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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 2
  • mitochondrion 3
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g008970.2.1 Tomato nucleus 38.02 43.88
KRH66628 Soybean nucleus 47.7 42.59
GSMUA_Achr6P15950_001 Banana nucleus 44.93 41.85
VIT_08s0056g00690.t01 Wine grape nucleus 43.78 41.04
Bra014667.1-P Field mustard nucleus 28.8 40.98
KRG94993 Soybean nucleus 45.16 40.92
CDX76015 Canola nucleus 28.57 40.66
HORVU6Hr1G054690.5 Barley plastid 17.28 39.89
CDX72106 Canola nucleus 41.71 39.78
CDY06947 Canola nucleus 39.17 39.53
CDY27186 Canola nucleus 40.32 38.98
Bra007277.1-P Field mustard nucleus 40.32 38.98
Bra016954.1-P Field mustard nucleus 39.17 38.64
PGSC0003DMT400058431 Potato nucleus 43.55 38.57
KRH14673 Soybean nucleus 43.78 38.46
KRH73477 Soybean nucleus 43.78 38.31
CDY57580 Canola nucleus 38.94 38.15
AT2G41060.3 Thale cress nucleus 39.17 37.69
AT3G56860.10 Thale cress nucleus 41.01 37.24
VIT_06s0009g01180.t01 Wine grape mitochondrion, nucleus, plastid 44.24 37.07
GSMUA_Achr10P... Banana nucleus 19.59 36.8
KXG30578 Sorghum nucleus 31.34 36.56
Os02t0602600-00 Rice nucleus 30.65 34.46
GSMUA_Achr5P09550_001 Banana nucleus 28.11 32.8
GSMUA_AchrUn_... Banana nucleus 31.34 31.7
GSMUA_Achr4P09210_001 Banana nucleus 32.03 31.45
GSMUA_Achr5P09540_001 Banana nucleus 27.88 31.19
GSMUA_Achr5P17700_001 Banana cytosol 6.45 30.11
GSMUA_Achr9P12410_001 Banana nucleus 22.35 28.96
GSMUA_Achr3P06540_001 Banana nucleus, plastid 10.6 28.93
CDY47382 Canola golgi, plastid 26.96 28.12
EES10068 Sorghum nucleus 27.19 27.38
GSMUA_Achr4P09830_001 Banana mitochondrion 9.45 27.15
GSMUA_Achr9P14920_001 Banana plastid 10.83 26.55
GSMUA_Achr7P00730_001 Banana cytosol 9.45 22.65
GSMUA_Achr10P... Banana nucleus 12.67 22.18
GSMUA_Achr9P12880_001 Banana cytosol 10.37 19.57
GSMUA_AchrUn_... Banana mitochondrion 10.83 19.5
GSMUA_Achr3P21850_001 Banana nucleus 11.75 19.47
GSMUA_Achr8P23460_001 Banana nucleus 10.37 19.07
GSMUA_Achr4P32300_001 Banana nucleus 6.45 19.05
GSMUA_Achr7P13480_001 Banana nucleus 14.75 18.99
GSMUA_Achr8P08440_001 Banana nucleus 11.29 18.92
GSMUA_Achr5P05400_001 Banana mitochondrion 11.29 18.56
GSMUA_Achr10P... Banana nucleus 14.06 18.32
GSMUA_AchrUn_... Banana cytosol 13.82 18.24
GSMUA_Achr8P24330_001 Banana nucleus, plastid 11.98 17.93
GSMUA_Achr1P19260_001 Banana nucleus 13.82 17.75
GSMUA_Achr10P... Banana nucleus 11.06 17.71
GSMUA_Achr2P14710_001 Banana cytosol 14.52 17.55
GSMUA_Achr6P17510_001 Banana cytosol, mitochondrion, nucleus 10.83 17.41
GSMUA_Achr11P... Banana nucleus 10.37 16.98
GSMUA_Achr1P09440_001 Banana cytosol 13.13 16.81
GSMUA_Achr10P... Banana nucleus 16.36 16.14
GSMUA_Achr3P13820_001 Banana cytosol 10.37 16.13
GSMUA_Achr4P33100_001 Banana nucleus 16.13 15.84
GSMUA_Achr10P... Banana nucleus 16.59 15.65
GSMUA_Achr4P24260_001 Banana cytosol 11.75 15.5
GSMUA_Achr8P25380_001 Banana nucleus 13.36 15.3
GSMUA_Achr6P10970_001 Banana nucleus 16.59 14.4
GSMUA_Achr1P10970_001 Banana nucleus 13.59 13.53
GSMUA_Achr4P28100_001 Banana nucleus 12.9 12.67
GSMUA_Achr3P02300_001 Banana nucleus 16.36 10.46
GSMUA_Achr5P17690_001 Banana nucleus 9.68 10.4
GSMUA_Achr6P24180_001 Banana cytosol 11.29 7.35
Protein Annotations
EnsemblPlants:GSMUA_Achr10P00440_001EnsemblPlants:GSMUA_Achr10T00440_001EnsemblPlantsGene:GSMUA_Achr10G00440_001Gene3D:3.30.70.330GO:GO:0003674GO:GO:0003676
GO:GO:0003723GO:GO:0005488InterPro:IPR000504InterPro:IPR012677InterPro:Nucleotide-bd_a/b_plait_sfInterPro:RBD_domain_sf
InterPro:RRM_domncoils:CoilPANTHER:PTHR44578PFAM:PF00076PFscan:PS50102SEG:seg
SMART:SM00360SUPFAM:SSF54928UniParc:UPI000295A348UniProt:M0RE71MapMan:35.1:
Description
Putative Heterogeneous nuclear ribonucleoprotein A/B [Source:GMGC_GENE;Acc:GSMUA_Achr10G00440_001]
Coordinates
chr10:-:1004776..1006236
Molecular Weight (calculated)
47375.6 Da
IEP (calculated)
4.330
GRAVY (calculated)
-0.479
Length
434 amino acids
Sequence
(BLAST)
001: MYAYIYILYK KRSPLRKPPV QIPEPSSSEE EEAEEEVEEV EEVEEVEEEG SEEEEEEEEE EEEEVEEEDE AQDQEEEKKA KSEEKEEQVE VEEADVLDRE
101: SIRKLLEPFG KDQLIELLKE AALRNPSLLS QIASAADSDP VHRKIFVHGL GWDATTEVLA AAFTTYGVID ECKVVTDRAT GRCKGYGFVL FRTRAAAQRA
201: LLEPQKKIGN RMTSCQLASF GPPGAQGPAP EVTGRKIFVS NIGEHVNPER LRAFFAKFGE IEEGPLGYDK TTGKLRGFAI FVYKTVEGCR KALEEPKKFF
301: EGCELSCQRA VEGLKPKNQA IGGANVPAML QPNDLALTYA SQSLMGLNPV AGLVGQSLNP AVGLLGQNVG VGVLNQGGTG VNSISPSVIG SYQSQVALQG
401: LGAYQNSYLS SSTGVRSKSD IGSLGNGLPP YFGR
Best Arabidopsis Sequence Match ( AT3G56860.9 )
(BLAST)
001: MTKKRKLEGE ESNEAEEPSQ KLKQTPEEEQ QLVIKNQDNQ GDVEEVEYEE VEEEQEEEVE DDDDEDDGDE NEDQTDGNRI EAAATSGSGN QEDDDDEPIQ
101: DLLEPFSKEQ VLSLLKEAAE KHVDVANRIR EVADEDPVHR KIFVHGLGWD TKTETLIEAF KQYGEIEDCK AVFDKISGKS KGYGFILYKS RSGARNALKQ
201: PQKKIGSRMT ACQLASKGPV FGGAPIAAAA VSAPAQHSNS EHTQKKIYVS NVGAELDPQK LLMFFSKFGE IEEGPLGLDK YTGRPKGFCL FVYKSSESAK
301: RALEEPHKTF EGHILHCQKA IDGPKPGKQQ QHHHNPHAYN NPRYQRNDNN GYGPPGGHGH LMAGNPAGMG GPTAQVINPA IGQALTALLA SQGAGLAFNP
401: AIGQALLGSL GTAAGVNPGN GVGMPTGYGT QAMAPGTMPG YGTQPGLQGG YQTPQPGQGG TSRGQHGVGP YGTPYMGH
Arabidopsis Description
UBA2AUBP1-associated protein 2A [Source:UniProtKB/Swiss-Prot;Acc:Q9LES2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.