Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0602600-00 | Rice | nucleus | 59.68 | 57.51 |
| HORVU6Hr1G054690.5 | Barley | plastid | 27.15 | 53.72 |
| OQU90054 | Sorghum | cytosol, mitochondrion, nucleus | 7.53 | 35.44 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 36.56 | 31.34 |
| EES10068 | Sorghum | nucleus | 35.22 | 30.39 |
| Solyc01g008970.2.1 | Tomato | nucleus | 30.38 | 30.05 |
| CDX76015 | Canola | nucleus | 22.31 | 27.21 |
| CDY06947 | Canola | nucleus | 30.91 | 26.74 |
| Bra014667.1-P | Field mustard | nucleus | 21.77 | 26.56 |
| CDY57580 | Canola | nucleus | 31.45 | 26.41 |
| CDX72106 | Canola | nucleus | 31.99 | 26.15 |
| Bra016954.1-P | Field mustard | nucleus | 30.65 | 25.91 |
| EES03272 | Sorghum | nucleus | 30.91 | 25.84 |
| Bra007277.1-P | Field mustard | nucleus | 31.18 | 25.84 |
| CDY27186 | Canola | nucleus | 31.18 | 25.84 |
| AT2G41060.3 | Thale cress | nucleus | 31.18 | 25.72 |
| KRH66628 | Soybean | nucleus | 33.6 | 25.72 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 31.99 | 25.7 |
| EES02736 | Sorghum | plastid | 31.72 | 25.43 |
| KRG94993 | Soybean | nucleus | 32.53 | 25.26 |
| AT3G56860.10 | Thale cress | nucleus | 31.72 | 24.69 |
| PGSC0003DMT400058431 | Potato | nucleus | 32.26 | 24.49 |
| VIT_06s0009g01180.t01 | Wine grape | mitochondrion, nucleus, plastid | 32.26 | 23.17 |
| EES12939 | Sorghum | nucleus | 32.8 | 23.15 |
| KRH14673 | Soybean | nucleus | 29.84 | 22.47 |
| KRH73477 | Soybean | nucleus | 29.57 | 22.18 |
| CDY47382 | Canola | golgi, plastid | 21.51 | 19.23 |
| EES01849 | Sorghum | nucleus | 11.29 | 16.03 |
| EER90058 | Sorghum | plastid | 12.1 | 15.73 |
| OQU85520 | Sorghum | nucleus, plastid | 12.1 | 15.25 |
| KXG30724 | Sorghum | plastid | 12.1 | 14.52 |
| EES06526 | Sorghum | nucleus | 15.05 | 14.32 |
| EES01076 | Sorghum | nucleus | 13.17 | 14.04 |
| EER88542 | Sorghum | nucleus | 15.59 | 14.01 |
| OQU76075 | Sorghum | plastid | 13.17 | 13.88 |
| EER98147 | Sorghum | nucleus | 15.86 | 13.02 |
| EES02078 | Sorghum | nucleus | 11.83 | 13.02 |
| EER96020 | Sorghum | nucleus | 15.86 | 12.97 |
| KXG37469 | Sorghum | cytosol | 10.48 | 12.87 |
| EER95048 | Sorghum | cytosol, nucleus, plastid | 10.48 | 12.58 |
| KXG34100 | Sorghum | cytosol | 12.1 | 12.5 |
| EER95824 | Sorghum | cytosol | 12.1 | 11.81 |
| EER97452 | Sorghum | nucleus | 14.52 | 11.46 |
| OQU83904 | Sorghum | nucleus | 13.44 | 11.11 |
| KXG38359 | Sorghum | nucleus | 12.9 | 10.6 |
| OQU81002 | Sorghum | nucleus | 9.41 | 10.45 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | UniProt:A0A194YQS0 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | EnsemblPlants:KXG30578 | ProteinID:KXG30578 | ProteinID:KXG30578.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44678 | PANTHER:PTHR44678:SF1 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | EnsemblPlantsGene:SORBI_3004G206500 | SUPFAM:SSF54928 | UniParc:UPI0007F29C6B | SEG:seg |
Description
hypothetical protein
Coordinates
chr4:+:55713261..55714906
Molecular Weight (calculated)
39385.6 Da
IEP (calculated)
7.611
GRAVY (calculated)
-0.320
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKRPRKV QPEAERVDPE PVGGEVDDDS TTMNPPKAEI SAAVECEEVS EADEEDIGRL LEPFTRDELL DLLTDACLRD PALLARVAAS AVSDAAHRRI
101: FVHGLGPGAT SAALAAAFVP FGALDECHAV ADRATGRCRG YGFVTFRRRS DACRALADSS KRVDGRPVAC QLASLGPAAP ASSFSDRKLF VDNVPERAGR
201: DDLRELFSKF GEIEEGPLGS DRATGLFRGY AIFVYKTPEG LRKALDEPTK VFDGCELHCR LAHRARKRKR KQAPAAPADN GEQGNGAAVT LPTVQSEDTA
301: LTPKLPLVCS NPQIRLTTKG SSSATATATV AFRRNAATAG GAGILGAPPV VTCVTSLPVQ STTRPPPSGG VC
101: FVHGLGPGAT SAALAAAFVP FGALDECHAV ADRATGRCRG YGFVTFRRRS DACRALADSS KRVDGRPVAC QLASLGPAAP ASSFSDRKLF VDNVPERAGR
201: DDLRELFSKF GEIEEGPLGS DRATGLFRGY AIFVYKTPEG LRKALDEPTK VFDGCELHCR LAHRARKRKR KQAPAAPADN GEQGNGAAVT LPTVQSEDTA
301: LTPKLPLVCS NPQIRLTTKG SSSATATATV AFRRNAATAG GAGILGAPPV VTCVTSLPVQ STTRPPPSGG VC
001: MTKKRKLESE SNETSEPTEK QQQQCEKEDP EIRNVDNQRD DDEQVVEQDT LKEMHEEEAK GEDNIEAETS SGSGNQGNED DDEEEPIEDL LEPFSKDQLL
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
Arabidopsis Description
UBA2BUBP1-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:O80678]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.