Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53044 | Soybean | nucleus | 91.99 | 91.99 |
| KRH18921 | Soybean | nucleus | 74.56 | 77.54 |
| KRH16743 | Soybean | nucleus | 73.52 | 77.01 |
| VIT_18s0001g05840.t01 | Wine grape | nucleus | 65.16 | 67.75 |
| KRH75298 | Soybean | cytosol, nucleus | 20.91 | 60.61 |
| Solyc04g074310.2.1 | Tomato | nucleus | 58.88 | 57.68 |
| KRH13261 | Soybean | cytosol | 23.34 | 54.03 |
| AT1G78260.1 | Thale cress | nucleus | 51.92 | 51.92 |
| CDX87460 | Canola | nucleus | 50.17 | 50.53 |
| CDX88432 | Canola | nucleus | 49.48 | 50.0 |
| CDX68024 | Canola | nucleus | 48.78 | 49.47 |
| Bra003651.1-P | Field mustard | nucleus | 46.69 | 49.45 |
| CDX79253 | Canola | nucleus | 47.74 | 48.93 |
| Bra031385.1-P | Field mustard | nucleus | 49.13 | 48.62 |
| CDY46642 | Canola | nucleus | 48.78 | 48.44 |
| CDY21356 | Canola | nucleus | 48.78 | 48.28 |
| Bra012321.1-P | Field mustard | nucleus | 48.43 | 48.1 |
| AT1G22330.1 | Thale cress | nucleus | 48.43 | 47.77 |
| KRH51553 | Soybean | nucleus, plastid | 41.12 | 41.26 |
| KRH60871 | Soybean | nucleus, plastid | 40.77 | 40.91 |
| CDY00446 | Canola | nucleus | 48.43 | 40.88 |
| KRH62942 | Soybean | mitochondrion | 27.87 | 39.22 |
| KRH23771 | Soybean | nucleus | 35.19 | 37.13 |
| KRH40033 | Soybean | nucleus | 35.19 | 37.13 |
| KRH53608 | Soybean | nucleus | 31.01 | 36.18 |
| KRH64318 | Soybean | nucleus | 31.01 | 34.63 |
| KRH06373 | Soybean | nucleus | 31.71 | 32.85 |
| KRH06384 | Soybean | nucleus | 33.8 | 32.23 |
| KRH47819 | Soybean | nucleus | 33.1 | 32.09 |
| KRH07772 | Soybean | cytosol | 10.8 | 31.63 |
| KRH47808 | Soybean | nucleus | 30.66 | 30.77 |
| KRH06306 | Soybean | nucleus | 27.87 | 29.74 |
| KRH47731 | Soybean | nucleus | 27.53 | 29.59 |
| VIT_16s0098g01050.t01 | Wine grape | endoplasmic reticulum, extracellular | 24.39 | 24.05 |
| KRH56541 | Soybean | nucleus | 11.85 | 17.0 |
| KRG95365 | Soybean | nucleus | 19.16 | 16.37 |
| KRH67043 | Soybean | nucleus | 19.16 | 16.18 |
| KRH71299 | Soybean | nucleus | 20.91 | 15.62 |
| KRH50169 | Soybean | nucleus | 20.56 | 15.36 |
| KRH55109 | Soybean | nucleus | 22.3 | 14.41 |
| KRH17717 | Soybean | nucleus | 17.42 | 14.2 |
| KRH26210 | Soybean | nucleus | 21.6 | 14.19 |
| KRH23293 | Soybean | nucleus | 17.42 | 14.16 |
| KRH07154 | Soybean | nucleus | 17.77 | 13.71 |
| KRG94084 | Soybean | nucleus | 17.77 | 13.64 |
| KRG93213 | Soybean | nucleus | 16.72 | 12.73 |
| KRH28467 | Soybean | cytosol | 15.33 | 12.05 |
| KRH77004 | Soybean | nucleus | 14.98 | 11.88 |
| KRH52137 | Soybean | nucleus | 14.98 | 11.38 |
| KRH73477 | Soybean | nucleus | 19.51 | 11.29 |
| KRG94993 | Soybean | nucleus | 18.82 | 11.27 |
| KRH14673 | Soybean | nucleus | 19.16 | 11.13 |
| KRH34534 | Soybean | nucleus | 18.12 | 11.04 |
| KRH74025 | Soybean | nucleus | 18.12 | 10.95 |
| KRH61448 | Soybean | nucleus | 14.63 | 10.94 |
| KRG92276 | Soybean | endoplasmic reticulum | 18.12 | 10.92 |
| KRH66628 | Soybean | nucleus | 18.47 | 10.91 |
| KRG98573 | Soybean | nucleus | 18.12 | 10.86 |
| KRH14098 | Soybean | nucleus | 18.12 | 10.86 |
| KRH46297 | Soybean | nucleus | 17.77 | 10.65 |
| KRH73860 | Soybean | nucleus | 17.42 | 10.48 |
| KRH14284 | Soybean | nucleus | 17.42 | 10.46 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 11.5 | 10.19 |
Protein Annotations
| EntrezGene:100811977 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02002235 | EnsemblPlantsGene:GLYMA_04G100600 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1JVD0 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH62327 | ProteinID:KRH62327 | ProteinID:KRH62327.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR44828 | PANTHER:PTHR44828:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI000233995E | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:9238404..9242418
Molecular Weight (calculated)
31554.7 Da
IEP (calculated)
9.069
GRAVY (calculated)
-0.723
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MSETATLHAQ TRTPISSLDS MAHHHPHYRS PFGDTTFTKL FVGGLAWETP TEEMRKYFEQ FGNILEAVII TDKNTGKSKG YGFVTFCDQE SARRACADPN
101: PIIDGRRANC NIASLGRTRL SPPRGRNVVQ GGGGTAQGVP GVGLPPSLPP PPPVLYPPYG YTTYTPDYGY HQATMYNPQI QQPQYYQQLY GASSSTMSTP
201: YYYGYSVQAP RNAFSSPQAN RLSPGPSYLY YPTPMEVSFS GYRPPQQTPM RQTFASPNDS QSQQRTSSET AAGVAITSER SNTQGKN
101: PIIDGRRANC NIASLGRTRL SPPRGRNVVQ GGGGTAQGVP GVGLPPSLPP PPPVLYPPYG YTTYTPDYGY HQATMYNPQI QQPQYYQQLY GASSSTMSTP
201: YYYGYSVQAP RNAFSSPQAN RLSPGPSYLY YPTPMEVSFS GYRPPQQTPM RQTFASPNDS QSQQRTSSET AAGVAITSER SNTQGKN
001: MSQTSYYRSP FGDTTYTKVF VGGLAWETPT DEMRRYFEQF GEILEAVIIT DKNTGKSKGY GFVTFRESDS ATRAVADPNP VIDGRKANCN IASFGRPRPS
101: PPRGRGQTGS PSQYQSGGPS TYTGMAAPLP PAAAPQLMYP SYGYTYNPDQ FGYHQALYNT QLQQAQYYQQ QQQLYGGGAT SPSSSGATIM PSPYYYGYSL
201: QAPRVPYQHH HHLPQPYNPQ QHHHQRFSSP SFLVYPSNSS FAPPLQGVLS SSTESEAVPQ QVPAAEGEAT TTAPEITTSN TKEPISS
101: PPRGRGQTGS PSQYQSGGPS TYTGMAAPLP PAAAPQLMYP SYGYTYNPDQ FGYHQALYNT QLQQAQYYQQ QQQLYGGGAT SPSSSGATIM PSPYYYGYSL
201: QAPRVPYQHH HHLPQPYNPQ QHHHQRFSSP SFLVYPSNSS FAPPLQGVLS SSTESEAVPQ QVPAAEGEAT TTAPEITTSN TKEPISS
Arabidopsis Description
At1g78260 [Source:UniProtKB/TrEMBL;Acc:Q8LF90]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.