Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47731 | Soybean | nucleus | 91.82 | 92.51 |
| KRH75298 | Soybean | cytosol, nucleus | 21.56 | 58.59 |
| Solyc04g049920.2.1 | Tomato | nucleus | 50.56 | 56.43 |
| VIT_13s0019g03610.t01 | Wine grape | nucleus | 50.93 | 55.47 |
| PGSC0003DMT400027411 | Potato | nucleus | 51.3 | 54.33 |
| KRH13261 | Soybean | cytosol | 23.42 | 50.81 |
| CDY02889 | Canola | nucleus | 36.8 | 45.62 |
| AT3G54770.1 | Thale cress | nucleus | 42.01 | 43.3 |
| CDX73451 | Canola | cytosol | 39.78 | 42.8 |
| CDY64698 | Canola | nucleus | 40.89 | 42.15 |
| GSMUA_Achr3P13820_001 | Banana | cytosol | 43.12 | 41.58 |
| GSMUA_Achr11P... | Banana | nucleus | 40.89 | 41.51 |
| Bra007096.1-P | Field mustard | nucleus | 39.78 | 41.31 |
| CDX78261 | Canola | nucleus | 39.78 | 41.31 |
| TraesCS4B01G197500.2 | Wheat | cytosol, mitochondrion, nucleus | 45.72 | 41.14 |
| TraesCS4A01G106800.2 | Wheat | cytosol, mitochondrion, nucleus | 45.35 | 40.53 |
| Zm00001d028714_P001 | Maize | cytosol, nucleus, plasma membrane | 44.61 | 40.4 |
| Zm00001d047753_P001 | Maize | cytosol, mitochondrion, nucleus | 41.64 | 40.14 |
| Os03t0286500-01 | Rice | cytosol, nucleus, plastid | 45.72 | 39.68 |
| EER95048 | Sorghum | cytosol, nucleus, plastid | 45.35 | 39.35 |
| TraesCS4D01G198000.3 | Wheat | cytosol | 46.1 | 38.87 |
| HORVU4Hr1G057110.23 | Barley | nucleus | 44.24 | 38.39 |
| KRH40033 | Soybean | nucleus | 34.2 | 33.82 |
| KRH23771 | Soybean | nucleus | 34.2 | 33.82 |
| KRH62942 | Soybean | mitochondrion | 24.91 | 32.84 |
| KRH07772 | Soybean | cytosol | 11.9 | 32.65 |
| KRH53608 | Soybean | nucleus | 29.74 | 32.52 |
| KRH64318 | Soybean | nucleus | 30.48 | 31.91 |
| KRH51553 | Soybean | nucleus, plastid | 33.46 | 31.47 |
| KRH60871 | Soybean | nucleus, plastid | 33.09 | 31.12 |
| KRH16743 | Soybean | nucleus | 30.48 | 29.93 |
| KRH18921 | Soybean | nucleus | 30.48 | 29.71 |
| KRH47819 | Soybean | nucleus | 31.6 | 28.72 |
| KRH53044 | Soybean | nucleus | 30.48 | 28.57 |
| KRH06373 | Soybean | nucleus | 29.37 | 28.52 |
| KRH06384 | Soybean | nucleus | 31.6 | 28.24 |
| KRH62327 | Soybean | nucleus | 29.74 | 27.87 |
| KRH47808 | Soybean | nucleus | 29.37 | 27.62 |
| KRH56541 | Soybean | nucleus | 13.38 | 18.0 |
| KRH67043 | Soybean | nucleus | 18.96 | 15.0 |
| KRG95365 | Soybean | nucleus | 18.59 | 14.88 |
| KRH55109 | Soybean | nucleus | 23.79 | 14.41 |
| KRH26210 | Soybean | nucleus | 23.05 | 14.19 |
| KRH07154 | Soybean | nucleus | 19.33 | 13.98 |
| KRG94084 | Soybean | nucleus | 19.33 | 13.9 |
| KRH50169 | Soybean | nucleus | 19.7 | 13.8 |
| KRH71299 | Soybean | nucleus | 19.7 | 13.8 |
| KRH17717 | Soybean | nucleus | 17.84 | 13.64 |
| KRG93213 | Soybean | nucleus | 18.59 | 13.26 |
| KRH23293 | Soybean | nucleus | 16.73 | 12.75 |
| KRH52137 | Soybean | nucleus | 17.1 | 12.17 |
| KRH61448 | Soybean | nucleus | 17.1 | 11.98 |
| KRG98573 | Soybean | nucleus | 21.19 | 11.9 |
| KRH73860 | Soybean | nucleus | 20.45 | 11.53 |
| KRH46297 | Soybean | nucleus | 20.45 | 11.48 |
| KRH34534 | Soybean | nucleus | 20.07 | 11.46 |
| KRG92276 | Soybean | endoplasmic reticulum | 20.07 | 11.34 |
| KRH14284 | Soybean | nucleus | 19.7 | 11.09 |
| KRH74025 | Soybean | nucleus | 18.96 | 10.74 |
| KRH14673 | Soybean | nucleus | 19.7 | 10.73 |
| KRH14098 | Soybean | nucleus | 18.96 | 10.65 |
| KRH73477 | Soybean | nucleus | 19.33 | 10.48 |
| KRH28467 | Soybean | cytosol | 13.75 | 10.14 |
| KRG94993 | Soybean | nucleus | 17.84 | 10.02 |
| KRH77004 | Soybean | nucleus | 13.38 | 9.94 |
| KRH66628 | Soybean | nucleus | 17.84 | 9.88 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 10.78 | 8.95 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02009825 | EnsemblPlantsGene:GLYMA_16G015300 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | UniProt:I1MK88 | InterPro:IPR000504 | InterPro:IPR012677 | EnsemblPlants:KRH06306 |
| ProteinID:KRH06306 | ProteinID:KRH06306.1 | ProteinID:KRH06307.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44374 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000233BA6A |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:1335008..1337934
Molecular Weight (calculated)
29451.0 Da
IEP (calculated)
9.429
GRAVY (calculated)
-0.415
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMMSSSNNN VGEFGDTTLT KVFVGGLAWE TPKDALKDHF EKYGQILEAV IISDKHTGKS KGYGFVTFKE AEAAKKACEN STTLIINGRR ANCNLAFLGA
101: RRPRSSSNVS PPPPQAQGGS NGGIVKNVNN ASGPPPAINH VQPYYYPVRT TALPFHNHTL PFYGYAPTYI VTDVNYNYNQ NQKLCYGSGG AYMNGQHVYP
201: RQAIVGGNTL MPMYPLYQYH HPTETIGVPA HHNFYQTAPW VPMTIMSKPS SIVPHTGTVG TGECFKRVV
101: RRPRSSSNVS PPPPQAQGGS NGGIVKNVNN ASGPPPAINH VQPYYYPVRT TALPFHNHTL PFYGYAPTYI VTDVNYNYNQ NQKLCYGSGG AYMNGQHVYP
201: RQAIVGGNTL MPMYPLYQYH HPTETIGVPA HHNFYQTAPW VPMTIMSKPS SIVPHTGTVG TGECFKRVV
001: MTTSNNVNGC FGDTKLTKVF VGGLAWDTHK EAMYDHFIKY GDILEAVIIS DKLTRRSKGY GFVTFKDAKA ATRACEDSTP IINGRRANCN LASLGGRLRK
101: SPTMTSPQQG PKNGNRATPP HVGNHSQWYY PSGFTNQQHQ QQNHQAVPFY GYPSAYVAPN MTFNQKVGYV GGTYMNGYYA QMQPQPQSQP QPQYYHHHMY
201: GGGRVMVGAA SPMVPFYTVY PYHQSQAIGF PQPSFSKPLS FSTPPISGTV GGESIQKKAI H
101: SPTMTSPQQG PKNGNRATPP HVGNHSQWYY PSGFTNQQHQ QQNHQAVPFY GYPSAYVAPN MTFNQKVGYV GGTYMNGYYA QMQPQPQSQP QPQYYHHHMY
201: GGGRVMVGAA SPMVPFYTVY PYHQSQAIGF PQPSFSKPLS FSTPPISGTV GGESIQKKAI H
Arabidopsis Description
ARP1Probable RNA-binding protein ARP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1S3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.