Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67043 | Soybean | nucleus | 92.26 | 91.18 |
| VIT_08s0007g06300.t01 | Wine grape | nucleus | 69.05 | 67.84 |
| GSMUA_Achr9P12410_001 | Banana | nucleus | 61.9 | 62.09 |
| KRH75298 | Soybean | cytosol, nucleus | 10.42 | 35.35 |
| KRH13261 | Soybean | cytosol | 12.8 | 34.68 |
| KRH50169 | Soybean | nucleus | 33.63 | 29.43 |
| KRH71299 | Soybean | nucleus | 33.63 | 29.43 |
| KRH07772 | Soybean | cytosol | 8.04 | 27.55 |
| KRH26210 | Soybean | nucleus | 35.71 | 27.46 |
| KRH55109 | Soybean | nucleus | 35.42 | 26.8 |
| KRH56541 | Soybean | nucleus | 14.58 | 24.5 |
| KRH60871 | Soybean | nucleus, plastid | 18.15 | 21.33 |
| KRH40033 | Soybean | nucleus | 17.26 | 21.32 |
| KRH62942 | Soybean | mitochondrion | 12.8 | 21.08 |
| KRH64318 | Soybean | nucleus | 16.07 | 21.01 |
| KRH51553 | Soybean | nucleus, plastid | 17.86 | 20.98 |
| KRH23771 | Soybean | nucleus | 16.96 | 20.96 |
| KRH66628 | Soybean | nucleus | 30.06 | 20.78 |
| KRG94993 | Soybean | nucleus | 28.87 | 20.25 |
| KRH16743 | Soybean | nucleus | 16.37 | 20.07 |
| KRH53608 | Soybean | nucleus | 14.58 | 19.92 |
| KRH18921 | Soybean | nucleus | 16.07 | 19.57 |
| KRH73477 | Soybean | nucleus | 28.57 | 19.35 |
| KRH14673 | Soybean | nucleus | 28.27 | 19.23 |
| KRH62327 | Soybean | nucleus | 16.37 | 19.16 |
| KRH53044 | Soybean | nucleus | 16.07 | 18.82 |
| KRH47731 | Soybean | nucleus | 14.88 | 18.73 |
| KRH06306 | Soybean | nucleus | 14.88 | 18.59 |
| KRH06373 | Soybean | nucleus | 15.18 | 18.41 |
| KRH47819 | Soybean | nucleus | 16.07 | 18.24 |
| KRH17717 | Soybean | nucleus | 19.05 | 18.18 |
| KRH06384 | Soybean | nucleus | 16.07 | 17.94 |
| KRH47808 | Soybean | nucleus | 14.88 | 17.48 |
| KRH07154 | Soybean | nucleus | 19.35 | 17.47 |
| KRG94084 | Soybean | nucleus | 19.35 | 17.38 |
| KRG93213 | Soybean | nucleus | 19.35 | 17.24 |
| KRH23293 | Soybean | nucleus | 17.56 | 16.71 |
| KRH52137 | Soybean | nucleus | 16.96 | 15.08 |
| KRH61448 | Soybean | nucleus | 16.96 | 14.84 |
| KRG98573 | Soybean | nucleus | 20.83 | 14.61 |
| KRG92276 | Soybean | endoplasmic reticulum | 20.54 | 14.5 |
| KRH34534 | Soybean | nucleus | 20.24 | 14.44 |
| KRH46297 | Soybean | nucleus | 20.54 | 14.4 |
| KRH74025 | Soybean | nucleus | 19.94 | 14.11 |
| KRH14098 | Soybean | nucleus | 19.94 | 13.99 |
| KRH73860 | Soybean | nucleus | 19.64 | 13.84 |
| KRH14284 | Soybean | nucleus | 19.64 | 13.81 |
| KRH28467 | Soybean | cytosol | 14.88 | 13.7 |
| KRH77004 | Soybean | nucleus | 14.29 | 13.26 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 12.5 | 12.96 |
Protein Annotations
| EntrezGene:100802911 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02012103 | EnsemblPlantsGene:GLYMA_19G146400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1N972 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRG95365 | ProteinID:KRG95365 | ProteinID:KRG95365.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44678 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000233EB9A |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:40725049..40729149
Molecular Weight (calculated)
36604.6 Da
IEP (calculated)
7.639
GRAVY (calculated)
-0.449
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLKKRKLE LDEAGNGELA SKEELRFLIE PLAKPQLVDL LAKLGSQYPS IAEEIKSIAS ADPAHRKLFV RGLAWNTTSE TLRAAFQEHG EIEEGAVIFD
101: KVTGKSRGYG FITFKNMEST QQALRAPSKL IDGRLAVCNL ACESLSGTSS APDLSLRKLY IGSLSPEVTS EILLNYFARH GEIEEGSVAY DRDTNESRGF
201: GFVTYKTAEA AKKAIDDVEK MLGGRNIVVK YADSHKGKTG QPPFPSGVVP MAPLPMNPGY MQPGKGHVGS GPPINYSYPQ TVAPYSASPY PNPPPTAPSL
301: YPIQWQIPYP QVSAKKDQHG DPPAAVGMNP YYYPKQ
101: KVTGKSRGYG FITFKNMEST QQALRAPSKL IDGRLAVCNL ACESLSGTSS APDLSLRKLY IGSLSPEVTS EILLNYFARH GEIEEGSVAY DRDTNESRGF
201: GFVTYKTAEA AKKAIDDVEK MLGGRNIVVK YADSHKGKTG QPPFPSGVVP MAPLPMNPGY MQPGKGHVGS GPPINYSYPQ TVAPYSASPY PNPPPTAPSL
301: YPIQWQIPYP QVSAKKDQHG DPPAAVGMNP YYYPKQ
001: MDMMKKRKLD ENGNGLNTNG GGTIGPTRLS PQDARKIIER FTTDQLLDLL QEAIVRHPDV LESVRLTADS DISQRKLFIR GLAADTTTEG LRSLFSSYGD
101: LEEAIVILDK VTGKSKGYGF VTFMHVDGAL LALKEPSKKI DGRVTVTQLA ASGNQGTGSQ IADISMRKIY VANVPFDMPA DRLLNHFMAY GDVEEGPLGF
201: DKVTGKSRGF ALFVYKTAEG AQAALADPVK VIDGKHLNCK LAVDGKKGGK PGMPQAQDGG SGHGHVHGEG MGMVRPAGPY GAAGGISAYG GYSGGPPAHH
301: MNSTHSSMGV GSAGYGGHYG GYGGPGGTGV YGGLGGGYGG PGTGSGQYRM PPSSMPGGGG YPESGHYGLS SSAGYPGQHH QAVGTSPVPR VPHGGMYPNG
401: PPNY
101: LEEAIVILDK VTGKSKGYGF VTFMHVDGAL LALKEPSKKI DGRVTVTQLA ASGNQGTGSQ IADISMRKIY VANVPFDMPA DRLLNHFMAY GDVEEGPLGF
201: DKVTGKSRGF ALFVYKTAEG AQAALADPVK VIDGKHLNCK LAVDGKKGGK PGMPQAQDGG SGHGHVHGEG MGMVRPAGPY GAAGGISAYG GYSGGPPAHH
301: MNSTHSSMGV GSAGYGGHYG GYGGPGGTGV YGGLGGGYGG PGTGSGQYRM PPSSMPGGGG YPESGHYGLS SSAGYPGQHH QAVGTSPVPR VPHGGMYPNG
401: PPNY
Arabidopsis Description
UBA2CUBP1-associated protein 2C [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.