Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66628 | Soybean | nucleus | 90.19 | 88.89 |
| VIT_08s0056g00690.t01 | Wine grape | nucleus | 61.59 | 63.71 |
| Bra007277.1-P | Field mustard | nucleus | 57.41 | 61.25 |
| CDY27186 | Canola | nucleus | 57.2 | 61.02 |
| CDX72106 | Canola | nucleus | 57.83 | 60.88 |
| CDX76015 | Canola | nucleus | 37.16 | 58.36 |
| AT2G41060.3 | Thale cress | nucleus | 54.91 | 58.31 |
| AT3G56860.10 | Thale cress | nucleus | 57.41 | 57.53 |
| Bra014667.1-P | Field mustard | nucleus | 36.12 | 56.72 |
| CDY06947 | Canola | nucleus | 49.69 | 55.35 |
| CDY57580 | Canola | nucleus | 50.1 | 54.18 |
| GSMUA_Achr6P15950_001 | Banana | nucleus | 52.61 | 54.08 |
| Bra016954.1-P | Field mustard | nucleus | 49.48 | 53.86 |
| KRH14673 | Soybean | nucleus | 50.94 | 49.39 |
| Zm00001d040344_P001 | Maize | extracellular, plasma membrane | 46.56 | 49.12 |
| TraesCS3B01G211700.1 | Wheat | nucleus | 46.35 | 49.01 |
| TraesCS3D01G186500.1 | Wheat | nucleus | 49.06 | 48.96 |
| KRH73477 | Soybean | nucleus | 50.1 | 48.39 |
| TraesCS3A01G181900.1 | Wheat | nucleus | 48.43 | 48.33 |
| HORVU3Hr1G037280.1 | Barley | nucleus, plastid | 48.64 | 47.75 |
| EES02736 | Sorghum | plastid | 45.93 | 47.41 |
| Os01t0265800-01 | Rice | nucleus | 48.23 | 47.14 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 40.92 | 45.16 |
| CDY47382 | Canola | golgi, plastid | 36.33 | 41.83 |
| GSMUA_Achr10P... | Banana | nucleus | 18.37 | 38.1 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.15 | 35.9 |
| HORVU2Hr1G116150.4 | Barley | nucleus | 30.48 | 35.27 |
| GSMUA_Achr4P09210_001 | Banana | nucleus | 31.73 | 34.39 |
| HORVU6Hr1G054690.5 | Barley | plastid | 13.15 | 33.51 |
| TraesCS2D01G529100.1 | Wheat | nucleus | 35.49 | 33.4 |
| TraesCS2B01G556700.1 | Wheat | nucleus | 35.49 | 33.4 |
| Os04t0636900-02 | Rice | nucleus | 35.91 | 33.4 |
| KRH55109 | Soybean | nucleus | 30.9 | 33.33 |
| TraesCS2A01G526400.1 | Wheat | nucleus | 35.28 | 33.2 |
| KRH50169 | Soybean | nucleus | 26.51 | 33.07 |
| KRH26210 | Soybean | nucleus | 30.06 | 32.95 |
| EES12939 | Sorghum | nucleus | 36.12 | 32.83 |
| KRH71299 | Soybean | nucleus | 26.3 | 32.81 |
| KXG30578 | Sorghum | nucleus | 25.26 | 32.53 |
| Zm00001d026397_P001 | Maize | nucleus, plasma membrane | 35.07 | 32.25 |
| Os02t0602600-00 | Rice | nucleus | 25.89 | 32.12 |
| Zm00001d002141_P006 | Maize | nucleus | 34.86 | 32.05 |
| KRH75298 | Soybean | cytosol, nucleus | 6.47 | 31.31 |
| KRH13261 | Soybean | cytosol | 7.93 | 30.65 |
| KRG95365 | Soybean | nucleus | 20.25 | 28.87 |
| EES10068 | Sorghum | nucleus | 25.89 | 28.77 |
| KRH67043 | Soybean | nucleus | 20.25 | 28.53 |
| HORVU2Hr1G116230.1 | Barley | nucleus | 22.13 | 26.11 |
| KRH07772 | Soybean | cytosol | 5.22 | 25.51 |
| KRH56541 | Soybean | nucleus | 9.81 | 23.5 |
| KRH17717 | Soybean | nucleus | 17.12 | 23.3 |
| KRH62942 | Soybean | mitochondrion | 9.39 | 22.06 |
| KRH64318 | Soybean | nucleus | 11.27 | 21.01 |
| KRH51553 | Soybean | nucleus, plastid | 12.53 | 20.98 |
| KRH60871 | Soybean | nucleus, plastid | 12.53 | 20.98 |
| KRH53608 | Soybean | nucleus | 10.44 | 20.33 |
| KRH23771 | Soybean | nucleus | 11.48 | 20.22 |
| KRG94084 | Soybean | nucleus | 15.66 | 20.05 |
| KRH07154 | Soybean | nucleus | 15.45 | 19.89 |
| KRH40033 | Soybean | nucleus | 11.27 | 19.85 |
| KRH06384 | Soybean | nucleus | 12.11 | 19.27 |
| KRH47819 | Soybean | nucleus | 11.9 | 19.26 |
| KRH18921 | Soybean | nucleus | 11.06 | 19.2 |
| KRH06373 | Soybean | nucleus | 11.06 | 19.13 |
| KRG93213 | Soybean | nucleus | 15.03 | 19.1 |
| KRH16743 | Soybean | nucleus | 10.86 | 18.98 |
| KRH47808 | Soybean | nucleus | 11.27 | 18.88 |
| KRH62327 | Soybean | nucleus | 11.27 | 18.82 |
| KRH23293 | Soybean | nucleus | 13.57 | 18.41 |
| KRH53044 | Soybean | nucleus | 10.86 | 18.12 |
| KRH06306 | Soybean | nucleus | 10.02 | 17.84 |
| KRH28467 | Soybean | cytosol | 13.57 | 17.81 |
| KRH47731 | Soybean | nucleus | 9.81 | 17.6 |
| KRH77004 | Soybean | nucleus | 12.94 | 17.13 |
| KRH61448 | Soybean | nucleus | 13.57 | 16.93 |
| KRH14284 | Soybean | nucleus | 16.49 | 16.53 |
| KRH46297 | Soybean | nucleus | 16.49 | 16.49 |
| KRH73860 | Soybean | nucleus | 16.08 | 16.14 |
| KRH52137 | Soybean | nucleus | 12.73 | 16.14 |
| KRG98573 | Soybean | nucleus | 15.87 | 15.87 |
| KRH74025 | Soybean | nucleus | 15.66 | 15.79 |
| KRH14098 | Soybean | nucleus | 15.45 | 15.45 |
| KRG92276 | Soybean | endoplasmic reticulum | 14.4 | 14.5 |
| KRH34534 | Soybean | nucleus | 14.2 | 14.44 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 9.39 | 13.89 |
Protein Annotations
| EntrezGene:100784200 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02012068 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G122900 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 |
| UniProt:K7MY09 | EnsemblPlants:KRG94993 | ProteinID:KRG94993 | ProteinID:KRG94993.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFscan:PS50102 | PANTHER:PTHR44578 | PANTHER:PTHR44578:SF2 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000233E479 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:38106688..38113342
Molecular Weight (calculated)
51186.5 Da
IEP (calculated)
4.756
GRAVY (calculated)
-0.677
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKRKVAPK SSVSAEPPLK QHQPKPENAA QEYEEEVEEE VEEEEVEEEV EEEEEEEEDE EDEEEEEEDQ KDQYQHQQQQ QDEDDDPISK LLEPLSKDQL
101: LILLCEAAAK HQDVAERIRR AADEDPVHRK IFVHGLGWDT TAGTLISSFR QYGEIEDCKA VTDKVSGKSK GYGFILFKTR RGARNALKEP QKKIGNRMTA
201: CQLASIGPVS NPPQTAPPAV AAPSSSVSEY TQKKIYVSNV GADLDPQKLL AFFSRFGEIE EGPLGLDKAT GKPKGFCLFV YRSPESARRA LEEPHKDFEG
301: HILHCQKAID GPKAGKLQQH GNVNAQAQRA QFQRNGSVGT NAAAGYGGGA ALQPGHLMAP AGPGIGFNQS AAAAQAALNP AMAQALTALL ASQGTLGLTN
401: LLGSIGTSAA VNPGVPSAGA AVQGGYSAQP NISPGVVGGY GNQVGLQLAY PNQNQNQQIG QGGSGRGQYG GGSAPYMGH
101: LILLCEAAAK HQDVAERIRR AADEDPVHRK IFVHGLGWDT TAGTLISSFR QYGEIEDCKA VTDKVSGKSK GYGFILFKTR RGARNALKEP QKKIGNRMTA
201: CQLASIGPVS NPPQTAPPAV AAPSSSVSEY TQKKIYVSNV GADLDPQKLL AFFSRFGEIE EGPLGLDKAT GKPKGFCLFV YRSPESARRA LEEPHKDFEG
301: HILHCQKAID GPKAGKLQQH GNVNAQAQRA QFQRNGSVGT NAAAGYGGGA ALQPGHLMAP AGPGIGFNQS AAAAQAALNP AMAQALTALL ASQGTLGLTN
401: LLGSIGTSAA VNPGVPSAGA AVQGGYSAQP NISPGVVGGY GNQVGLQLAY PNQNQNQQIG QGGSGRGQYG GGSAPYMGH
001: MTKKRKLESE SNETSEPTEK QQQQCEKEDP EIRNVDNQRD DDEQVVEQDT LKEMHEEEAK GEDNIEAETS SGSGNQGNED DDEEEPIEDL LEPFSKDQLL
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
101: ILLKEAAERH RDVANRIRIV ADEDLVHRKI FVHGLGWDTK ADSLIDAFKQ YGEIEDCKCV VDKVSGQSKG YGFILFKSRS GARNALKQPQ KKIGTRMTAC
201: QLASIGPVQG NPVVAPAQHF NPENVQRKIY VSNVSADIDP QKLLEFFSRF GEIEEGPLGL DKATGRPKGF ALFVYRSLES AKKALEEPHK TFEGHVLHCH
301: KANDGPKQVK QHQHNHNSHN QNSRYQRNDN NGYGAPGGHG HFIAGNNQAV QAFNPAIGQA LTALLASQGA GLGLNQAFGQ ALLGTLGTAS PGAVGGMPSG
401: YGTQANISPG VYPGYGAQAG YQGGYQTQQP GQGGAGRGQH GAGYGGPYMG R
Arabidopsis Description
UBA2BUBP1-associated protein 2B [Source:UniProtKB/Swiss-Prot;Acc:O80678]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.