Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69852 | Canola | cytosol | 99.47 | 98.69 |
| AT4G36960.2 | Thale cress | cytosol | 92.35 | 92.35 |
| Bra017802.1-P | Field mustard | nucleus | 98.42 | 91.42 |
| VIT_07s0031g00600.t01 | Wine grape | cytosol | 70.45 | 74.37 |
| KRH77004 | Soybean | nucleus | 70.98 | 74.31 |
| KRH28467 | Soybean | cytosol | 70.18 | 72.88 |
| CDX69277 | Canola | mitochondrion | 35.09 | 71.51 |
| PGSC0003DMT400010280 | Potato | cytosol | 69.66 | 71.16 |
| GSMUA_Achr4P24260_001 | Banana | cytosol | 60.95 | 70.21 |
| Solyc02g090910.2.1 | Tomato | nucleus | 69.39 | 69.95 |
| GSMUA_Achr2P14710_001 | Banana | cytosol | 64.12 | 67.69 |
| Zm00001d011885_P008 | Maize | cytosol | 63.85 | 67.22 |
| KXG34100 | Sorghum | cytosol | 63.32 | 66.67 |
| Os01t0945800-01 | Rice | nucleus | 63.85 | 66.67 |
| Os05t0376000-00 | Rice | cytosol | 35.62 | 64.59 |
| HORVU1Hr1G057660.1 | Barley | cytosol | 60.69 | 63.19 |
| TraesCS1D01G237800.3 | Wheat | cytosol | 60.42 | 62.91 |
| TraesCS1B01G249300.1 | Wheat | cytosol | 60.42 | 62.74 |
| TraesCS1A01G234200.1 | Wheat | cytosol | 59.89 | 62.19 |
| TraesCS3B01G532600.3 | Wheat | cytosol | 53.83 | 54.69 |
| TraesCS3A01G485000.1 | Wheat | cytosol | 53.56 | 54.42 |
| TraesCS3D01G480300.1 | Wheat | cytosol | 53.56 | 54.42 |
| HORVU3Hr1G105930.10 | Barley | cytoskeleton, cytosol, nucleus | 53.03 | 54.18 |
| Zm00001d042133_P003 | Maize | cytosol | 52.77 | 50.25 |
| CDX69279 | Canola | nucleus | 28.23 | 45.34 |
| CDY67299 | Canola | nucleus | 26.12 | 25.98 |
| CDX75170 | Canola | extracellular | 11.08 | 25.77 |
| CDY23739 | Canola | nucleus | 25.86 | 25.59 |
| CDY17173 | Canola | nucleus | 25.07 | 25.2 |
| CDY12068 | Canola | nucleus | 23.75 | 25.14 |
| CDY48318 | Canola | nucleus | 24.54 | 25.0 |
| CDY37724 | Canola | nucleus | 21.11 | 24.77 |
| CDY26229 | Canola | nucleus | 24.01 | 24.53 |
| CDX79527 | Canola | nucleus | 26.12 | 24.38 |
| CDY51790 | Canola | cytosol | 6.86 | 24.3 |
| CDY28822 | Canola | cytosol, nucleus, plastid | 7.12 | 24.11 |
| CDX90262 | Canola | nucleus | 24.27 | 24.08 |
| CDX84689 | Canola | nucleus | 25.33 | 23.53 |
| CDY24201 | Canola | nucleus | 21.64 | 22.65 |
| CDY43360 | Canola | nucleus | 21.64 | 22.65 |
| CDY41059 | Canola | nucleus | 24.54 | 21.78 |
| CDY17719 | Canola | cytoskeleton, cytosol, nucleus | 23.75 | 21.69 |
| CDY07975 | Canola | nucleus | 26.91 | 21.66 |
| CDX77783 | Canola | nucleus | 24.27 | 21.65 |
| CDX74030 | Canola | nucleus | 26.65 | 21.4 |
| CDY42061 | Canola | cytosol, nucleus, plastid | 20.32 | 21.21 |
| CDY46690 | Canola | nucleus | 23.75 | 21.03 |
| CDY22136 | Canola | nucleus | 26.91 | 20.99 |
| CDY50131 | Canola | nucleus | 20.84 | 20.68 |
| CDY66272 | Canola | nucleus | 26.65 | 20.65 |
| CDY35966 | Canola | nucleus | 26.91 | 20.65 |
| CDY48851 | Canola | cytosol, nucleus, peroxisome | 19.53 | 20.33 |
| CDX73279 | Canola | cytosol | 12.93 | 20.25 |
| CDX92807 | Canola | nucleus | 24.01 | 20.22 |
| CDX94301 | Canola | nucleus | 23.48 | 20.14 |
| CDY46689 | Canola | nucleus | 24.54 | 20.09 |
| CDY45879 | Canola | cytosol, nucleus, plastid | 18.21 | 19.94 |
| CDY31508 | Canola | nucleus | 12.93 | 19.6 |
| CDY44555 | Canola | cytosol, nucleus, plastid | 18.73 | 19.56 |
| CDX89316 | Canola | endoplasmic reticulum | 22.69 | 19.24 |
| CDY58169 | Canola | cytosol, nucleus, plasma membrane | 20.84 | 19.22 |
| CDY69197 | Canola | nucleus | 11.35 | 19.11 |
| CDY36753 | Canola | nucleus | 21.9 | 19.08 |
| CDY04769 | Canola | nucleus | 11.87 | 18.99 |
| CDY11989 | Canola | nucleus | 21.37 | 18.75 |
| CDY31859 | Canola | nucleus | 11.87 | 18.67 |
| CDY29496 | Canola | nucleus | 12.66 | 18.39 |
| CDY28918 | Canola | mitochondrion | 23.48 | 18.39 |
| CDY01349 | Canola | nucleus | 11.61 | 18.26 |
| CDX96615 | Canola | nucleus | 12.14 | 18.25 |
| CDY55846 | Canola | nucleus | 19.0 | 17.96 |
| CDY33653 | Canola | nucleus | 11.61 | 17.39 |
| CDY25759 | Canola | nucleus | 11.35 | 17.27 |
| CDY26001 | Canola | nucleus | 18.47 | 17.2 |
| CDX88283 | Canola | nucleus | 12.66 | 17.14 |
| CDY25957 | Canola | nucleus | 24.8 | 17.0 |
| CDY24106 | Canola | nucleus | 18.47 | 16.95 |
| CDY41556 | Canola | nucleus | 12.93 | 16.9 |
| CDY25867 | Canola | nucleus | 17.94 | 16.79 |
| CDY02889 | Canola | nucleus | 9.23 | 16.13 |
| CDY36357 | Canola | nucleus | 22.96 | 16.05 |
| CDY42577 | Canola | nucleus | 22.96 | 15.96 |
| CDX80046 | Canola | nucleus | 12.93 | 15.51 |
| CDY41557 | Canola | nucleus | 12.93 | 15.51 |
| CDY64698 | Canola | nucleus | 10.55 | 15.33 |
| CDX87594 | Canola | nucleus | 12.93 | 15.31 |
| CDX73451 | Canola | cytosol | 10.03 | 15.2 |
| CDX68024 | Canola | nucleus | 11.35 | 15.19 |
| CDX87460 | Canola | nucleus | 11.35 | 15.09 |
| CDY13782 | Canola | nucleus | 12.14 | 14.98 |
| CDY13339 | Canola | mitochondrion | 6.6 | 14.88 |
| CDX88432 | Canola | nucleus | 11.08 | 14.79 |
| CDX79253 | Canola | nucleus | 10.82 | 14.64 |
| CDY27523 | Canola | nucleus | 12.4 | 14.55 |
| CDY21356 | Canola | nucleus | 11.08 | 14.48 |
| CDY06947 | Canola | nucleus | 16.36 | 14.42 |
| CDY48016 | Canola | nucleus | 12.4 | 14.42 |
| CDX72106 | Canola | nucleus | 17.15 | 14.29 |
| CDX76950 | Canola | nucleus | 11.61 | 14.29 |
| CDX78261 | Canola | nucleus | 9.76 | 14.29 |
| CDY27186 | Canola | nucleus | 16.89 | 14.25 |
| CDY46642 | Canola | nucleus | 10.82 | 14.19 |
| CDX76015 | Canola | nucleus | 11.35 | 14.1 |
| CDY57580 | Canola | nucleus | 16.36 | 14.0 |
| CDY21399 | Canola | mitochondrion | 5.28 | 13.79 |
| CDY67263 | Canola | nucleus | 11.87 | 13.72 |
| CDY40554 | Canola | nucleus | 23.48 | 13.57 |
| CDY08023 | Canola | nucleus | 12.66 | 13.33 |
| CDX74070 | Canola | cytosol | 12.14 | 12.78 |
| CDY00446 | Canola | nucleus | 10.82 | 12.06 |
| CDY05301 | Canola | nucleus | 11.08 | 11.97 |
| CDY24657 | Canola | nucleus | 10.55 | 11.76 |
| CDY15850 | Canola | nucleus | 10.82 | 11.08 |
| CDY47382 | Canola | golgi, plastid | 10.82 | 9.86 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078HZE3 | UniProt:A0A078HZE3 | EnsemblPlants:CDY42724 | ProteinID:CDY42724 |
| ProteinID:CDY42724.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00075263001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR45519 |
| InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EEB675 | SEG:seg |
Description
BnaA03g53770DBnaA03g53770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZE3]
Coordinates
chrLK032532:-:260881..263337
Molecular Weight (calculated)
41553.7 Da
IEP (calculated)
8.167
GRAVY (calculated)
-0.562
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKLVVLGI PWEIDSDGLR DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASSQDAKEA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPP
101: SVSESDFRRH FEKYGEITDL YMPKDHNSKQ HRGIGFITFA TSVEDLMEDT HDLGGTTVAV DRATPKEDDP PPRPPPAARM QRPPVAVAGG FGAPGGYGAY
201: DAYISAATRY AALGAPTLYD NAASFYGRAE PTRGIGNKIF VGRLPQEASV DDLRDYFGRF GRIQDAYIPK DPKRSGHRGF GFVTFAENGV ADRVARRSHE
301: ICGQEVAIDS ATPLDEAGPS AGGSSTLSSS SRPEYFGGYG GGPVRAFGRM YGGAMSLDDW GYGVPSARPS RSDWRYRPY
101: SVSESDFRRH FEKYGEITDL YMPKDHNSKQ HRGIGFITFA TSVEDLMEDT HDLGGTTVAV DRATPKEDDP PPRPPPAARM QRPPVAVAGG FGAPGGYGAY
201: DAYISAATRY AALGAPTLYD NAASFYGRAE PTRGIGNKIF VGRLPQEASV DDLRDYFGRF GRIQDAYIPK DPKRSGHRGF GFVTFAENGV ADRVARRSHE
301: ICGQEVAIDS ATPLDEAGPS AGGSSTLSSS SRPEYFGGYG GGPVRAFGRM YGGAMSLDDW GYGVPSARPS RSDWRYRPY
001: MERKLVVLGI PWDIDSDGLK DYMSKFGDLE DCIVMKDRST GRSRGFGYVT FASAEDAKNA LKGEHFLGNR ILEVKVATPK EEMRQPAKKV TRIFVARIPS
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
101: SVSESDFRSH FERYGEITDL YMPKDYNSKQ HRGIGFITFS SADSVEDLME DTHDLGGTTV AVDRATPKED DHPPRPPPVA RMSRPPVAIA GGFGAPGGYG
201: AYDAYISAAT RYAALGAPTL YDNPATFYGR GEPTTRGIGN KIFVGRLPQE ASVDDLRDYF GRFGHIQDAY IPKDPKRSGH RGFGFVTFAE NGVADRVARR
301: SHEICGQEVA IDSATPLDEA GPSAGASSML SSSRPEYFGG YGGPMRAFGR MYGGMSLDDW GYGMPNARPS RPDRRYRPY
Arabidopsis Description
AT4g36960/C7A10_400 [Source:UniProtKB/TrEMBL;Acc:Q94AC3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.