37.19 | 40.72 |
| CDX89316 | Canola | endoplasmic reticulum | 37.6 | 40.72 |
| CDY46690 | Canola | nucleus | 35.54 | 40.19 |
| CDY46689 | Canola | nucleus | 37.81 | 39.52 |
| TraesCS2A01G190400.1 | Wheat | plastid | 42.98 | 39.17 |
| CDX75170 | Canola | extracellular | 13.02 | 38.65 |
| CDY12068 | Canola | nucleus | 28.1 | 37.99 |
| Zm00001d019086_P001 | Maize | nucleus | 40.91 | 37.22 |
| Zm00001d021950_P007 | Maize | endoplasmic reticulum, nucleus | 41.32 | 36.97 |
| CDY23739 | Canola | nucleus | 29.13 | 36.81 |
| CDY67299 | Canola | nucleus | 28.51 | 36.22 |
| CDX90262 | Canola | nucleus | 28.51 | 36.13 |
| CDY17173 | Canola | nucleus | 28.1 | 36.07 |
| OQU83904 | Sorghum | nucleus | 33.26 | 35.78 |
| CDX84689 | Canola | nucleus | 29.55 | 35.05 |
| CDX79527 | Canola | nucleus | 29.13 | 34.73 |
| CDY37724 | Canola | nucleus | 22.52 | 33.75 |
| GSMUA_Achr3P02300_001 | Banana | nucleus | 43.59 | 31.08 |
| CDY26229 | Canola | nucleus | 22.93 | 29.92 |
| CDY48318 | Canola | nucleus | 22.93 | 29.84 |
| CDY24201 | Canola | nucleus | 21.9 | 29.28 |
| CDY43360 | Canola | nucleus | 21.9 | 29.28 |
| CDY48851 | Canola | cytosol, nucleus, peroxisome | 21.69 | 28.85 |
| CDY42061 | Canola | cytosol, nucleus, plastid | 21.49 | 28.65 |
| CDY45879 | Canola | cytosol, nucleus, plastid | 20.04 | 28.03 |
| CDY44555 | Canola | cytosol, nucleus, plastid | 20.66 | 27.55 |
| CDY51790 | Canola | cytosol | 5.99 | 27.1 |
| CDY28822 | Canola | cytosol, nucleus, plastid | 6.2 | 26.79 |
| CDY69852 | Canola | cytosol | 18.59 | 23.56 |
| CDY42724 | Canola | cytosol | 18.39 | 23.48 |
| CDY36357 | Canola | nucleus | 25.62 | 22.88 |
| CDY42577 | Canola | nucleus | 25.21 | 22.39 |
| CDY04769 | Canola | nucleus | 10.74 | 21.94 |
| CDY31508 | Canola | nucleus | 11.16 | 21.6 |
| CDY69197 | Canola | nucleus | 9.92 | 21.33 |
| CDY33653 | Canola | nucleus | 10.95 | 20.95 |
| CDY01349 | Canola | nucleus | 10.33 | 20.75 |
| CDY31859 | Canola | nucleus | 10.33 | 20.75 |
| CDX73279 | Canola | cytosol | 10.33 | 20.66 |
| CDY25759 | Canola | nucleus | 10.54 | 20.48 |
| CDX69279 | Canola | nucleus | 9.92 | 20.34 |
| CDY29496 | Canola | nucleus | 10.95 | 20.31 |
| CDX96615 | Canola | nucleus | 10.54 | 20.24 |
| CDY02889 | Canola | nucleus | 8.88 | 19.82 |
| CDX88283 | Canola | nucleus | 11.36 | 19.64 |
| CDY41556 | Canola | nucleus | 11.16 | 18.62 |
| CDX73451 | Canola | cytosol | 9.5 | 18.4 |
| CDX79253 | Canola | nucleus | 10.54 | 18.21 |
| CDX68024 | Canola | nucleus | 10.54 | 18.02 |
| CDX88432 | Canola | nucleus | 10.54 | 17.96 |
| CDX87460 | Canola | nucleus | 10.54 | 17.89 |
| CDX80046 | Canola | nucleus | 11.36 | 17.41 |
| CDX78261 | Canola | nucleus | 9.3 | 17.37 |
| CDY27523 | Canola | nucleus | 11.57 | 17.34 |
| CDY21356 | Canola | nucleus | 10.33 | 17.24 |
| CDX87594 | Canola | nucleus | 11.36 | 17.19 |
| CDY48016 | Canola | nucleus | 11.57 | 17.18 |
| CDY41557 | Canola | nucleus | 11.16 | 17.09 |
| CDY08023 | Canola | nucleus | 12.6 | 16.94 |
| CDY46642 | Canola | nucleus | 9.92 | 16.61 |
| CDY26001 | Canola | nucleus | 13.84 | 16.46 |
| CDX74070 | Canola | cytosol | 12.19 | 16.39 |
| CDY24106 | Canola | nucleus | 13.84 | 16.22 |
| CDY64698 | Canola | nucleus | 8.68 | 16.09 |
| CDY25867 | Canola | nucleus | 13.43 | 16.05 |
| CDY55846 | Canola | nucleus | 13.22 | 15.96 |
| CDY67263 | Canola | nucleus | 10.54 | 15.55 |
| CDY00446 | Canola | nucleus | 10.33 | 14.71 |
| CDY13782 | Canola | nucleus | 9.3 | 14.66 |
| CDY21399 | Canola | mitochondrion | 4.34 | 14.48 |
| CDX76950 | Canola | nucleus | 9.09 | 14.29 |
| CDY27186 | Canola | nucleus | 13.02 | 14.03 |
| CDX72106 | Canola | nucleus | 13.02 | 13.85 |
| CDY24657 | Canola | nucleus | 9.5 | 13.53 |
| CDX76015 | Canola | nucleus | 8.47 | 13.44 |
| CDY05301 | Canola | nucleus | 9.5 | 13.11 |
| CDY13339 | Canola | mitochondrion | 4.55 | 13.1 |
| CDY57580 | Canola | nucleus | 11.98 | 13.09 |
| CDY06947 | Canola | nucleus | 11.36 | 12.79 |
| CDY15850 | Canola | nucleus | 9.5 | 12.43 |
| CDX69277 | Canola | mitochondrion | 4.34 | 11.29 |
| CDY47382 | Canola | golgi, plastid | 8.88 | 10.34 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078GWB3 | UniProt:A0A078GWB3 | EnsemblPlants:CDY28918 | ProteinID:CDY28918 |
| ProteinID:CDY28918.1 | InterPro:DAZAP1_RRM2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00041614001 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44291 | PANTHER:PTHR44291:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0004EE7AE5 | SEG:seg | : | : | : | : |
Description
BnaA02g25580DBnaA02g25580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWB3]
Coordinates
chrLK032228:+:62305..65045
Molecular Weight (calculated)
52581.3 Da
IEP (calculated)
9.784
GRAVY (calculated)
-0.357
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRLKGVYY NTNQQRISIS LLLPLLPFLK LRNPGSWVDR FSQSDQDPVV RFNPSLFSKR MEMESCKLFI GGISWETTED RLREYFQSFG EVLEAVIMKD
101: RATGRARGFG FLVFSDPIVA ERVVLLRHVI DGKLVEAKKA VPRDDHLVLN KSNNTSLQGS PGPANSKKIF VGGLASSVTE AEFKKYFAQF GVITDVVVMY
201: DHRTQRPRGF GFISFESEDA VDKVLQRTFH ELNGKMVEVK LAVPKEMALN PIRNQMNVNS FGNSRISALL MNEYTQGFSP SPISGYGVKP EVRYSPGLGN
301: RGGGFSPFGH GYGIELNFEP DQSQNFGSGS SAGFGRPFSP GYAARLGRYG SQIESGGVGN GSVLNAATKN QLWGNGGGLG YMSNSPISRS SFNGMSSLGS
401: IGDNWGRNSY RSEGGGGLGL EAMRGAHVGG YSSGSSSLEN DSLYSDSAWL SLPAKAEERM GAFDFMSRGP AGYINRQPNG GIAA
101: RATGRARGFG FLVFSDPIVA ERVVLLRHVI DGKLVEAKKA VPRDDHLVLN KSNNTSLQGS PGPANSKKIF VGGLASSVTE AEFKKYFAQF GVITDVVVMY
201: DHRTQRPRGF GFISFESEDA VDKVLQRTFH ELNGKMVEVK LAVPKEMALN PIRNQMNVNS FGNSRISALL MNEYTQGFSP SPISGYGVKP EVRYSPGLGN
301: RGGGFSPFGH GYGIELNFEP DQSQNFGSGS SAGFGRPFSP GYAARLGRYG SQIESGGVGN GSVLNAATKN QLWGNGGGLG YMSNSPISRS SFNGMSSLGS
401: IGDNWGRNSY RSEGGGGLGL EAMRGAHVGG YSSGSSSLEN DSLYSDSAWL SLPAKAEERM GAFDFMSRGP AGYINRQPNG GIAA
001: MEMESCKLFI GGISWETSED RLRDYFHSFG EVLEAVIMKD RATGRARGFG FVVFADPNVA ERVVLLKHII DGKIVEAKKA VPRDDHVVFN KSNSSLQGSP
101: GPSNSKKIFV GGLASSVTEA EFKKYFAQFG MITDVVVMYD HRTQRPRGFG FISYDSEEAV DKVLQKTFHE LNGKMVEVKL AVPKDMALNT MRNQMNVNSF
201: GTSRISSLLN EYTQGFSPSP ISGYGVKPEV RYSPAVGNRG GFSPFGHGYG IELNFEPNQT QNYGSGSSGG FGRPFSPGYA ASLGRFGSQM ESGGASVGNG
301: SVLNAAPKNH LWGNGGLGYM SNSPISRSSF SGNSGMSSLG SIGDNWGTVA RARSSYHGER GGVGLEAMRG VHVGGYSSGS SILEADSLYS DSMWLSLPAK
401: AEEGLGMGPL DFMSRGPAGY INRQPNGGIA A
101: GPSNSKKIFV GGLASSVTEA EFKKYFAQFG MITDVVVMYD HRTQRPRGFG FISYDSEEAV DKVLQKTFHE LNGKMVEVKL AVPKDMALNT MRNQMNVNSF
201: GTSRISSLLN EYTQGFSPSP ISGYGVKPEV RYSPAVGNRG GFSPFGHGYG IELNFEPNQT QNYGSGSSGG FGRPFSPGYA ASLGRFGSQM ESGGASVGNG
301: SVLNAAPKNH LWGNGGLGYM SNSPISRSSF SGNSGMSSLG SIGDNWGTVA RARSSYHGER GGVGLEAMRG VHVGGYSSGS SILEADSLYS DSMWLSLPAK
401: AEEGLGMGPL DFMSRGPAGY INRQPNGGIA A
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:F4JYK6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.