Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74025 | Soybean | nucleus | 96.87 | 97.68 |
| VIT_12s0057g00480.t01 | Wine grape | nucleus | 80.17 | 80.33 |
| Solyc07g048030.2.1 | Tomato | nucleus | 66.18 | 72.54 |
| PGSC0003DMT400074192 | Potato | nucleus | 68.06 | 68.78 |
| Solyc12g006180.1.1 | Tomato | nucleus | 60.96 | 66.67 |
| GSMUA_Achr10P... | Banana | nucleus | 59.92 | 65.23 |
| HORVU0Hr1G008280.1 | Barley | nucleus | 62.63 | 64.79 |
| TraesCS4A01G150600.1 | Wheat | nucleus | 62.63 | 64.79 |
| TraesCS4D01G152200.1 | Wheat | nucleus | 62.63 | 64.79 |
| GSMUA_Achr10P... | Banana | nucleus | 62.21 | 64.78 |
| KRH46297 | Soybean | nucleus | 64.72 | 64.72 |
| TraesCSU01G068500.1 | Wheat | nucleus | 62.42 | 64.58 |
| KRH73860 | Soybean | nucleus | 63.67 | 63.94 |
| KRG98573 | Soybean | nucleus | 63.88 | 63.88 |
| Os11t0637700-01 | Rice | plasma membrane | 62.21 | 63.81 |
| KRH14284 | Soybean | nucleus | 63.05 | 63.18 |
| GSMUA_Achr6P10970_001 | Banana | nucleus | 64.93 | 62.2 |
| GSMUA_Achr4P33100_001 | Banana | nucleus | 57.2 | 61.99 |
| Os07t0584500-01 | Rice | nucleus | 57.83 | 58.69 |
| EER97452 | Sorghum | nucleus | 57.62 | 58.6 |
| Zm00001d019079_P001 | Maize | cytosol | 53.86 | 57.59 |
| EER98147 | Sorghum | nucleus | 54.28 | 57.4 |
| TraesCS2B01G216600.2 | Wheat | cytosol | 56.37 | 57.32 |
| Zm00001d007772_P001 | Maize | nucleus | 53.65 | 57.24 |
| TraesCS2D01G197500.2 | Wheat | nucleus | 56.16 | 57.23 |
| Zm00001d006704_P002 | Maize | nucleus | 57.62 | 57.02 |
| EER96020 | Sorghum | nucleus | 54.07 | 56.92 |
| Zm00001d019084_P002 | Maize | nucleus | 53.24 | 56.17 |
| KRH07772 | Soybean | cytosol | 11.48 | 56.12 |
| TraesCS2A01G190400.1 | Wheat | plastid | 55.74 | 50.28 |
| Zm00001d021950_P007 | Maize | endoplasmic reticulum, nucleus | 56.78 | 50.28 |
| Zm00001d019086_P001 | Maize | nucleus | 54.49 | 49.06 |
| OQU83904 | Sorghum | nucleus | 45.09 | 48.0 |
| GSMUA_Achr3P02300_001 | Banana | nucleus | 64.09 | 45.21 |
| KRH34534 | Soybean | nucleus | 39.67 | 40.34 |
| KRG92276 | Soybean | endoplasmic reticulum | 39.67 | 39.92 |
| KRH56541 | Soybean | nucleus | 16.08 | 38.5 |
| KRH17717 | Soybean | nucleus | 27.77 | 37.78 |
| KRH07154 | Soybean | nucleus | 29.02 | 37.37 |
| KRG94084 | Soybean | nucleus | 29.02 | 37.17 |
| KRH23293 | Soybean | nucleus | 25.89 | 35.13 |
| KRG93213 | Soybean | nucleus | 26.3 | 33.42 |
| KRH61448 | Soybean | nucleus | 26.1 | 32.55 |
| KRH52137 | Soybean | nucleus | 25.68 | 32.54 |
| KRH28467 | Soybean | cytosol | 22.34 | 29.32 |
| KRH75298 | Soybean | cytosol, nucleus | 6.05 | 29.29 |
| KRH77004 | Soybean | nucleus | 22.13 | 29.28 |
| KRH13261 | Soybean | cytosol | 7.1 | 27.42 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 17.33 | 25.62 |
| KRH40033 | Soybean | nucleus | 12.94 | 22.79 |
| KRH23771 | Soybean | nucleus | 12.94 | 22.79 |
| KRH51553 | Soybean | nucleus, plastid | 12.94 | 21.68 |
| KRH60871 | Soybean | nucleus, plastid | 12.73 | 21.33 |
| KRH64318 | Soybean | nucleus | 11.27 | 21.01 |
| KRH53608 | Soybean | nucleus | 10.65 | 20.73 |
| KRH18921 | Soybean | nucleus | 11.9 | 20.65 |
| KRH16743 | Soybean | nucleus | 11.69 | 20.44 |
| KRH26210 | Soybean | nucleus | 18.58 | 20.37 |
| KRH55109 | Soybean | nucleus | 18.58 | 20.05 |
| KRG95365 | Soybean | nucleus | 13.99 | 19.94 |
| KRH50169 | Soybean | nucleus | 15.87 | 19.79 |
| KRH06384 | Soybean | nucleus | 12.32 | 19.6 |
| KRH67043 | Soybean | nucleus | 13.78 | 19.41 |
| KRH71299 | Soybean | nucleus | 15.45 | 19.27 |
| KRH06306 | Soybean | nucleus | 10.65 | 18.96 |
| KRH47819 | Soybean | nucleus | 11.69 | 18.92 |
| KRH47731 | Soybean | nucleus | 10.44 | 18.73 |
| KRH62327 | Soybean | nucleus | 10.86 | 18.12 |
| KRH06373 | Soybean | nucleus | 10.44 | 18.05 |
| KRH47808 | Soybean | nucleus | 10.65 | 17.83 |
| KRH62942 | Soybean | mitochondrion | 7.52 | 17.65 |
| KRH53044 | Soybean | nucleus | 10.44 | 17.42 |
| KRH73477 | Soybean | nucleus | 16.49 | 15.93 |
| KRH14673 | Soybean | nucleus | 16.08 | 15.59 |
| KRG94993 | Soybean | nucleus | 15.45 | 15.45 |
| KRH66628 | Soybean | nucleus | 15.03 | 14.81 |
Protein Annotations
| EntrezGene:100795907 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02008492 | InterPro:DAZAP1_RRM2 | EnsemblPlantsGene:GLYMA_14G006400 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1M687 | InterPro:IPR000504 |
| InterPro:IPR012677 | EnsemblPlants:KRH14098 | ProteinID:KRH14098 | ProteinID:KRH14098.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFscan:PS50102 | PANTHER:PTHR44291 | PANTHER:PTHR44291:SF2 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 |
| SUPFAM:SSF54928 | UniParc:UPI000233BB02 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:506220..512622
Molecular Weight (calculated)
50384.8 Da
IEP (calculated)
9.054
GRAVY (calculated)
-0.505
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSDNGKLFI GGISWDTNEE RLREYFSTYG EVVEAVIMKD RTTGRARGFG FVVFSDPAIA EIVIKEKHNI DGRMVEAKKA VPRDDQNILS RNSGSIHGSP
101: GPGRTRKIFV GGLASTVTES DFKKYFDQFG TITDVVVMYD HNTQRPRGFG FITYDSEEAV DKVLLKTFHE LNGKMVEVKR AVPKELSPGP SRTPLGGYNY
201: GLTRVNSFLN GFTQGYTPST VGGYGLRADD RFSPVAGGRS GFAPFGSGYG MSMNFEPGLN AGFGGNANFN SNLSYDRGIN PYFIGSSNRF GSPVGYESGN
301: GGNNSFFSSV TRNLWGNGGL SYGTSSANSN AYIGSGSGSA GGNTFGNTGV NWSSSAISGQ QGGGNNMSQS SGNLGYGGGD NNYGLGTGGY GRSSGAIFAP
401: TSSYSASNGG VDGAFADFYN NSSVYGDPTW RSSNSERDGS GPFGYGLGGA ASDVSAKSSP GYVGGYTVNK RQPNRGIAT
101: GPGRTRKIFV GGLASTVTES DFKKYFDQFG TITDVVVMYD HNTQRPRGFG FITYDSEEAV DKVLLKTFHE LNGKMVEVKR AVPKELSPGP SRTPLGGYNY
201: GLTRVNSFLN GFTQGYTPST VGGYGLRADD RFSPVAGGRS GFAPFGSGYG MSMNFEPGLN AGFGGNANFN SNLSYDRGIN PYFIGSSNRF GSPVGYESGN
301: GGNNSFFSSV TRNLWGNGGL SYGTSSANSN AYIGSGSGSA GGNTFGNTGV NWSSSAISGQ QGGGNNMSQS SGNLGYGGGD NNYGLGTGGY GRSSGAIFAP
401: TSSYSASNGG VDGAFADFYN NSSVYGDPTW RSSNSERDGS GPFGYGLGGA ASDVSAKSSP GYVGGYTVNK RQPNRGIAT
001: MQSDNGKLFI GGISWDTNEE RLKEYFSSFG EVIEAVILKD RTTGRARGFG FVVFADPAVA EIVITEKHNI DGRLVEAKKA VPRDDQNMVN RSNSSSIQGS
101: PGGPGRTRKI FVGGLPSSVT ESDFKTYFEQ FGTTTDVVVM YDHNTQRPRG FGFITYDSEE AVEKVLLKTF HELNGKMVEV KRAVPKELSP GPSRSPLGAG
201: YSYGVNRVNN LLNGYAQGFN PAAVGGYGLR MDGRFSPVGA GRSGFANYSS GYGMNVNFDQ GLPTGFTGGT NYNGNVDYGR GMSPYYIGNT NRFGPAVGYE
301: GGNGGGNSSF FSSVTRNLWG NNGGLNYNNN NTNSNSNTYM GGSSSGNNTL SGPFGNSGVN WGAPGGGNNA VSNENVKFGY GGNGESGFGL GTGGYAARNP
401: GANKAAPSSS FSSASATNNT GYDTAGLAEF YGNGAVYSDP TWRSPTPETE GPAPFSYGIG GGVPSSDVSA RSSSPGYVGS YSVNKRQPNR GIAT
101: PGGPGRTRKI FVGGLPSSVT ESDFKTYFEQ FGTTTDVVVM YDHNTQRPRG FGFITYDSEE AVEKVLLKTF HELNGKMVEV KRAVPKELSP GPSRSPLGAG
201: YSYGVNRVNN LLNGYAQGFN PAAVGGYGLR MDGRFSPVGA GRSGFANYSS GYGMNVNFDQ GLPTGFTGGT NYNGNVDYGR GMSPYYIGNT NRFGPAVGYE
301: GGNGGGNSSF FSSVTRNLWG NNGGLNYNNN NTNSNSNTYM GGSSSGNNTL SGPFGNSGVN WGAPGGGNNA VSNENVKFGY GGNGESGFGL GTGGYAARNP
401: GANKAAPSSS FSSASATNNT GYDTAGLAEF YGNGAVYSDP TWRSPTPETE GPAPFSYGIG GGVPSSDVSA RSSSPGYVGS YSVNKRQPNR GIAT
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:F4JFN7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.