Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG95365 | Soybean | nucleus | 91.18 | 92.26 |
| VIT_08s0007g06300.t01 | Wine grape | nucleus | 69.12 | 68.71 |
| GSMUA_Achr9P12410_001 | Banana | nucleus | 62.35 | 63.28 |
| KRH75298 | Soybean | cytosol, nucleus | 10.29 | 35.35 |
| KRH13261 | Soybean | cytosol | 12.65 | 34.68 |
| KRH71299 | Soybean | nucleus | 33.82 | 29.95 |
| KRH50169 | Soybean | nucleus | 33.82 | 29.95 |
| KRH26210 | Soybean | nucleus | 35.59 | 27.69 |
| KRH07772 | Soybean | cytosol | 7.94 | 27.55 |
| KRH55109 | Soybean | nucleus | 35.88 | 27.48 |
| KRH56541 | Soybean | nucleus | 14.41 | 24.5 |
| KRH60871 | Soybean | nucleus, plastid | 18.24 | 21.68 |
| KRH62942 | Soybean | mitochondrion | 12.94 | 21.57 |
| KRH51553 | Soybean | nucleus, plastid | 17.94 | 21.33 |
| KRH40033 | Soybean | nucleus | 17.06 | 21.32 |
| KRH64318 | Soybean | nucleus | 15.88 | 21.01 |
| KRH23771 | Soybean | nucleus | 16.76 | 20.96 |
| KRH66628 | Soybean | nucleus | 29.41 | 20.58 |
| KRG94993 | Soybean | nucleus | 28.53 | 20.25 |
| KRH16743 | Soybean | nucleus | 16.18 | 20.07 |
| KRH53608 | Soybean | nucleus | 14.41 | 19.92 |
| KRH18921 | Soybean | nucleus | 15.88 | 19.57 |
| KRH73477 | Soybean | nucleus | 28.24 | 19.35 |
| KRH14673 | Soybean | nucleus | 27.94 | 19.23 |
| KRH62327 | Soybean | nucleus | 16.18 | 19.16 |
| KRH47731 | Soybean | nucleus | 15.0 | 19.1 |
| KRH06306 | Soybean | nucleus | 15.0 | 18.96 |
| KRH53044 | Soybean | nucleus | 15.88 | 18.82 |
| KRH06373 | Soybean | nucleus | 15.0 | 18.41 |
| KRH47819 | Soybean | nucleus | 15.88 | 18.24 |
| KRH06384 | Soybean | nucleus | 15.88 | 17.94 |
| KRH47808 | Soybean | nucleus | 14.71 | 17.48 |
| KRG94084 | Soybean | nucleus | 19.12 | 17.38 |
| KRH17717 | Soybean | nucleus | 17.94 | 17.33 |
| KRH07154 | Soybean | nucleus | 18.82 | 17.2 |
| KRG93213 | Soybean | nucleus | 18.82 | 16.98 |
| KRH23293 | Soybean | nucleus | 17.06 | 16.43 |
| KRH52137 | Soybean | nucleus | 17.06 | 15.34 |
| KRH61448 | Soybean | nucleus | 17.06 | 15.1 |
| KRG98573 | Soybean | nucleus | 20.29 | 14.4 |
| KRG92276 | Soybean | endoplasmic reticulum | 20.0 | 14.29 |
| KRH34534 | Soybean | nucleus | 19.71 | 14.23 |
| KRH46297 | Soybean | nucleus | 20.0 | 14.2 |
| KRH28467 | Soybean | cytosol | 15.0 | 13.97 |
| KRH74025 | Soybean | nucleus | 19.41 | 13.89 |
| KRH14098 | Soybean | nucleus | 19.41 | 13.78 |
| KRH73860 | Soybean | nucleus | 19.12 | 13.63 |
| KRH14284 | Soybean | nucleus | 19.12 | 13.6 |
| KRH77004 | Soybean | nucleus | 14.41 | 13.54 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 12.35 | 12.96 |
Protein Annotations
| EntrezGene:100776344 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02002025 | EMBL:BT093415 | UniProt:C6T7I3 |
| EnsemblPlantsGene:GLYMA_03G143400 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 |
| InterPro:IPR012677 | EnsemblPlants:KRH67043 | ProteinID:KRH67043 | ProteinID:KRH67043.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 |
| PFscan:PS50102 | PANTHER:PTHR44678 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 |
| UniParc:UPI0001B15ACD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:35910743..35914919
Molecular Weight (calculated)
37297.2 Da
IEP (calculated)
8.126
GRAVY (calculated)
-0.512
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDFKKRKLE LDEAGGDGDF SSKEELRFLI EPLAKPQLVD LLAKLGSQYP SIAEEIKSIA SADPAHRKLF VRGLAWNTTS ETLRAAFQEH GEIEEGAVIY
101: DKVTGKSRGY GFITFKNMES TQQALRAPSK LIDGRLAVCN LACESLSGTS SAPDLSLRKL YIGSLSPEVT SEILLNYFAR HGEIEEGSVA YDRDTNESRG
201: FGFVTYKTAE AAKKAIDDLE KTLGGRNIVV KYADSQKGKT GQPPFPAGVV PMAALPMNPG YMQQPGKANV SSRPPINYSY PQTVAPYSAL PYPNPPTAPS
301: PYPTQGQIPY PQVSAKKDRH GFLPTQPVGM NNYPYYYPKQ
101: DKVTGKSRGY GFITFKNMES TQQALRAPSK LIDGRLAVCN LACESLSGTS SAPDLSLRKL YIGSLSPEVT SEILLNYFAR HGEIEEGSVA YDRDTNESRG
201: FGFVTYKTAE AAKKAIDDLE KTLGGRNIVV KYADSQKGKT GQPPFPAGVV PMAALPMNPG YMQQPGKANV SSRPPINYSY PQTVAPYSAL PYPNPPTAPS
301: PYPTQGQIPY PQVSAKKDRH GFLPTQPVGM NNYPYYYPKQ
001: MDMMKKRKLD ENGNGLNTNG GGTIGPTRLS PQDARKIIER FTTDQLLDLL QEAIVRHPDV LESVRLTADS DISQRKLFIR GLAADTTTEG LRSLFSSYGD
101: LEEAIVILDK VTGKSKGYGF VTFMHVDGAL LALKEPSKKI DGRVTVTQLA ASGNQGTGSQ IADISMRKIY VANVPFDMPA DRLLNHFMAY GDVEEGPLGF
201: DKVTGKSRGF ALFVYKTAEG AQAALADPVK VIDGKHLNCK LAVDGKKGGK PGMPQAQDGG SGHGHVHGEG MGMVRPAGPY GAAGGISAYG GYSGGPPAHH
301: MNSTHSSMGV GSAGYGGHYG GYGGPGGTGV YGGLGGGYGG PGTGSGQYRM PPSSMPGGGG YPESGHYGLS SSAGYPGQHH QAVGTSPVPR VPHGGMYPNG
401: PPNY
101: LEEAIVILDK VTGKSKGYGF VTFMHVDGAL LALKEPSKKI DGRVTVTQLA ASGNQGTGSQ IADISMRKIY VANVPFDMPA DRLLNHFMAY GDVEEGPLGF
201: DKVTGKSRGF ALFVYKTAEG AQAALADPVK VIDGKHLNCK LAVDGKKGGK PGMPQAQDGG SGHGHVHGEG MGMVRPAGPY GAAGGISAYG GYSGGPPAHH
301: MNSTHSSMGV GSAGYGGHYG GYGGPGGTGV YGGLGGGYGG PGTGSGQYRM PPSSMPGGGG YPESGHYGLS SSAGYPGQHH QAVGTSPVPR VPHGGMYPNG
401: PPNY
Arabidopsis Description
UBA2CUBP1-associated protein 2C [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.