Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06384 | Soybean | nucleus | 94.26 | 92.69 |
| VIT_15s0048g02630.t01 | Wine grape | nucleus | 66.22 | 73.41 |
| KRH75298 | Soybean | cytosol, nucleus | 22.64 | 67.68 |
| KRH06373 | Soybean | nucleus | 61.82 | 66.06 |
| KRH47808 | Soybean | nucleus | 62.16 | 64.34 |
| KRH13261 | Soybean | cytosol | 25.34 | 60.48 |
| CDY41556 | Canola | nucleus | 47.64 | 48.62 |
| KRH23771 | Soybean | nucleus | 43.58 | 47.43 |
| Bra004508.1-P | Field mustard | nucleus | 49.32 | 46.79 |
| KRH40033 | Soybean | nucleus | 42.91 | 46.69 |
| CDX80046 | Canola | nucleus | 49.32 | 46.2 |
| CDY41557 | Canola | nucleus | 49.32 | 46.2 |
| CDY27523 | Canola | nucleus | 48.65 | 44.58 |
| Bra040485.1-P | Field mustard | nucleus | 48.99 | 44.48 |
| CDY48016 | Canola | nucleus | 48.99 | 44.48 |
| AT2G46780.1 | Thale cress | nucleus | 49.66 | 43.75 |
| KRH53608 | Soybean | nucleus | 35.47 | 42.68 |
| KRH64318 | Soybean | nucleus | 36.82 | 42.41 |
| KRH60871 | Soybean | nucleus, plastid | 40.54 | 41.96 |
| KRH51553 | Soybean | nucleus, plastid | 39.86 | 41.26 |
| KRH62942 | Soybean | mitochondrion | 27.36 | 39.71 |
| KRH16743 | Soybean | nucleus | 32.77 | 35.4 |
| KRH18921 | Soybean | nucleus | 32.77 | 35.14 |
| KRH53044 | Soybean | nucleus | 32.09 | 33.1 |
| KRH62327 | Soybean | nucleus | 32.09 | 33.1 |
| KRH47731 | Soybean | nucleus | 28.72 | 31.84 |
| KRH06306 | Soybean | nucleus | 28.72 | 31.6 |
| KRH07772 | Soybean | cytosol | 10.14 | 30.61 |
| KRG95365 | Soybean | nucleus | 18.24 | 16.07 |
| KRH56541 | Soybean | nucleus | 10.81 | 16.0 |
| KRH67043 | Soybean | nucleus | 18.24 | 15.88 |
| KRH71299 | Soybean | nucleus | 20.27 | 15.62 |
| KRH50169 | Soybean | nucleus | 19.93 | 15.36 |
| KRH17717 | Soybean | nucleus | 17.23 | 14.49 |
| KRH26210 | Soybean | nucleus | 20.27 | 13.73 |
| KRH55109 | Soybean | nucleus | 20.27 | 13.51 |
| KRH23293 | Soybean | nucleus | 15.88 | 13.31 |
| KRH07154 | Soybean | nucleus | 16.22 | 12.9 |
| KRG94084 | Soybean | nucleus | 15.88 | 12.57 |
| KRH73860 | Soybean | nucleus | 19.93 | 12.37 |
| KRH14284 | Soybean | nucleus | 19.59 | 12.13 |
| KRH46297 | Soybean | nucleus | 19.59 | 12.11 |
| KRG93213 | Soybean | nucleus | 15.2 | 11.94 |
| KRG98573 | Soybean | nucleus | 19.26 | 11.9 |
| KRG94993 | Soybean | nucleus | 19.26 | 11.9 |
| KRH74025 | Soybean | nucleus | 18.92 | 11.79 |
| KRH28467 | Soybean | cytosol | 14.53 | 11.78 |
| KRH66628 | Soybean | nucleus | 19.26 | 11.73 |
| KRH14098 | Soybean | nucleus | 18.92 | 11.69 |
| KRH77004 | Soybean | nucleus | 14.19 | 11.6 |
| KRH14673 | Soybean | nucleus | 19.26 | 11.54 |
| KRH34534 | Soybean | nucleus | 18.24 | 11.46 |
| KRG92276 | Soybean | endoplasmic reticulum | 18.24 | 11.34 |
| KRH73477 | Soybean | nucleus | 18.92 | 11.29 |
| KRH52137 | Soybean | nucleus | 14.19 | 11.11 |
| KRH61448 | Soybean | nucleus | 13.51 | 10.42 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 10.14 | 9.26 |
Protein Annotations
| EntrezGene:100786208 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02004170 | EnsemblPlantsGene:GLYMA_07G050700 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1KHQ5 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH47819 | ProteinID:KRH47819 | ProteinID:KRH47819.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44374 | PANTHER:PTHR44374:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0002338689 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:4376298..4379923
Molecular Weight (calculated)
32194.2 Da
IEP (calculated)
9.211
GRAVY (calculated)
-0.509
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQQRQTQMV GGNNPDQYND TTFTKIFVGG LAWETQRDTM RRYFEQFGEI LEAVVITDKN TGRSKGYGFV TFKDPESAMR ACQNPSPVID GRRANCNLAS
101: LGASKNRPPT FQHGAGRFRP PPGLVASPPA YHGSSSTFFH QPPRQYTFPY SAYRYSGYSQ DTLYPTSYYN VYGVQQFSPY YPSAGASGEV GLIHNIYPFY
201: GQYAQSIQAP GFGVQYPQMA QFPFLPQHYG SSTGILSYPS SVTVPTTSAV TGIATTTTTT TTSASVAATV VGTTSQASQA ASEQTSTSTR SQNLQG
101: LGASKNRPPT FQHGAGRFRP PPGLVASPPA YHGSSSTFFH QPPRQYTFPY SAYRYSGYSQ DTLYPTSYYN VYGVQQFSPY YPSAGASGEV GLIHNIYPFY
201: GQYAQSIQAP GFGVQYPQMA QFPFLPQHYG SSTGILSYPS SVTVPTTSAV TGIATTTTTT TTSASVAATV VGTTSQASQA ASEQTSTSTR SQNLQG
001: MAQQRQFQME GGNNNTTDTK LTKIFVGGLA WETQRDTMRR YFEQFGEIVE AVVITDKNTG RSKGYGFVTF KEAEAAMRAC QNMNPVIDGR RANCNLACLG
101: AQKPRPPTSP RHGTGRFRSP GSGVGLVAPS PQFRGSSSSS AFVHQQQQQH TAQFPFPYST YGFSGYSQEG MYPMNYYNHH LYGGQQFSPY MGHPSAGSTG
201: MFHGFYPYYP QYNAAQSSNQ AQAQVQAQHH QGFSFQYTAP PAPPLLQYPY LPHQPHFSSQ QQFSSQQPPP PILSLPTSLA LSLPSSSSPS SSTSTSAATT
301: ATKTVVITTA TKKAETEASS KDGNEAMTTS TIKIEG
101: AQKPRPPTSP RHGTGRFRSP GSGVGLVAPS PQFRGSSSSS AFVHQQQQQH TAQFPFPYST YGFSGYSQEG MYPMNYYNHH LYGGQQFSPY MGHPSAGSTG
201: MFHGFYPYYP QYNAAQSSNQ AQAQVQAQHH QGFSFQYTAP PAPPLLQYPY LPHQPHFSSQ QQFSSQQPPP PILSLPTSLA LSLPSSSSPS SSTSTSAATT
301: ATKTVVITTA TKKAETEASS KDGNEAMTTS TIKIEG
Arabidopsis Description
At2g46780 [Source:UniProtKB/TrEMBL;Acc:Q501B0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.