Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06373 | Soybean | nucleus | 86.71 | 89.53 |
| VIT_15s0048g02630.t01 | Wine grape | nucleus | 61.19 | 65.54 |
| KRH47819 | Soybean | nucleus | 64.34 | 62.16 |
| KRH75298 | Soybean | cytosol, nucleus | 20.63 | 59.6 |
| KRH06384 | Soybean | nucleus | 62.59 | 59.47 |
| KRH13261 | Soybean | cytosol | 23.43 | 54.03 |
| CDY41556 | Canola | nucleus | 42.66 | 42.07 |
| Bra004508.1-P | Field mustard | nucleus | 44.41 | 40.71 |
| CDY27523 | Canola | nucleus | 45.8 | 40.56 |
| CDY41557 | Canola | nucleus | 44.76 | 40.51 |
| Bra040485.1-P | Field mustard | nucleus | 46.15 | 40.49 |
| CDY48016 | Canola | nucleus | 46.15 | 40.49 |
| CDX80046 | Canola | nucleus | 44.41 | 40.19 |
| KRH23771 | Soybean | nucleus | 37.76 | 39.71 |
| KRH40033 | Soybean | nucleus | 37.41 | 39.34 |
| AT2G46780.1 | Thale cress | nucleus | 45.1 | 38.39 |
| KRH60871 | Soybean | nucleus, plastid | 36.36 | 36.36 |
| KRH62942 | Soybean | mitochondrion | 25.87 | 36.27 |
| KRH53608 | Soybean | nucleus | 31.12 | 36.18 |
| KRH64318 | Soybean | nucleus | 32.17 | 35.8 |
| KRH51553 | Soybean | nucleus, plastid | 35.66 | 35.66 |
| KRH16743 | Soybean | nucleus | 30.77 | 32.12 |
| KRH18921 | Soybean | nucleus | 30.77 | 31.88 |
| KRH62327 | Soybean | nucleus | 30.77 | 30.66 |
| KRH07772 | Soybean | cytosol | 10.49 | 30.61 |
| KRH53044 | Soybean | nucleus | 30.42 | 30.31 |
| KRH47731 | Soybean | nucleus | 27.62 | 29.59 |
| KRH06306 | Soybean | nucleus | 27.62 | 29.37 |
| KRH56541 | Soybean | nucleus | 10.84 | 15.5 |
| KRG95365 | Soybean | nucleus | 17.48 | 14.88 |
| KRH67043 | Soybean | nucleus | 17.48 | 14.71 |
| KRH17717 | Soybean | nucleus | 17.13 | 13.92 |
| KRH71299 | Soybean | nucleus | 18.18 | 13.54 |
| KRH50169 | Soybean | nucleus | 18.18 | 13.54 |
| KRH26210 | Soybean | nucleus | 19.58 | 12.81 |
| KRH55109 | Soybean | nucleus | 19.58 | 12.61 |
| KRH07154 | Soybean | nucleus | 15.38 | 11.83 |
| KRG94084 | Soybean | nucleus | 15.04 | 11.5 |
| KRH23293 | Soybean | nucleus | 13.99 | 11.33 |
| KRG94993 | Soybean | nucleus | 18.88 | 11.27 |
| KRH66628 | Soybean | nucleus | 18.53 | 10.91 |
| KRH73860 | Soybean | nucleus | 18.18 | 10.9 |
| KRG93213 | Soybean | nucleus | 14.34 | 10.88 |
| KRH74025 | Soybean | nucleus | 17.83 | 10.74 |
| KRH28467 | Soybean | cytosol | 13.64 | 10.68 |
| KRH14098 | Soybean | nucleus | 17.83 | 10.65 |
| KRH77004 | Soybean | nucleus | 13.29 | 10.5 |
| KRH14284 | Soybean | nucleus | 17.48 | 10.46 |
| KRG98573 | Soybean | nucleus | 17.48 | 10.44 |
| KRH52137 | Soybean | nucleus | 13.64 | 10.32 |
| KRH46297 | Soybean | nucleus | 17.13 | 10.23 |
| KRH14673 | Soybean | nucleus | 17.13 | 9.92 |
| KRH73477 | Soybean | nucleus | 16.78 | 9.68 |
| KRH61448 | Soybean | nucleus | 12.94 | 9.64 |
| KRH34534 | Soybean | nucleus | 15.73 | 9.55 |
| KRG92276 | Soybean | endoplasmic reticulum | 15.73 | 9.45 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 8.39 | 7.41 |
Protein Annotations
| EntrezGene:100782484 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02004163 | EnsemblPlantsGene:GLYMA_07G050000 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | UniProt:K7KZQ6 |
| EnsemblPlants:KRH47808 | ProteinID:KRH47808 | ProteinID:KRH47808.1 | ProteinID:KRH47809.1 | ProteinID:KRH47810.1 | InterPro:Nucleotide-bd_a/b_plait_sf |
| PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44374 | PANTHER:PTHR44374:SF3 | InterPro:RBD_domain_sf | InterPro:RRM_dom |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI000295CFCB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:4250197..4251961
Molecular Weight (calculated)
30979.1 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.437
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGDNINSRQ YNIDINSTKI FVGGLAWETQ RDTMRRYFEQ FGEILEAVVI TDKNTLKSKG YGFVTFKDPE AAMKACQNPS PIIDGRRANC NIASIGANKN
101: RTRAPQHQHG RSRAAPGVLA SPAYHGTSST FVHQNSGQYT FPNSSFGYTG YSQGTIYPLS CYGVFGGQQI STYYPSNGAS GQVGLVHNIY PFSAQYSYNS
201: HSHGFGVQYP QMMQFPILPR HYGSAGILAL PSSMPMPNIS AAVTTTATTT TAEAIRTSVG TSQTAGTTSE QNSSAESLHR QTHDAL
101: RTRAPQHQHG RSRAAPGVLA SPAYHGTSST FVHQNSGQYT FPNSSFGYTG YSQGTIYPLS CYGVFGGQQI STYYPSNGAS GQVGLVHNIY PFSAQYSYNS
201: HSHGFGVQYP QMMQFPILPR HYGSAGILAL PSSMPMPNIS AAVTTTATTT TAEAIRTSVG TSQTAGTTSE QNSSAESLHR QTHDAL
001: MEDTTFTKVF VGGLAWETHK VSLRNYFEQF GDIVEAVVIT DKSSGRSKGY GFVTFCDPEA AQKACVDPAP VIDGRRANCN LAAFGVQRSK PSSPIHGHVG
101: GRGMKVTSPF KTHFGTAATA IPSPLPFSHY TLPYTNPFGF SSYSMDYNYP TSYYNVYGGA TAQHPMYGSG PMTGVAAAPA AGFYPYLQFA EGNGPVTGYA
201: PLHYPNHMFH YSAPGGNYPH HNGSPVSLAP SPVIPSVCFA VPQA
101: GRGMKVTSPF KTHFGTAATA IPSPLPFSHY TLPYTNPFGF SSYSMDYNYP TSYYNVYGGA TAQHPMYGSG PMTGVAAAPA AGFYPYLQFA EGNGPVTGYA
201: PLHYPNHMFH YSAPGGNYPH HNGSPVSLAP SPVIPSVCFA VPQA
Arabidopsis Description
RNA-binding (RRM/RBD/RNP motifs) family protein [Source:UniProtKB/TrEMBL;Acc:Q67YS0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.