Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | nucleus | 40.09 | 74.46 |
| GSMUA_Achr4P09210_001 | Banana | nucleus | 71.79 | 69.68 |
| Os04t0636900-02 | Rice | nucleus | 43.12 | 35.92 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 43.36 | 35.7 |
| Solyc01g008970.2.1 | Tomato | nucleus | 30.77 | 35.11 |
| EES12939 | Sorghum | nucleus | 42.89 | 34.91 |
| Zm00001d002141_P006 | Maize | nucleus | 41.96 | 34.55 |
| Bra014667.1-P | Field mustard | nucleus | 24.48 | 34.43 |
| GSMUA_Achr5P17700_001 | Banana | cytosol | 7.46 | 34.41 |
| TraesCS2A01G526400.1 | Wheat | nucleus | 40.79 | 34.38 |
| TraesCS2D01G529100.1 | Wheat | nucleus | 40.79 | 34.38 |
| TraesCS2B01G556700.1 | Wheat | nucleus | 40.79 | 34.38 |
| CDX76015 | Canola | nucleus | 24.24 | 34.1 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 32.87 | 34.06 |
| GSMUA_Achr5P09550_001 | Banana | nucleus | 29.37 | 33.87 |
| GSMUA_Achr6P15950_001 | Banana | nucleus | 35.9 | 33.05 |
| CDY06947 | Canola | nucleus | 32.87 | 32.79 |
| CDY57580 | Canola | nucleus | 33.57 | 32.51 |
| AT2G41060.3 | Thale cress | nucleus | 34.03 | 32.37 |
| KRG94993 | Soybean | nucleus | 35.9 | 32.15 |
| Bra016954.1-P | Field mustard | nucleus | 32.87 | 32.05 |
| CDY27186 | Canola | nucleus | 33.33 | 31.85 |
| Bra007277.1-P | Field mustard | nucleus | 33.33 | 31.85 |
| CDX72106 | Canola | nucleus | 33.57 | 31.65 |
| GSMUA_Achr9P12410_001 | Banana | nucleus | 24.71 | 31.64 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 31.7 | 31.34 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 33.8 | 31.32 |
| GSMUA_Achr5P09540_001 | Banana | nucleus | 28.21 | 31.19 |
| KRH66628 | Soybean | nucleus | 34.73 | 30.66 |
| GSMUA_Achr4P09830_001 | Banana | mitochondrion | 10.72 | 30.46 |
| AT3G56860.10 | Thale cress | nucleus | 33.8 | 30.33 |
| KRH14673 | Soybean | nucleus | 34.5 | 29.96 |
| KRH73477 | Soybean | nucleus | 34.27 | 29.64 |
| PGSC0003DMT400058431 | Potato | nucleus | 32.87 | 28.78 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 33.57 | 27.8 |
| GSMUA_Achr3P06540_001 | Banana | nucleus, plastid | 10.26 | 27.67 |
| GSMUA_Achr9P14920_001 | Banana | plastid | 10.72 | 25.99 |
| CDY47382 | Canola | golgi, plastid | 24.71 | 25.48 |
| GSMUA_Achr7P00730_001 | Banana | cytosol | 10.26 | 24.31 |
| HORVU2Hr1G116230.1 | Barley | nucleus | 22.14 | 23.4 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 12.12 | 21.58 |
| GSMUA_Achr9P12880_001 | Banana | cytosol | 11.19 | 20.87 |
| GSMUA_Achr8P24330_001 | Banana | nucleus, plastid | 13.52 | 20.0 |
| GSMUA_Achr4P32300_001 | Banana | nucleus | 6.76 | 19.73 |
| GSMUA_Achr8P23460_001 | Banana | nucleus | 10.72 | 19.49 |
| GSMUA_Achr3P21850_001 | Banana | nucleus | 11.42 | 18.7 |
| GSMUA_Achr5P05400_001 | Banana | mitochondrion | 11.42 | 18.56 |
| GSMUA_Achr8P08440_001 | Banana | nucleus | 11.19 | 18.53 |
| GSMUA_Achr11P... | Banana | nucleus | 11.19 | 18.11 |
| GSMUA_Achr10P... | Banana | nucleus | 11.42 | 18.08 |
| GSMUA_Achr6P17510_001 | Banana | cytosol, mitochondrion, nucleus | 11.19 | 17.78 |
| GSMUA_Achr10P... | Banana | nucleus | 10.26 | 17.74 |
| GSMUA_Achr3P13820_001 | Banana | cytosol | 10.96 | 16.85 |
| GSMUA_Achr7P13480_001 | Banana | nucleus | 12.82 | 16.32 |
| GSMUA_Achr1P19260_001 | Banana | nucleus | 12.82 | 16.27 |
| GSMUA_Achr10P... | Banana | nucleus | 12.59 | 16.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 11.65 | 15.2 |
| GSMUA_Achr2P14710_001 | Banana | cytosol | 11.65 | 13.93 |
| GSMUA_Achr4P33100_001 | Banana | nucleus | 13.99 | 13.57 |
| GSMUA_Achr1P09440_001 | Banana | cytosol | 10.72 | 13.57 |
| GSMUA_Achr8P25380_001 | Banana | nucleus | 11.89 | 13.46 |
| GSMUA_Achr10P... | Banana | nucleus | 13.75 | 12.83 |
| GSMUA_Achr10P... | Banana | nucleus | 13.05 | 12.73 |
| GSMUA_Achr1P10970_001 | Banana | nucleus | 12.35 | 12.16 |
| GSMUA_Achr6P10970_001 | Banana | nucleus | 13.29 | 11.4 |
| GSMUA_Achr4P28100_001 | Banana | nucleus | 11.19 | 10.86 |
| GSMUA_Achr4P24260_001 | Banana | cytosol | 8.16 | 10.64 |
| GSMUA_Achr3P02300_001 | Banana | nucleus | 13.05 | 8.25 |
| GSMUA_Achr6P24180_001 | Banana | cytosol | 11.65 | 7.5 |
| GSMUA_Achr5P17690_001 | Banana | nucleus | 6.29 | 6.68 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP13830_001 | EnsemblPlants:GSMUA_AchrUn_randomT13830_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG13830_001 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | PANTHER:PTHR44578 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000294EC7E | UniProt:M0U8Z2 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13830_001]
Coordinates
chrchrUn_random:+:65433429..65435121
Molecular Weight (calculated)
46553.0 Da
IEP (calculated)
6.624
GRAVY (calculated)
-0.322
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MATKKRKVDQ EDELLSGALN HAADPLSQAH HQPVVYTPAP GSDDDDGGED DDDDVGTLLE PLSRDQLVGL LRTAAASNPA TLAEIRRVAD LDPAHRKLFV
101: HGLGWDTTAE GLRAAFASYG DIDDCRVIVD KASGRSKGYG FVLFRHRSSA RRALRCPQKV IENRMTSCQL ASSGPSAPSD NVSRKIYVGN VHSDVDGGRL
201: LAFFSQYGEI EEGPIGFDRH TGKPKGYALF VYKTVEGALR ALEEPNKNFE GHLLYCQRAT DNKSKAAPIQ TPAAPPNVVS STGTLNGSAG QNPAAFGITP
301: AMITSLNPAF AAAFGAAGSQ QADLQGIMHL QVFKVHQGCR ALQVSRELSQ LLNKEVEVPV LIKELQQGKV QSRGHQPDQW VDMDHFSFIL RPWLFMSFRD
401: HLGFQCLSAL DIEKGFQCNG CLSPATSFI
101: HGLGWDTTAE GLRAAFASYG DIDDCRVIVD KASGRSKGYG FVLFRHRSSA RRALRCPQKV IENRMTSCQL ASSGPSAPSD NVSRKIYVGN VHSDVDGGRL
201: LAFFSQYGEI EEGPIGFDRH TGKPKGYALF VYKTVEGALR ALEEPNKNFE GHLLYCQRAT DNKSKAAPIQ TPAAPPNVVS STGTLNGSAG QNPAAFGITP
301: AMITSLNPAF AAAFGAAGSQ QADLQGIMHL QVFKVHQGCR ALQVSRELSQ LLNKEVEVPV LIKELQQGKV QSRGHQPDQW VDMDHFSFIL RPWLFMSFRD
401: HLGFQCLSAL DIEKGFQCNG CLSPATSFI
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.