Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007277.1-P | Field mustard | nucleus | 98.44 | 98.44 |
| CDX72106 | Canola | nucleus | 96.66 | 95.38 |
| AT3G56860.10 | Thale cress | nucleus | 84.63 | 79.5 |
| CDX76015 | Canola | nucleus | 51.22 | 75.41 |
| CDY06947 | Canola | nucleus | 63.25 | 66.05 |
| CDY57580 | Canola | nucleus | 64.59 | 65.46 |
| KRG94993 | Soybean | nucleus | 61.02 | 57.2 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 58.57 | 56.8 |
| KRH66628 | Soybean | nucleus | 60.8 | 56.17 |
| CDY47382 | Canola | golgi, plastid | 48.78 | 52.64 |
| GSMUA_Achr6P15950_001 | Banana | nucleus | 50.33 | 48.5 |
| Zm00001d040344_P001 | Maize | extracellular, plasma membrane | 49.0 | 48.46 |
| EES02736 | Sorghum | plastid | 47.88 | 46.34 |
| TraesCS3B01G211700.1 | Wheat | nucleus | 45.21 | 44.81 |
| TraesCS3A01G181900.1 | Wheat | nucleus | 47.66 | 44.58 |
| TraesCS3D01G186500.1 | Wheat | nucleus | 47.66 | 44.58 |
| Os01t0265800-01 | Rice | nucleus | 47.88 | 43.88 |
| HORVU3Hr1G037280.1 | Barley | nucleus, plastid | 47.66 | 43.85 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 38.98 | 40.32 |
| CDY51790 | Canola | cytosol | 8.91 | 37.38 |
| CDY28822 | Canola | cytosol, nucleus, plastid | 9.13 | 36.61 |
| CDY55846 | Canola | nucleus | 30.73 | 34.41 |
| HORVU6Hr1G054690.5 | Barley | plastid | 14.25 | 34.04 |
| GSMUA_Achr10P... | Banana | nucleus | 17.37 | 33.77 |
| CDY24106 | Canola | nucleus | 30.96 | 33.66 |
| CDY26001 | Canola | nucleus | 30.29 | 33.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.85 | 33.33 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 30.51 | 33.09 |
| CDY25867 | Canola | nucleus | 29.84 | 33.09 |
| GSMUA_Achr4P09210_001 | Banana | nucleus | 32.29 | 32.81 |
| CDY13782 | Canola | nucleus | 21.6 | 31.6 |
| Os04t0636900-02 | Rice | nucleus | 36.08 | 31.46 |
| TraesCS2A01G526400.1 | Wheat | nucleus | 35.63 | 31.43 |
| TraesCS2D01G529100.1 | Wheat | nucleus | 35.63 | 31.43 |
| Os02t0602600-00 | Rice | nucleus | 26.95 | 31.35 |
| TraesCS2B01G556700.1 | Wheat | nucleus | 35.41 | 31.24 |
| KXG30578 | Sorghum | nucleus | 25.84 | 31.18 |
| CDX76950 | Canola | nucleus | 21.38 | 31.17 |
| Zm00001d002141_P006 | Maize | nucleus | 36.08 | 31.09 |
| EES12939 | Sorghum | nucleus | 35.63 | 30.36 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 34.97 | 30.13 |
| EES10068 | Sorghum | nucleus | 26.28 | 27.38 |
| CDY15850 | Canola | nucleus | 21.83 | 26.49 |
| CDY31859 | Canola | nucleus | 13.14 | 24.48 |
| HORVU2Hr1G116230.1 | Barley | nucleus | 21.83 | 24.14 |
| CDY33653 | Canola | nucleus | 12.92 | 22.92 |
| CDY01349 | Canola | nucleus | 12.25 | 22.82 |
| CDY31508 | Canola | nucleus | 12.69 | 22.8 |
| CDX96615 | Canola | nucleus | 12.47 | 22.22 |
| CDY02889 | Canola | nucleus | 10.47 | 21.66 |
| CDY24201 | Canola | nucleus | 17.37 | 21.55 |
| CDY43360 | Canola | nucleus | 17.37 | 21.55 |
| CDY29496 | Canola | nucleus | 12.47 | 21.46 |
| CDY69197 | Canola | nucleus | 10.69 | 21.33 |
| CDX75170 | Canola | extracellular | 7.57 | 20.86 |
| CDX73451 | Canola | cytosol | 11.58 | 20.8 |
| CDY04769 | Canola | nucleus | 10.91 | 20.68 |
| CDX88283 | Canola | nucleus | 12.69 | 20.36 |
| CDY64698 | Canola | nucleus | 11.8 | 20.31 |
| CDX78261 | Canola | nucleus | 11.58 | 20.08 |
| CDY48318 | Canola | nucleus | 16.48 | 19.89 |
| CDX73279 | Canola | cytosol | 10.69 | 19.83 |
| CDY25759 | Canola | nucleus | 10.91 | 19.68 |
| CDY26229 | Canola | nucleus | 16.26 | 19.68 |
| CDX88432 | Canola | nucleus | 12.03 | 19.01 |
| CDX87460 | Canola | nucleus | 12.03 | 18.95 |
| CDX79253 | Canola | nucleus | 11.8 | 18.93 |
| CDX90262 | Canola | nucleus | 16.04 | 18.85 |
| CDY12068 | Canola | nucleus | 14.92 | 18.72 |
| CDX68024 | Canola | nucleus | 11.58 | 18.37 |
| CDY21356 | Canola | nucleus | 11.8 | 18.28 |
| CDY23739 | Canola | nucleus | 15.37 | 18.02 |
| CDY46642 | Canola | nucleus | 11.58 | 17.99 |
| CDX87594 | Canola | nucleus | 12.69 | 17.81 |
| CDY50131 | Canola | nucleus | 15.14 | 17.8 |
| CDY67299 | Canola | nucleus | 14.92 | 17.59 |
| CDY37724 | Canola | nucleus | 12.47 | 17.34 |
| CDX79527 | Canola | nucleus | 15.59 | 17.24 |
| CDY17173 | Canola | nucleus | 14.48 | 17.24 |
| CDY41556 | Canola | nucleus | 11.14 | 17.24 |
| CDY42724 | Canola | cytosol | 14.25 | 16.89 |
| CDY69852 | Canola | cytosol | 14.25 | 16.75 |
| CDX84689 | Canola | nucleus | 14.92 | 16.42 |
| CDY58169 | Canola | cytosol, nucleus, plasma membrane | 14.92 | 16.3 |
| CDY36357 | Canola | nucleus | 19.15 | 15.87 |
| CDX80046 | Canola | nucleus | 11.14 | 15.82 |
| CDY41557 | Canola | nucleus | 11.14 | 15.82 |
| CDY42577 | Canola | nucleus | 19.15 | 15.78 |
| CDY07975 | Canola | nucleus | 16.48 | 15.71 |
| CDX74030 | Canola | nucleus | 16.48 | 15.68 |
| CDY22136 | Canola | nucleus | 16.93 | 15.64 |
| CDY45879 | Canola | cytosol, nucleus, plastid | 12.03 | 15.61 |
| CDY41059 | Canola | nucleus | 14.48 | 15.22 |
| CDY27523 | Canola | nucleus | 10.91 | 15.17 |
| CDY42061 | Canola | cytosol, nucleus, plastid | 12.25 | 15.15 |
| CDX92807 | Canola | nucleus | 15.14 | 15.11 |
| CDY48851 | Canola | cytosol, nucleus, peroxisome | 12.25 | 15.11 |
| CDY11989 | Canola | nucleus | 14.48 | 15.05 |
| CDY48016 | Canola | nucleus | 10.91 | 15.03 |
| CDX74070 | Canola | cytosol | 12.03 | 15.0 |
| CDY00446 | Canola | nucleus | 11.36 | 15.0 |
| CDY08023 | Canola | nucleus | 12.03 | 15.0 |
| CDY35966 | Canola | nucleus | 16.48 | 14.98 |
| CDY46690 | Canola | nucleus | 14.25 | 14.95 |
| CDY67263 | Canola | nucleus | 10.91 | 14.94 |
| CDX94301 | Canola | nucleus | 14.7 | 14.93 |
| CDY66272 | Canola | nucleus | 16.26 | 14.93 |
| CDY44555 | Canola | cytosol, nucleus, plastid | 12.03 | 14.88 |
| CDY17719 | Canola | cytoskeleton, cytosol, nucleus | 13.59 | 14.7 |
| CDY46689 | Canola | nucleus | 15.14 | 14.69 |
| CDX69279 | Canola | nucleus | 7.57 | 14.41 |
| CDY05301 | Canola | nucleus | 11.14 | 14.24 |
| CDX77783 | Canola | nucleus | 13.36 | 14.12 |
| CDY24657 | Canola | nucleus | 10.69 | 14.12 |
| CDY36753 | Canola | nucleus | 13.59 | 14.02 |
| CDX89316 | Canola | endoplasmic reticulum | 13.81 | 13.87 |
| CDY28918 | Canola | mitochondrion | 14.03 | 13.02 |
| CDX69277 | Canola | mitochondrion | 4.9 | 11.83 |
| CDY25957 | Canola | nucleus | 14.48 | 11.75 |
| CDY13339 | Canola | mitochondrion | 3.79 | 10.12 |
| CDY40554 | Canola | nucleus | 14.48 | 9.91 |
| CDY21399 | Canola | mitochondrion | 2.67 | 8.28 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078GPC8 | UniProt:A0A078GPC8 | EnsemblPlants:CDY27186 | ProteinID:CDY27186 |
| ProteinID:CDY27186.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 |
| EnsemblPlantsGene:GSBRNA2T00037054001 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44578 | PANTHER:PTHR44578:SF1 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0004EE0A47 | SEG:seg | : | : | : | : |
Description
BnaA09g36160DBnaA09g36160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPC8]
Coordinates
chrLK032201:+:65780..67800
Molecular Weight (calculated)
47908.1 Da
IEP (calculated)
5.606
GRAVY (calculated)
-0.654
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKRKLEAQ LSEGSEPSEK QIAINNEVKQ EVEYEEVEEE HEDDDDNDEE EEIENRMVVA ATSGSGNLDD DDDEPIQDLL EPFSKEQLLS LLKEAAEKHR
101: DVANRIREVA DEDPVHRKIF VHGLGWDTKT ETLIEAFKEY GEIEDCKAVF DKVSGKSKGY GFILFKSRSG ARNALKQPQK KIGSRMTACQ LASKGPVFGG
201: NNPVAAAGAS IAPAQHSNSE HTQKKIYVSN VGAELDPQKL LAFFSKFGEI EEGPLGLDKY TGRPKGFCLF VYKSAESAKK ALEEPHKSFE GHILHCQKAI
301: DGPKPGKPQQ FNNNPRFQRN DNSGGYGTPT GHGHLMAGNQ AGMGAPVQAM NPAIGQALTA LLASQGGLAF NPAIGQALLG SLGAAGGVNP GAGVGMPTGY
401: GTQPMTPGSI PGYGGQPGLH GGYQTPPPGQ GGAGRGQHGV GHYSSYMGQ
101: DVANRIREVA DEDPVHRKIF VHGLGWDTKT ETLIEAFKEY GEIEDCKAVF DKVSGKSKGY GFILFKSRSG ARNALKQPQK KIGSRMTACQ LASKGPVFGG
201: NNPVAAAGAS IAPAQHSNSE HTQKKIYVSN VGAELDPQKL LAFFSKFGEI EEGPLGLDKY TGRPKGFCLF VYKSAESAKK ALEEPHKSFE GHILHCQKAI
301: DGPKPGKPQQ FNNNPRFQRN DNSGGYGTPT GHGHLMAGNQ AGMGAPVQAM NPAIGQALTA LLASQGGLAF NPAIGQALLG SLGAAGGVNP GAGVGMPTGY
401: GTQPMTPGSI PGYGGQPGLH GGYQTPPPGQ GGAGRGQHGV GHYSSYMGQ
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.