CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50169	Soybean	nucleus	91.93	91.93
PGSC0003DMT400008213	Potato	nucleus	52.34	47.41
GSMUA_Achr5P09550_001	Banana	nucleus	45.57	47.04
Solyc02g021560.2.1	Tomato	nucleus	52.6	46.87
KRH75298	Soybean	cytosol, nucleus	11.72	45.45
GSMUA_Achr5P09540_001	Banana	nucleus	43.75	43.3
KRH26210	Soybean	nucleus	47.92	42.11
KRH55109	Soybean	nucleus	48.44	41.89
KRH13261	Soybean	cytosol	13.28	41.13
Zm00001d044469_P003	Maize	nucleus	46.88	40.27
TraesCS3A01G220400.1	Wheat	nucleus	45.57	39.77
TraesCS3D01G232300.1	Wheat	nucleus	45.57	39.77
EES03272	Sorghum	nucleus	45.83	39.55
TraesCS3B01G250700.1	Wheat	golgi	45.31	39.55
Zm00001d011336_P002	Maize	nucleus	46.09	39.51
HORVU3Hr1G053990.1	Barley	nucleus	45.31	39.46
Os01t0614500-01	Rice	nucleus	45.83	39.37
KRH67043	Soybean	nucleus	29.95	33.82
KRG95365	Soybean	nucleus	29.43	33.63
KRH07772	Soybean	cytosol	7.29	28.57
KRH73477	Soybean	nucleus	35.16	27.22
KRH14673	Soybean	nucleus	34.11	26.52
KRG94993	Soybean	nucleus	32.81	26.3
KRH66628	Soybean	nucleus	33.07	26.13
KRH23771	Soybean	nucleus	17.71	25.0
KRH40033	Soybean	nucleus	17.71	25.0
KRH60871	Soybean	nucleus, plastid	18.23	24.48
KRH62942	Soybean	mitochondrion	12.76	24.02
KRH56541	Soybean	nucleus	12.5	24.0
KRH51553	Soybean	nucleus, plastid	17.71	23.78
KRH18921	Soybean	nucleus	16.67	23.19
KRH16743	Soybean	nucleus	16.15	22.63
KRH64318	Soybean	nucleus	15.1	22.57
KRH53608	Soybean	nucleus	14.32	22.36
KRH53044	Soybean	nucleus	15.62	20.91
KRH62327	Soybean	nucleus	15.62	20.91
KRH47731	Soybean	nucleus	14.32	20.6
KRG94084	Soybean	nucleus	19.79	20.32
KRH47819	Soybean	nucleus	15.62	20.27
KRH06384	Soybean	nucleus	15.62	19.93
KRH07154	Soybean	nucleus	19.27	19.89
KRH17717	Soybean	nucleus	18.23	19.89
KRH06306	Soybean	nucleus	13.8	19.7
KRH06373	Soybean	nucleus	14.06	19.49
KRH23293	Soybean	nucleus	17.19	18.7
KRH47808	Soybean	nucleus	13.54	18.18
KRG93213	Soybean	nucleus	17.71	18.04
KRH52137	Soybean	nucleus	17.71	17.99
KRH61448	Soybean	nucleus	17.71	17.71
KRH77004	Soybean	nucleus	16.41	17.4
KRH28467	Soybean	cytosol	16.41	17.26
KRG98573	Soybean	nucleus	21.09	16.91
KRH46297	Soybean	nucleus	21.09	16.91
KRH73860	Soybean	nucleus	20.05	16.14
KRH14284	Soybean	nucleus	20.05	16.11
KRG92276	Soybean	endoplasmic reticulum	19.79	15.97
KRH34534	Soybean	nucleus	19.53	15.92
KRH74025	Soybean	nucleus	19.27	15.58
KRH14098	Soybean	nucleus	19.27	15.45
KRH05541	Soybean	cytosol, endoplasmic reticulum	10.16	12.04

Protein Annotations

EntrezGene:100816590	Gene3D:3.30.70.330	MapMan:35.1	EMBL:ACUP02000886	EnsemblPlantsGene:GLYMA_02G139900	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	UniProt:K7K898
EnsemblPlants:KRH71299	ProteinID:KRH71299	ProteinID:KRH71299.1	ProteinID:KRH71300.1	ProteinID:KRH71301.1	InterPro:Nucleotide-bd_a/b_plait_sf
PFAM:PF00076	PFscan:PS50102	PANTHER:PTHR44678	PANTHER:PTHR44678:SF2	InterPro:RBD_domain_sf	InterPro:RRM_dom
SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI0002336C39	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:14504848..14510262

Molecular Weight (calculated)

41310.7 Da

IEP (calculated)

7.026

GRAVY (calculated)

-0.564

Length

384 amino acids

Sequence
(BLAST)

001: MEFPKKRKTQ ENGDTTTDSP PPQSTEEAPL AAATPAPASP LASEDIRKIL QPFSQEQLLD LLQSASLRHP DVLDAVRAVA DCDSTLRKLF VRGLAGETTT
101: ETLRSVFSGF GELDEAIVIM DKATGRSKGY GFVVFRHVDG AILALKDPSK KIDGRMTVTQ LAAAGGPGGG DVSLRKVFVG NVPFEISSER LLDEFLKFGE
201: VEEGPLGFDK SSGKSRGFAF FVYKTEEGAR ASLVEPLKTI EGHQVICKLA VDNKKTKPFG TDQHQHQQQH PQQQMQQQVS MMVPQYGGYG GNGYGMQQQQ
301: HQVPPYNNQV PVAGGGGYGH RYGNSQMAGP VSGDYGARVP PNSGGGYPDG SQYGFPPSSG HPPQPRVPMA RPPGGMYQGA PPYY

Best Arabidopsis Sequence Match ( AT3G15010.1 )
(BLAST)

001: MDMMKKRKLD ENGNGLNTNG GGTIGPTRLS PQDARKIIER FTTDQLLDLL QEAIVRHPDV LESVRLTADS DISQRKLFIR GLAADTTTEG LRSLFSSYGD
101: LEEAIVILDK VTGKSKGYGF VTFMHVDGAL LALKEPSKKI DGRVTVTQLA ASGNQGTGSQ IADISMRKIY VANVPFDMPA DRLLNHFMAY GDVEEGPLGF
201: DKVTGKSRGF ALFVYKTAEG AQAALADPVK VIDGKHLNCK LAVDGKKGGK PGMPQAQDGG SGHGHVHGEG MGMVRPAGPY GAAGGISAYG GYSGGPPAHH
301: MNSTHSSMGV GSAGYGGHYG GYGGPGGTGV YGGLGGGYGG PGTGSGQYRM PPSSMPGGGG YPESGHYGLS SSAGYPGQHH QAVGTSPVPR VPHGGMYPNG
401: PPNY

Arabidopsis Description

UBA2CUBP1-associated protein 2C [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.