Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47808 | Soybean | nucleus | 89.53 | 86.71 |
| VIT_15s0048g02630.t01 | Wine grape | nucleus | 63.9 | 66.29 |
| KRH47819 | Soybean | nucleus | 66.06 | 61.82 |
| KRH75298 | Soybean | cytosol, nucleus | 22.02 | 61.62 |
| KRH06384 | Soybean | nucleus | 66.06 | 60.8 |
| KRH13261 | Soybean | cytosol | 24.91 | 55.65 |
| CDY41556 | Canola | nucleus | 46.93 | 44.83 |
| Bra040485.1-P | Field mustard | nucleus | 51.26 | 43.56 |
| CDY48016 | Canola | nucleus | 51.26 | 43.56 |
| Bra004508.1-P | Field mustard | nucleus | 48.74 | 43.27 |
| CDY41557 | Canola | nucleus | 49.1 | 43.04 |
| CDY27523 | Canola | nucleus | 50.18 | 43.03 |
| CDX80046 | Canola | nucleus | 48.74 | 42.72 |
| AT2G46780.1 | Thale cress | nucleus | 49.46 | 40.77 |
| KRH23771 | Soybean | nucleus | 39.71 | 40.44 |
| KRH40033 | Soybean | nucleus | 39.35 | 40.07 |
| KRH53608 | Soybean | nucleus | 34.66 | 39.02 |
| KRH64318 | Soybean | nucleus | 35.02 | 37.74 |
| KRH62942 | Soybean | mitochondrion | 26.71 | 36.27 |
| KRH60871 | Soybean | nucleus, plastid | 36.1 | 34.97 |
| KRH51553 | Soybean | nucleus, plastid | 35.38 | 34.27 |
| KRH18921 | Soybean | nucleus | 33.21 | 33.33 |
| KRH16743 | Soybean | nucleus | 32.85 | 33.21 |
| KRH62327 | Soybean | nucleus | 32.85 | 31.71 |
| KRH07772 | Soybean | cytosol | 11.19 | 31.63 |
| KRH53044 | Soybean | nucleus | 32.49 | 31.36 |
| KRH06306 | Soybean | nucleus | 28.52 | 29.37 |
| KRH47731 | Soybean | nucleus | 28.16 | 29.21 |
| KRH56541 | Soybean | nucleus | 11.55 | 16.0 |
| KRG95365 | Soybean | nucleus | 18.41 | 15.18 |
| KRH67043 | Soybean | nucleus | 18.41 | 15.0 |
| KRH17717 | Soybean | nucleus | 18.05 | 14.2 |
| KRH71299 | Soybean | nucleus | 19.49 | 14.06 |
| KRH50169 | Soybean | nucleus | 19.49 | 14.06 |
| KRH55109 | Soybean | nucleus | 20.58 | 12.84 |
| KRH26210 | Soybean | nucleus | 20.22 | 12.81 |
| KRH23293 | Soybean | nucleus | 15.16 | 11.9 |
| KRH07154 | Soybean | nucleus | 15.88 | 11.83 |
| KRG94084 | Soybean | nucleus | 15.52 | 11.5 |
| KRH28467 | Soybean | cytosol | 14.8 | 11.23 |
| KRG93213 | Soybean | nucleus | 15.16 | 11.14 |
| KRG94993 | Soybean | nucleus | 19.13 | 11.06 |
| KRH77004 | Soybean | nucleus | 14.44 | 11.05 |
| KRH66628 | Soybean | nucleus | 18.77 | 10.7 |
| KRG98573 | Soybean | nucleus | 18.41 | 10.65 |
| KRH74025 | Soybean | nucleus | 18.05 | 10.53 |
| KRH14098 | Soybean | nucleus | 18.05 | 10.44 |
| KRH52137 | Soybean | nucleus | 14.08 | 10.32 |
| KRH73860 | Soybean | nucleus | 17.69 | 10.27 |
| KRH46297 | Soybean | nucleus | 17.69 | 10.23 |
| KRH34534 | Soybean | nucleus | 16.97 | 9.98 |
| KRG92276 | Soybean | endoplasmic reticulum | 16.97 | 9.87 |
| KRH14284 | Soybean | nucleus | 16.97 | 9.83 |
| KRH61448 | Soybean | nucleus | 13.36 | 9.64 |
| KRH14673 | Soybean | nucleus | 16.97 | 9.51 |
| KRH73477 | Soybean | nucleus | 16.61 | 9.27 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 8.66 | 7.41 |
Protein Annotations
| EntrezGene:100786226 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02009827 | EnsemblPlantsGene:GLYMA_16G018600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7MEQ2 |
| ProteinID:KRH06371.1 | ProteinID:KRH06372.1 | EnsemblPlants:KRH06373 | ProteinID:KRH06373 | ProteinID:KRH06373.1 | ProteinID:KRH06374.1 |
| InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44374 | PANTHER:PTHR44374:SF3 | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000294EFA4 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr16:-:1648737..1651614
Molecular Weight (calculated)
29824.8 Da
IEP (calculated)
8.707
GRAVY (calculated)
-0.392
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGNINSRQ YNDTTSTKIF VGGLAWETQR DTMRRYFEQF GEILEAVVIT DKNTGKSKGY GFVTFKDPEA AMNACQNPSP IIDGRRANCN IAAIGANKNR
101: TQAPQHGQSR AAPGVLASPA FHGPSSTFVN QNIGQYTFPN SSFGIYTGYS QDTMYPMNCY GIFGGQQLST YYPSNGASGQ VGLVHNIYPF SAHYPYNSQA
201: HGFGVQYPQM MQFPILPRHY GSAGILALPS SMAMPITSAV TTTATTTTTE ALRTSVGASQ TAGTTSEQNS SAESLHR
101: TQAPQHGQSR AAPGVLASPA FHGPSSTFVN QNIGQYTFPN SSFGIYTGYS QDTMYPMNCY GIFGGQQLST YYPSNGASGQ VGLVHNIYPF SAHYPYNSQA
201: HGFGVQYPQM MQFPILPRHY GSAGILALPS SMAMPITSAV TTTATTTTTE ALRTSVGASQ TAGTTSEQNS SAESLHR
001: MAQQRQFQME GGNNNTTDTK LTKIFVGGLA WETQRDTMRR YFEQFGEIVE AVVITDKNTG RSKGYGFVTF KEAEAAMRAC QNMNPVIDGR RANCNLACLG
101: AQKPRPPTSP RHGTGRFRSP GSGVGLVAPS PQFRGSSSSS AFVHQQQQQH TAQFPFPYST YGFSGYSQEG MYPMNYYNHH LYGGQQFSPY MGHPSAGSTG
201: MFHGFYPYYP QYNAAQSSNQ AQAQVQAQHH QGFSFQYTAP PAPPLLQYPY LPHQPHFSSQ QQFSSQQPPP PILSLPTSLA LSLPSSSSPS SSTSTSAATT
301: ATKTVVITTA TKKAETEASS KDGNEAMTTS TIKIEG
101: AQKPRPPTSP RHGTGRFRSP GSGVGLVAPS PQFRGSSSSS AFVHQQQQQH TAQFPFPYST YGFSGYSQEG MYPMNYYNHH LYGGQQFSPY MGHPSAGSTG
201: MFHGFYPYYP QYNAAQSSNQ AQAQVQAQHH QGFSFQYTAP PAPPLLQYPY LPHQPHFSSQ QQFSSQQPPP PILSLPTSLA LSLPSSSSPS SSTSTSAATT
301: ATKTVVITTA TKKAETEASS KDGNEAMTTS TIKIEG
Arabidopsis Description
At2g46780 [Source:UniProtKB/TrEMBL;Acc:Q501B0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.