Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73860 | Soybean | nucleus | 95.4 | 95.6 |
| KRH46297 | Soybean | nucleus | 82.85 | 82.67 |
| KRG98573 | Soybean | nucleus | 81.8 | 81.63 |
| VIT_19s0090g01660.t01 | Wine grape | nucleus | 72.18 | 72.18 |
| PGSC0003DMT400037271 | Potato | nucleus | 65.06 | 66.17 |
| PGSC0003DMT400076643 | Potato | nucleus | 64.85 | 65.4 |
| Solyc10g006050.2.1 | Tomato | nucleus | 58.79 | 64.9 |
| Solyc12g014600.1.1 | Tomato | nucleus | 58.58 | 64.07 |
| GSMUA_Achr10P... | Banana | nucleus | 58.37 | 63.41 |
| KRH74025 | Soybean | nucleus | 62.97 | 63.37 |
| KRH14098 | Soybean | nucleus | 63.18 | 63.05 |
| GSMUA_Achr10P... | Banana | nucleus | 57.95 | 60.22 |
| AT4G26650.1 | Thale cress | nucleus | 55.65 | 58.46 |
| TraesCS4D01G152200.1 | Wheat | nucleus | 56.49 | 58.32 |
| Os11t0637700-01 | Rice | plasma membrane | 56.9 | 58.24 |
| KRH07772 | Soybean | cytosol | 11.92 | 58.16 |
| TraesCS4A01G150600.1 | Wheat | nucleus | 56.28 | 58.1 |
| HORVU0Hr1G008280.1 | Barley | nucleus | 56.28 | 58.1 |
| GSMUA_Achr6P10970_001 | Banana | nucleus | 60.67 | 58.0 |
| TraesCSU01G068500.1 | Wheat | nucleus | 56.07 | 57.88 |
| Bra028973.1-P | Field mustard | nucleus | 52.3 | 57.74 |
| CDY11989 | Canola | nucleus | 51.88 | 57.41 |
| CDX94301 | Canola | nucleus | 52.72 | 57.01 |
| CDX92807 | Canola | nucleus | 53.56 | 56.89 |
| CDY36753 | Canola | nucleus | 51.26 | 56.32 |
| GSMUA_Achr4P33100_001 | Banana | nucleus | 51.88 | 56.11 |
| CDX89316 | Canola | endoplasmic reticulum | 51.67 | 55.26 |
| Os07t0584500-01 | Rice | nucleus | 54.39 | 55.08 |
| Bra026413.1-P | Field mustard | nucleus | 48.74 | 55.08 |
| Bra019094.1-P | Field mustard | nucleus | 53.14 | 54.86 |
| CDY46689 | Canola | nucleus | 53.14 | 54.86 |
| TraesCS2B01G216600.2 | Wheat | cytosol | 53.77 | 54.56 |
| TraesCS2D01G197500.2 | Wheat | nucleus | 53.35 | 54.26 |
| CDY46690 | Canola | nucleus | 48.54 | 54.21 |
| EER97452 | Sorghum | nucleus | 53.35 | 54.14 |
| Zm00001d007772_P001 | Maize | nucleus | 50.0 | 53.23 |
| EER98147 | Sorghum | nucleus | 50.42 | 53.2 |
| Zm00001d019079_P001 | Maize | cytosol | 49.79 | 53.12 |
| EER96020 | Sorghum | nucleus | 50.42 | 52.97 |
| Zm00001d019084_P002 | Maize | nucleus | 48.95 | 51.54 |
| Zm00001d006704_P002 | Maize | nucleus | 51.88 | 51.24 |
| AT5G55550.10 | Thale cress | nucleus | 53.77 | 50.69 |
| TraesCS2A01G190400.1 | Wheat | plastid | 53.14 | 47.83 |
| Zm00001d019086_P001 | Maize | nucleus | 51.46 | 46.24 |
| OQU83904 | Sorghum | nucleus | 43.51 | 46.22 |
| Zm00001d021950_P007 | Maize | endoplasmic reticulum, nucleus | 52.3 | 46.21 |
| KRH56541 | Soybean | nucleus | 17.36 | 41.5 |
| KRH34534 | Soybean | nucleus | 39.96 | 40.55 |
| KRG92276 | Soybean | endoplasmic reticulum | 40.17 | 40.34 |
| GSMUA_Achr3P02300_001 | Banana | nucleus | 57.11 | 40.21 |
| KRH07154 | Soybean | nucleus | 29.08 | 37.37 |
| KRH17717 | Soybean | nucleus | 27.41 | 37.22 |
| KRG94084 | Soybean | nucleus | 28.87 | 36.9 |
| KRH75298 | Soybean | cytosol, nucleus | 7.11 | 34.34 |
| KRH52137 | Soybean | nucleus | 26.78 | 33.86 |
| KRG93213 | Soybean | nucleus | 26.57 | 33.69 |
| KRH61448 | Soybean | nucleus | 26.99 | 33.59 |
| KRH23293 | Soybean | nucleus | 24.69 | 33.43 |
| KRH13261 | Soybean | cytosol | 8.37 | 32.26 |
| KRH28467 | Soybean | cytosol | 22.59 | 29.59 |
| KRH77004 | Soybean | nucleus | 22.38 | 29.56 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 17.78 | 26.23 |
| KRH23771 | Soybean | nucleus | 13.6 | 23.9 |
| KRH40033 | Soybean | nucleus | 13.39 | 23.53 |
| KRH62942 | Soybean | mitochondrion | 9.41 | 22.06 |
| KRH60871 | Soybean | nucleus, plastid | 13.18 | 22.03 |
| KRH51553 | Soybean | nucleus, plastid | 13.18 | 22.03 |
| KRH64318 | Soybean | nucleus | 11.51 | 21.4 |
| KRH53608 | Soybean | nucleus | 10.88 | 21.14 |
| KRH26210 | Soybean | nucleus | 18.62 | 20.37 |
| KRH16743 | Soybean | nucleus | 11.51 | 20.07 |
| KRH71299 | Soybean | nucleus | 16.11 | 20.05 |
| KRH06384 | Soybean | nucleus | 12.55 | 19.93 |
| KRH18921 | Soybean | nucleus | 11.51 | 19.93 |
| KRH55109 | Soybean | nucleus | 18.41 | 19.82 |
| KRH06306 | Soybean | nucleus | 11.09 | 19.7 |
| KRG95365 | Soybean | nucleus | 13.81 | 19.64 |
| KRH47819 | Soybean | nucleus | 12.13 | 19.59 |
| KRH50169 | Soybean | nucleus | 15.69 | 19.53 |
| KRH67043 | Soybean | nucleus | 13.6 | 19.12 |
| KRH47731 | Soybean | nucleus | 10.67 | 19.1 |
| KRH47808 | Soybean | nucleus | 10.46 | 17.48 |
| KRH62327 | Soybean | nucleus | 10.46 | 17.42 |
| KRH73477 | Soybean | nucleus | 17.99 | 17.34 |
| KRH53044 | Soybean | nucleus | 10.25 | 17.07 |
| KRH14673 | Soybean | nucleus | 17.57 | 17.0 |
| KRH06373 | Soybean | nucleus | 9.83 | 16.97 |
| KRG94993 | Soybean | nucleus | 16.53 | 16.49 |
| KRH66628 | Soybean | nucleus | 16.11 | 15.84 |
Protein Annotations
| EntrezGene:100788515 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02008496 | InterPro:DAZAP1_RRM2 | EnsemblPlantsGene:GLYMA_14G016600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1M6J9 | InterPro:IPR000504 |
| InterPro:IPR012677 | EnsemblPlants:KRH14284 | ProteinID:KRH14284 | ProteinID:KRH14284.1 | ProteinID:KRH14285.1 | ProteinID:KRH14286.1 |
| ProteinID:KRH14287.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44291 | PANTHER:PTHR44291:SF1 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000233AB48 | SEG:seg |
Description
hypothetical protein
Coordinates
chr14:+:1188616..1192843
Molecular Weight (calculated)
50440.1 Da
IEP (calculated)
8.457
GRAVY (calculated)
-0.515
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDLGKLFI GGISWDTDDE RLKEYFGKYG EVIEAVIMRD RTTGRARGFG FVVFADPSAA ERVIMDKHII DGRTVEAKKA VPRDDQQTIN RQSGSIHGSP
101: SPGRTKKIFV GGLPSTITES DFKKYFDQFG TIADVVVMYD HNTQRPRGFG FITYDSEEAV DRVLYKTFHE LNGKMVEVKR AVPKELSPGP TRSPLIGYNY
201: GLNRTSGFLN SYAQGFNMNP IGGYGVRMDG RFSPLTSARS GFSPFGSSGY GMGVNLDLGL NPSYGGTSSY GGSLGYARMS PFNNGNSNRY TTPIGNSGGN
301: GRSDSLMNSA SRSVWGNGGQ NNAANSPVSP GAYLGSGSGA FGVSIGNGGT NWGPSVPTQG GGAATGYSTW GNSYDGGDNN ISLGGGGYGR NSSPSVPQSS
401: TFTAPTGDYE GSYGNLYRNG SVYSDSTWRS AASEIDASGS FGYGGLGGIA SDDPVKSSDG FIGNYNVISR QTNRGIAA
101: SPGRTKKIFV GGLPSTITES DFKKYFDQFG TIADVVVMYD HNTQRPRGFG FITYDSEEAV DRVLYKTFHE LNGKMVEVKR AVPKELSPGP TRSPLIGYNY
201: GLNRTSGFLN SYAQGFNMNP IGGYGVRMDG RFSPLTSARS GFSPFGSSGY GMGVNLDLGL NPSYGGTSSY GGSLGYARMS PFNNGNSNRY TTPIGNSGGN
301: GRSDSLMNSA SRSVWGNGGQ NNAANSPVSP GAYLGSGSGA FGVSIGNGGT NWGPSVPTQG GGAATGYSTW GNSYDGGDNN ISLGGGGYGR NSSPSVPQSS
401: TFTAPTGDYE GSYGNLYRNG SVYSDSTWRS AASEIDASGS FGYGGLGGIA SDDPVKSSDG FIGNYNVISR QTNRGIAA
001: MEQKMESASD LGKLFIGGIS WDTDEERLQE YFGKYGDLVE AVIMRDRTTG RARGFGFIVF ADPSVAERVI MDKHIIDGRT VEAKKAVPRD DQQVLKRHAS
101: PMHLISPSHG GNGGGARTKK IFVGGLPSSI TEAEFKNYFD QFGTIADVVV MYDHNTQRPR GFGFITFDSE ESVDMVLHKT FHELNGKMVE VKRAVPKELS
201: STTPNRSPLI GYGNNYGVVP NRSSANSYFN SFPPGYNNNN LGSAGRFSPI GSGRNAFSSF GLGLNQELNL NSNFDGNTLG YSRIPGNQYF NSASPNRYNS
301: PIGYNRGDSA YNPSNRDLWG NRSDSSGPGW NLGVSVGNNR GNWGLSSVVS DNNGYGRSYG AGSGLSGLSF AGNTNGFDGS IGELYRGSSV YSDSTWQQSM
401: PHHQSSNELD GLSRSYGFGI DNVGSDPSAN ASEGYSGNYN VGNRQTHRGI EA
101: PMHLISPSHG GNGGGARTKK IFVGGLPSSI TEAEFKNYFD QFGTIADVVV MYDHNTQRPR GFGFITFDSE ESVDMVLHKT FHELNGKMVE VKRAVPKELS
201: STTPNRSPLI GYGNNYGVVP NRSSANSYFN SFPPGYNNNN LGSAGRFSPI GSGRNAFSSF GLGLNQELNL NSNFDGNTLG YSRIPGNQYF NSASPNRYNS
301: PIGYNRGDSA YNPSNRDLWG NRSDSSGPGW NLGVSVGNNR GNWGLSSVVS DNNGYGRSYG AGSGLSGLSF AGNTNGFDGS IGELYRGSSV YSDSTWQQSM
401: PHHQSSNELD GLSRSYGFGI DNVGSDPSAN ASEGYSGNYN VGNRQTHRGI EA
Arabidopsis Description
AT4g26650/T15N24_100 [Source:UniProtKB/TrEMBL;Acc:Q8W569]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.