Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28467 | Soybean | cytosol | 96.69 | 95.89 |
| VIT_07s0031g00600.t01 | Wine grape | cytosol | 82.04 | 82.73 |
| GSMUA_Achr4P24260_001 | Banana | cytosol | 69.61 | 76.6 |
| PGSC0003DMT400010280 | Potato | cytosol | 77.9 | 76.01 |
| Solyc02g090910.2.1 | Tomato | nucleus | 77.9 | 75.0 |
| GSMUA_Achr2P14710_001 | Banana | cytosol | 72.38 | 72.98 |
| CDY42724 | Canola | cytosol | 74.31 | 70.98 |
| AT4G36960.2 | Thale cress | cytosol | 74.31 | 70.98 |
| CDY69852 | Canola | cytosol | 74.31 | 70.42 |
| Zm00001d011885_P008 | Maize | cytosol | 69.06 | 69.44 |
| KXG34100 | Sorghum | cytosol | 67.68 | 68.06 |
| Os01t0945800-01 | Rice | nucleus | 67.96 | 67.77 |
| HORVU1Hr1G057660.1 | Barley | cytosol | 67.4 | 67.03 |
| Os05t0376000-00 | Rice | cytosol | 38.67 | 66.99 |
| TraesCS1B01G249300.1 | Wheat | cytosol | 66.85 | 66.3 |
| TraesCS1A01G234200.1 | Wheat | cytosol | 66.85 | 66.3 |
| TraesCS1D01G237800.3 | Wheat | cytosol | 66.57 | 66.21 |
| Bra017802.1-P | Field mustard | nucleus | 73.48 | 65.2 |
| TraesCS3B01G532600.3 | Wheat | cytosol | 57.46 | 55.76 |
| TraesCS3A01G485000.1 | Wheat | cytosol | 56.35 | 54.69 |
| TraesCS3D01G480300.1 | Wheat | cytosol | 56.08 | 54.42 |
| HORVU3Hr1G105930.10 | Barley | cytoskeleton, cytosol, nucleus | 54.97 | 53.64 |
| Zm00001d042133_P003 | Maize | cytosol | 55.25 | 50.25 |
| CDX69279 | Canola | nucleus | 25.41 | 38.98 |
| KRH56541 | Soybean | nucleus | 14.92 | 27.0 |
| KRH23293 | Soybean | nucleus | 25.97 | 26.63 |
| KRH07772 | Soybean | cytosol | 6.91 | 25.51 |
| KRH17717 | Soybean | nucleus | 24.59 | 25.28 |
| KRH07154 | Soybean | nucleus | 24.86 | 24.19 |
| KRG94084 | Soybean | nucleus | 24.86 | 24.06 |
| KRG98573 | Soybean | nucleus | 30.39 | 22.96 |
| KRH73860 | Soybean | nucleus | 30.11 | 22.85 |
| KRH46297 | Soybean | nucleus | 30.11 | 22.76 |
| KRG93213 | Soybean | nucleus | 23.48 | 22.55 |
| KRH34534 | Soybean | nucleus | 29.28 | 22.51 |
| KRH14284 | Soybean | nucleus | 29.56 | 22.38 |
| KRH74025 | Soybean | nucleus | 29.28 | 22.32 |
| KRH75298 | Soybean | cytosol, nucleus | 6.08 | 22.22 |
| KRH14098 | Soybean | nucleus | 29.28 | 22.13 |
| KRG92276 | Soybean | endoplasmic reticulum | 28.73 | 21.85 |
| KRH52137 | Soybean | nucleus | 21.82 | 20.9 |
| KRH13261 | Soybean | cytosol | 6.91 | 20.16 |
| KRH61448 | Soybean | nucleus | 20.99 | 19.79 |
| KRH05541 | Soybean | cytosol, endoplasmic reticulum | 16.57 | 18.52 |
| KRH23771 | Soybean | nucleus | 13.81 | 18.38 |
| KRH40033 | Soybean | nucleus | 13.26 | 17.65 |
| KRH53608 | Soybean | nucleus | 11.6 | 17.07 |
| KRH50169 | Soybean | nucleus | 17.96 | 16.93 |
| KRH51553 | Soybean | nucleus, plastid | 12.98 | 16.43 |
| KRH60871 | Soybean | nucleus, plastid | 12.98 | 16.43 |
| KRH71299 | Soybean | nucleus | 17.4 | 16.41 |
| KRH64318 | Soybean | nucleus | 11.6 | 16.34 |
| KRH16743 | Soybean | nucleus | 12.15 | 16.06 |
| KRH26210 | Soybean | nucleus | 19.06 | 15.79 |
| KRH55109 | Soybean | nucleus | 19.34 | 15.77 |
| KRH18921 | Soybean | nucleus | 11.88 | 15.58 |
| KRH62327 | Soybean | nucleus | 11.88 | 14.98 |
| KRH53044 | Soybean | nucleus | 11.6 | 14.63 |
| KRH06384 | Soybean | nucleus | 12.15 | 14.62 |
| KRH06373 | Soybean | nucleus | 11.05 | 14.44 |
| KRH67043 | Soybean | nucleus | 13.54 | 14.41 |
| KRG95365 | Soybean | nucleus | 13.26 | 14.29 |
| KRH62942 | Soybean | mitochondrion | 8.01 | 14.22 |
| KRH47819 | Soybean | nucleus | 11.6 | 14.19 |
| KRH73477 | Soybean | nucleus | 19.34 | 14.11 |
| KRH14673 | Soybean | nucleus | 19.06 | 13.97 |
| KRH06306 | Soybean | nucleus | 9.94 | 13.38 |
| KRH47808 | Soybean | nucleus | 10.5 | 13.29 |
| KRG94993 | Soybean | nucleus | 17.13 | 12.94 |
| KRH66628 | Soybean | nucleus | 17.13 | 12.76 |
| KRH47731 | Soybean | nucleus | 9.39 | 12.73 |
Protein Annotations
| EntrezGene:100795240 | Gene3D:3.30.70.330 | MapMan:35.1 | EMBL:ACUP02000650 | EnsemblPlantsGene:GLYMA_01G186400 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | UniProt:I1J971 | InterPro:IPR000504 | InterPro:IPR012677 |
| EnsemblPlants:KRH77004 | ProteinID:KRH77004 | ProteinID:KRH77004.1 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 |
| PANTHER:PTHR45519 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002336FDA |
Description
hypothetical protein
Coordinates
chr1:-:52177510..52182167
Molecular Weight (calculated)
40327.7 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.528
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQRKLVVLG IPWDIDTEGL REYMSKFGEL EDCIVMKERS TGRSRGFGYV TFASVDDAKE VLSSEHILGN RTLEVKVATP KEEMRAPVKK VTRIFVARIP
101: QSVTEATFRS HFEKYGEITD LYMPKDQGSK MHRGIGFITF ASADSVENLM SETHELGGSA VVVDRATPKD DDFKPIGRMP LPPPTQGGYG AYNAYISAAT
201: RYAALGAPTL YDQPGPIYGR GDPSRRTSKK IFVGRLPPEA TSDDLRQYFG RFGRILDVYV PRDPKRTGHR GFGFVTFAED GVADRVSRRS HEICGHQVAI
301: DSATPVDDAG PSGNFMMNSM ESFGGYGGPV RSYGRMYGSL DFDDWGYGIG RPSRADWRYR PY
101: QSVTEATFRS HFEKYGEITD LYMPKDQGSK MHRGIGFITF ASADSVENLM SETHELGGSA VVVDRATPKD DDFKPIGRMP LPPPTQGGYG AYNAYISAAT
201: RYAALGAPTL YDQPGPIYGR GDPSRRTSKK IFVGRLPPEA TSDDLRQYFG RFGRILDVYV PRDPKRTGHR GFGFVTFAED GVADRVSRRS HEICGHQVAI
301: DSATPVDDAG PSGNFMMNSM ESFGGYGGPV RSYGRMYGSL DFDDWGYGIG RPSRADWRYR PY
001: MERKLVVLGI PWDIDSDGLK DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASAEDAKNA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPS
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
Arabidopsis Description
AT4g36960/C7A10_400 [Source:UniProtKB/TrEMBL;Acc:Q94AC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.